RNA–Protein interactions for RNA: ENST00000558745.5

TSPAN3-205, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,340 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-205ENST00000558745 LINC00854A0A1B0GVQ3 168 aa10.63□□□□□ -0.71
TSPAN3-205ENST00000558745 NPIPB5A8MRT5 1133 aa10.63□□□□□ -0.71
TSPAN3-205ENST00000558745 SEC14L6B5MCN3 397 aa10.63□□□□□ -0.71
TSPAN3-205ENST00000558745 SNAPC5O75971 98 aa10.63□□□□□ -0.71
TSPAN3-205ENST00000558745 OR5AC1P0C628 307 aa10.63□□□□□ -0.71
TSPAN3-205ENST00000558745 TRAPPC2P0DI81 140 aa10.63□□□□□ -0.71
TSPAN3-205ENST00000558745 TRAPPC2BP0DI82 140 aa10.63□□□□□ -0.71
TSPAN3-205ENST00000558745 OR13C7P0DN81 318 aa10.63□□□□□ -0.71
TSPAN3-205ENST00000558745 ATP5G2Q06055 141 aa10.63□□□□□ -0.71
TSPAN3-205ENST00000558745 WT1-ASQ06250 92 aa10.63□□□□□ -0.71
TSPAN3-205ENST00000558745 TRIM16LQ309B1 348 aa10.63□□□□□ -0.71
TSPAN3-205ENST00000558745 SPINK9Q5DT21 86 aa10.63□□□□□ -0.71
TSPAN3-205ENST00000558745 ZNF343Q6P1L6 599 aa10.63□□□□□ -0.71
TSPAN3-205ENST00000558745 H2BFWTQ7Z2G1 175 aa10.63□□□□□ -0.71
TSPAN3-205ENST00000558745 LHFPL5Q8TAF8 219 aa10.63□□□□□ -0.71
TSPAN3-205ENST00000558745 TMEM230Q96A57 120 aa10.63□□□□□ -0.71
TSPAN3-205ENST00000558745 QTRT1Q9BXR0 403 aaKnown RBP10.63□□□□□ -0.71
TSPAN3-205ENST00000558745 NAA60Q9H7X0 242 aa10.63□□□□□ -0.71
TSPAN3-205ENST00000558745 NDUFA4L2Q9NRX3 87 aa10.63□□□□□ -0.71
TSPAN3-205ENST00000558745 FAM212BQ9NTI7 297 aaPredicted RBP10.63□□□□□ -0.71
TSPAN3-205ENST00000558745 SCP2D1Q9UJQ7 156 aa10.63□□□□□ -0.71
TSPAN3-205ENST00000558745 FBXL7Q9UJT9 491 aa10.63□□□□□ -0.71
TSPAN3-205ENST00000558745 ZNF257Q9Y2Q1 563 aa10.63□□□□□ -0.71
TSPAN3-205ENST00000558745 TEX13DA0A0J9YY54 714 aaPredicted RBP10.62□□□□□ -0.71
TSPAN3-205ENST00000558745 A6NHS1 94 aa10.62□□□□□ -0.71
TSPAN3-205ENST00000558745 OVOL1O14753 267 aa10.62□□□□□ -0.71
TSPAN3-205ENST00000558745 SURF2Q15527 256 aaPredicted RBP10.62□□□□□ -0.71
TSPAN3-205ENST00000558745 C15orf32Q32M92 178 aa10.62□□□□□ -0.71
TSPAN3-205ENST00000558745 ZNF57Q68EA5 555 aaPredicted RBP10.62□□□□□ -0.71
TSPAN3-205ENST00000558745 SLC25A42Q86VD7 318 aa10.62□□□□□ -0.71
TSPAN3-205ENST00000558745 GDPD1Q8N9F7 314 aa10.62□□□□□ -0.71
TSPAN3-205ENST00000558745 OR1L8Q8NGR8 309 aa10.62□□□□□ -0.71
