RNA–Protein interactions for RNA: ENST00000557713.5

SCFD1-224, Transcript of sec1 family domain containing 1, humanhuman

TSL 4

Gene SCFD1, Length 556 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-224ENST00000557713 PLEKHA2Q9HB19 425 aa11.83□□□□□ -0.52
SCFD1-224ENST00000557713 TMEM140Q9NV12 185 aa11.83□□□□□ -0.52
SCFD1-224ENST00000557713 UBQLN2Q9UHD9 624 aa11.83□□□□□ -0.52
SCFD1-224ENST00000557713 RAB26Q9ULW5 256 aa11.83□□□□□ -0.52
SCFD1-224ENST00000557713 SSR3Q9UNL2 185 aa11.83□□□□□ -0.52
SCFD1-224ENST00000557713 NUPR2A6NF83 97 aa11.82□□□□□ -0.52
SCFD1-224ENST00000557713 TRAPPC2P0DI81 140 aa11.82□□□□□ -0.52
SCFD1-224ENST00000557713 TRAPPC2BP0DI82 140 aa11.82□□□□□ -0.52
SCFD1-224ENST00000557713 ATF4P18848 351 aaPredicted RBP11.82□□□□□ -0.52
SCFD1-224ENST00000557713 FXYD4P59646 89 aa11.82□□□□□ -0.52
SCFD1-224ENST00000557713 WT1-ASQ06250 92 aa11.82□□□□□ -0.52
SCFD1-224ENST00000557713 THOC7Q6I9Y2 204 aaKnown RBP11.82□□□□□ -0.52
SCFD1-224ENST00000557713 GDPD1Q8N9F7 314 aa11.82□□□□□ -0.52
SCFD1-224ENST00000557713 CD300LFQ8TDQ1 290 aa11.82□□□□□ -0.52
SCFD1-224ENST00000557713 RNF183Q96D59 192 aa11.82□□□□□ -0.52
SCFD1-224ENST00000557713 AUNIPQ9H7T9 357 aa11.82□□□□□ -0.52
SCFD1-224ENST00000557713 ETV7Q9Y603 341 aa11.82□□□□□ -0.52
SCFD1-224ENST00000557713 FRAS1Q86XX4 4008 aa11.82□□□□□ -0.52
SCFD1-224ENST00000557713 A0A0A6YYH2 397 aa11.81□□□□□ -0.52
SCFD1-224ENST00000557713 KIR2DL5BA0A0G2JN68 375 aa11.81□□□□□ -0.52
SCFD1-224ENST00000557713 KIR2DL5BA0A0G2JPC4 375 aa11.81□□□□□ -0.52
SCFD1-224ENST00000557713 OR2T8A6NH00 312 aa11.81□□□□□ -0.52
SCFD1-224ENST00000557713 A6NJ64 397 aa11.81□□□□□ -0.52
SCFD1-224ENST00000557713 CYB5BO43169 146 aa11.81□□□□□ -0.52
SCFD1-224ENST00000557713 S1PR2O95136 353 aa11.81□□□□□ -0.52
SCFD1-224ENST00000557713 OR13C7P0DN81 318 aa11.81□□□□□ -0.52
SCFD1-224ENST00000557713 RPA2P15927 270 aa11.81□□□□□ -0.52
SCFD1-224ENST00000557713 GNRHRP30968 328 aa11.81□□□□□ -0.52
SCFD1-224ENST00000557713 MFAP2P55001 183 aa11.81□□□□□ -0.52
SCFD1-224ENST00000557713 MXD1Q05195 221 aa11.81□□□□□ -0.52
SCFD1-224ENST00000557713 DEFB135Q30KP9 77 aa11.81□□□□□ -0.52
SCFD1-224ENST00000557713 ODF3L2Q3SX64 289 aa11.81□□□□□ -0.52
SCFD1-224ENST00000557713 SLC25A24Q6NUK1 477 aa11.81□□□□□ -0.52
SCFD1-224ENST00000557713 KIR2DL5AQ8N109 375 aa11.81□□□□□ -0.52
SCFD1-224ENST00000557713 DMBX1Q8NFW5 382 aa11.81□□□□□ -0.52
SCFD1-224ENST00000557713 OR5AP2Q8NGF4 316 aa11.81□□□□□ -0.52
SCFD1-224ENST00000557713 OR51H1Q8NH63 302 aa11.81□□□□□ -0.52
SCFD1-224ENST00000557713 KIR2DL5BQ8NHK3 375 aa11.81□□□□□ -0.52
SCFD1-224ENST00000557713 FCGR1BQ92637 280 aa11.81□□□□□ -0.52
SCFD1-224ENST00000557713 BSCL2Q96G97 398 aaPredicted RBP11.81□□□□□ -0.52
SCFD1-224ENST00000557713 ATP6V0BQ99437 205 aa11.81□□□□□ -0.52
SCFD1-224ENST00000557713 CHRDL1Q9BU40 450 aa11.81□□□□□ -0.52
SCFD1-224ENST00000557713 DAZ1Q9NQZ3 744 aaKnown RBP11.81□□□□□ -0.52
SCFD1-224ENST00000557713 COMMD9Q9P000 198 aa11.81□□□□□ -0.52
SCFD1-224ENST00000557713 F8W735 103 aaPredicted RBP11.8□□□□□ -0.52
SCFD1-224ENST00000557713 K7EMT4 169 aa11.8□□□□□ -0.52
SCFD1-224ENST00000557713 NDUFA4O00483 81 aa11.8□□□□□ -0.52
SCFD1-224ENST00000557713 FCER2P06734 321 aa11.8□□□□□ -0.52
SCFD1-224ENST00000557713 IDNKQ5T6J7 187 aa11.8□□□□□ -0.52
SCFD1-224ENST00000557713 LAMTOR1Q6IAA8 161 aa11.8□□□□□ -0.52
SCFD1-224ENST00000557713 SPSB3Q6PJ21 355 aa11.8□□□□□ -0.52
SCFD1-224ENST00000557713 HSD17B13Q7Z5P4 300 aaPredicted RBP11.8□□□□□ -0.52
SCFD1-224ENST00000557713 STPG3Q8N7X2 389 aa11.8□□□□□ -0.52
SCFD1-224ENST00000557713 RNF167Q9H6Y7 350 aa11.8□□□□□ -0.52
SCFD1-224ENST00000557713 NDUFA4L2Q9NRX3 87 aa11.8□□□□□ -0.52
SCFD1-224ENST00000557713 KMT2AQ03164 3969 aa11.79□□□□□ -0.52
SCFD1-224ENST00000557713 ADMP35318 185 aa11.79□□□□□ -0.52
SCFD1-224ENST00000557713 CBX5P45973 191 aa11.79□□□□□ -0.52
SCFD1-224ENST00000557713 AADACL3Q5VUY0 350 aa11.79□□□□□ -0.52
SCFD1-224ENST00000557713 DHRS11Q6UWP2 260 aa11.79□□□□□ -0.52
SCFD1-224ENST00000557713 TMEM17Q86X19 198 aa11.79□□□□□ -0.52
SCFD1-224ENST00000557713 CADM3Q8N126 398 aa11.79□□□□□ -0.52
SCFD1-224ENST00000557713 OR1L8Q8NGR8 309 aa11.79□□□□□ -0.52
SCFD1-224ENST00000557713 SCARB1Q8WTV0 552 aa11.79□□□□□ -0.52
SCFD1-224ENST00000557713 DIABLOQ9NR28 239 aa11.79□□□□□ -0.52
SCFD1-224ENST00000557713 F11RQ9Y624 299 aaKnown RBP11.79□□□□□ -0.52
SCFD1-224ENST00000557713 IGHV3-21A0A0B4J1V1 117 aa11.78□□□□□ -0.52
SCFD1-224ENST00000557713 OR4C46A6NHA9 309 aa11.78□□□□□ -0.52
SCFD1-224ENST00000557713 MARCH11A6NNE9 402 aa11.78□□□□□ -0.52
SCFD1-224ENST00000557713 F2RP25116 425 aa11.78□□□□□ -0.52
SCFD1-224ENST00000557713 BORCS5Q969J3 196 aa11.78□□□□□ -0.52
SCFD1-224ENST00000557713 GALNT14Q96FL9 552 aa11.78□□□□□ -0.52
SCFD1-224ENST00000557713 ZNF414Q96IQ9 312 aa11.78□□□□□ -0.52
SCFD1-224ENST00000557713 MAP6D1Q9H9H5 199 aa11.78□□□□□ -0.52
SCFD1-224ENST00000557713 C21orf62Q9NYP8 219 aa11.78□□□□□ -0.52
SCFD1-224ENST00000557713 KLK5Q9Y337 293 aaPredicted RBP11.78□□□□□ -0.52
SCFD1-224ENST00000557713 IGHV3OR16-8A0A075B7F1 116 aa11.77□□□□□ -0.53
SCFD1-224ENST00000557713 MEIS3P1A6NDR6 274 aa11.77□□□□□ -0.53
SCFD1-224ENST00000557713 K7EIM0 57 aa11.77□□□□□ -0.53
SCFD1-224ENST00000557713 PGLYRP1O75594 196 aaPredicted RBP11.77□□□□□ -0.53
SCFD1-224ENST00000557713 CTSDP07339 412 aaPredicted RBP11.77□□□□□ -0.53
SCFD1-224ENST00000557713 CTSGP08311 255 aa11.77□□□□□ -0.53
SCFD1-224ENST00000557713 RPL35AP18077 110 aaKnown RBP11.77□□□□□ -0.53
SCFD1-224ENST00000557713 LPAR6P43657 344 aa11.77□□□□□ -0.53
SCFD1-224ENST00000557713 LSM10Q969L4 123 aaKnown RBP11.77□□□□□ -0.53
SCFD1-224ENST00000557713 C20orf24Q9BUV8 137 aa11.77□□□□□ -0.53
SCFD1-224ENST00000557713 YTHDF1Q9BYJ9 559 aaKnown RBP11.77□□□□□ -0.53
SCFD1-224ENST00000557713 SMPXQ9UHP9 88 aa11.77□□□□□ -0.53
SCFD1-224ENST00000557713 DNAH10Q8IVF4 4471 aa11.77□□□□□ -0.53
SCFD1-224ENST00000557713 C15orf62A8K5M9 175 aa11.76□□□□□ -0.53
SCFD1-224ENST00000557713 ZNF207O43670 478 aaKnown RBP11.76□□□□□ -0.53
SCFD1-224ENST00000557713 HERV-K104P61576 105 aa11.76□□□□□ -0.53
SCFD1-224ENST00000557713 ERVK-16P61578 105 aa11.76□□□□□ -0.53
SCFD1-224ENST00000557713 TMEM217Q8N7C4 229 aa11.76□□□□□ -0.53
SCFD1-224ENST00000557713 OR5B3Q8NH48 314 aa11.76□□□□□ -0.53
SCFD1-224ENST00000557713 FCAMRQ8WWV6 532 aa11.76□□□□□ -0.53
SCFD1-224ENST00000557713 MOB3AQ96BX8 217 aa11.76□□□□□ -0.53
SCFD1-224ENST00000557713 HINT2Q9BX68 163 aa11.76□□□□□ -0.53
SCFD1-224ENST00000557713 NSG2Q9Y328 171 aa11.76□□□□□ -0.53
SCFD1-224ENST00000557713 OR51B2Q9Y5P1 312 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms