RNA–Protein interactions for RNA: ENST00000557358.1

VPS33B-206, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 4

Gene VPS33B, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-206ENST00000557358 RSRP1Q9BUV0 290 aa10.68□□□□□ -0.7
VPS33B-206ENST00000557358 SLC2A8Q9NY64 477 aa10.68□□□□□ -0.7
VPS33B-206ENST00000557358 THYN1Q9P016 225 aa10.68□□□□□ -0.7
VPS33B-206ENST00000557358 COPZ2Q9P299 210 aa10.68□□□□□ -0.7
VPS33B-206ENST00000557358 PEF1Q9UBV8 284 aaKnown RBP10.68□□□□□ -0.7
VPS33B-206ENST00000557358 SCP2D1Q9UJQ7 156 aa10.68□□□□□ -0.7
VPS33B-206ENST00000557358 HMX3A6NHT5 357 aa10.67□□□□□ -0.7
VPS33B-206ENST00000557358 UPK2O00526 184 aa10.67□□□□□ -0.7
VPS33B-206ENST00000557358 LY86O95711 162 aa10.67□□□□□ -0.7
VPS33B-206ENST00000557358 KRASP01116 189 aa10.67□□□□□ -0.7
VPS33B-206ENST00000557358 RPA2P15927 270 aa10.67□□□□□ -0.7
VPS33B-206ENST00000557358 BTCP35070 178 aa10.67□□□□□ -0.7
VPS33B-206ENST00000557358 BRWD1-AS2P59051 145 aa10.67□□□□□ -0.7
VPS33B-206ENST00000557358 MRGPRG-AS1Q2M3A8 158 aa10.67□□□□□ -0.7
VPS33B-206ENST00000557358 TBC1D26Q86UD7 250 aa10.67□□□□□ -0.7
VPS33B-206ENST00000557358 OR51S1