TSPAN3-205ENST00000558745 OR4A16Q8NH70 328 aa10.62□□□□□ -0.71
TSPAN3-205ENST00000558745 GLYATL2Q8WU03 294 aa10.62□□□□□ -0.71
TSPAN3-205ENST00000558745 USMG5Q96IX5 58 aa10.62□□□□□ -0.71
TSPAN3-205ENST00000558745 RANGRFQ9HD47 186 aaPredicted RBP10.62□□□□□ -0.71
TSPAN3-205ENST00000558745 AURKAIP1Q9NWT8 199 aaPredicted RBP10.62□□□□□ -0.71
TSPAN3-205ENST00000558745 SLC2A8Q9NY64 477 aa10.62□□□□□ -0.71
TSPAN3-205ENST00000558745 PEF1Q9UBV8 284 aaKnown RBP10.62□□□□□ -0.71
TSPAN3-205ENST00000558745 IGHV3-21A0A0B4J1V1 117 aa10.61□□□□□ -0.71
TSPAN3-205ENST00000558745 A0A0B4J293 547 aa10.61□□□□□ -0.71
TSPAN3-205ENST00000558745 CRYM-AS1A6NIL9 109 aa10.61□□□□□ -0.71
TSPAN3-205ENST00000558745 C15orf61A6NNL5 157 aa10.61□□□□□ -0.71
TSPAN3-205ENST00000558745 DUS4LO95620 317 aaKnown RBP10.61□□□□□ -0.71
TSPAN3-205ENST00000558745 DEFA4P12838 97 aa10.61□□□□□ -0.71
TSPAN3-205ENST00000558745 AKR1C4P17516 323 aa10.61□□□□□ -0.71
TSPAN3-205ENST00000558745 UCP1P25874 307 aa10.61□□□□□ -0.71
TSPAN3-205ENST00000558745 ECI1P42126 302 aa10.61□□□□□ -0.71
TSPAN3-205ENST00000558745 EXOSC2Q13868 293 aaKnown RBP10.61□□□□□ -0.71
TSPAN3-205ENST00000558745 Q6ZRM9 215 aa10.61□□□□□ -0.71
TSPAN3-205ENST00000558745 SELENOHQ8IZQ5 122 aaKnown RBP10.61□□□□□ -0.71
TSPAN3-205ENST00000558745 NECAP1Q8NC96 275 aa10.61□□□□□ -0.71
TSPAN3-205ENST00000558745 MCRIP2Q9BUT9 160 aaKnown RBP10.61□□□□□ -0.71
TSPAN3-205ENST00000558745 PRNDQ9UKY0 176 aa10.61□□□□□ -0.71
TSPAN3-205ENST00000558745 IGLV11-55A0A075B6I3 123 aa10.6□□□□□ -0.71
TSPAN3-205ENST00000558745 WI2-2373I1.2A0A1W2PRP0 233 aa10.6□□□□□ -0.71
TSPAN3-205ENST00000558745 PPP5D1E7EU14 171 aa10.6□□□□□ -0.71
TSPAN3-205ENST00000558745 HLA-AP01891 365 aaKnown RBP10.6□□□□□ -0.71
TSPAN3-205ENST00000558745 P0C879 139 aa10.6□□□□□ -0.71
TSPAN3-205ENST00000558745 MFAP2P55001 183 aa10.6□□□□□ -0.71
TSPAN3-205ENST00000558745 CNPY1Q3B7I2 92 aa10.6□□□□□ -0.71
TSPAN3-205ENST00000558745 HAPLN4Q86UW8 402 aa10.6□□□□□ -0.71
TSPAN3-205ENST00000558745 CADM3Q8N126 398 aa10.6□□□□□ -0.71
TSPAN3-205ENST00000558745 TMEM222Q9H0R3 208 aa10.6□□□□□ -0.71
TSPAN3-205ENST00000558745 ZC4H2Q9NQZ6 224 aa10.6□□□□□ -0.71
TSPAN3-205ENST00000558745 TMEM14BQ9NUH8 114 aa10.6□□□□□ -0.71
TSPAN3-205ENST00000558745 MFSD2BA6NFX1 497 aa10.59□□□□□ -0.71
TSPAN3-205ENST00000558745 FAM223BA6NKX1 122 aa10.59□□□□□ -0.71
TSPAN3-205ENST00000558745 BMPR1BO00238 502 aa10.59□□□□□ -0.71
TSPAN3-205ENST00000558745 CDS2O95674 445 aa10.59□□□□□ -0.71
TSPAN3-205ENST00000558745 FAUP35544 74 aaKnown RBP10.59□□□□□ -0.71
TSPAN3-205ENST00000558745 MECP2P51608 486 aaKnown RBP10.59□□□□□ -0.71
TSPAN3-205ENST00000558745 CCR6P51684 374 aa10.59□□□□□ -0.71
TSPAN3-205ENST00000558745 AKR1C2P52895 323 aa10.59□□□□□ -0.71
TSPAN3-205ENST00000558745 SYNJ2BPP57105 145 aa10.59□□□□□ -0.71
TSPAN3-205ENST00000558745 AP3S2P59780 193 aa10.59□□□□□ -0.71
TSPAN3-205ENST00000558745 SUPT4H1P63272 117 aaKnown RBP10.59□□□□□ -0.71
TSPAN3-205ENST00000558745 C9orf66Q5T8R8 295 aa10.59□□□□□ -0.71
TSPAN3-205ENST00000558745 SLC25A24Q6NUK1 477 aa10.59□□□□□ -0.71
TSPAN3-205ENST00000558745 CLEC19AQ6UXS0 136 aa10.59□□□□□ -0.71
TSPAN3-205ENST00000558745 TMED4Q7Z7H5 227 aa10.59□□□□□ -0.71
TSPAN3-205ENST00000558745 FAM223AQ8IWN6 122 aa10.59□□□□□ -0.71
TSPAN3-205ENST00000558745 GPR146Q96CH1 333 aa10.59□□□□□ -0.71
TSPAN3-205ENST00000558745 TSC22D3Q99576 134 aa10.59□□□□□ -0.71
TSPAN3-205ENST00000558745 FKBP11Q9NYL4 201 aa10.59□□□□□ -0.71
TSPAN3-205ENST00000558745 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.58□□□□□ -0.71
TSPAN3-205ENST00000558745 K7EIL1 84 aa10.58□□□□□ -0.71
TSPAN3-205ENST00000558745 ST8SIA3O43173 380 aa10.58□□□□□ -0.71
TSPAN3-205ENST00000558745 SAP30O75446 220 aa10.58□□□□□ -0.71
TSPAN3-205ENST00000558745 HSPE1P61604 102 aaKnown RBP10.58□□□□□ -0.71
TSPAN3-205ENST00000558745 EGFEM1PQ0D2K5 195 aa10.58□□□□□ -0.71
TSPAN3-205ENST00000558745 KLF5Q13887 457 aaPredicted RBP10.58□□□□□ -0.71
TSPAN3-205ENST00000558745 TMEM187Q14656 261 aa10.58□□□□□ -0.71
TSPAN3-205ENST00000558745 KLK9Q2XQG4 91 aa10.58□□□□□ -0.71
TSPAN3-205ENST00000558745 TMEM268Q5VZI3 342 aa10.58□□□□□ -0.71
TSPAN3-205ENST00000558745 TRIQKQ629K1 86 aa10.58□□□□□ -0.71
TSPAN3-205ENST00000558745 SGPP2Q8IWX5 399 aa10.58□□□□□ -0.71
TSPAN3-205ENST00000558745 OR5B3Q8NH48 314 aa10.58□□□□□ -0.71
TSPAN3-205ENST00000558745 LSM10Q969L4 123 aaKnown RBP10.58□□□□□ -0.71
TSPAN3-205ENST00000558745 CCDC140Q96MF4 163 aa10.58□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms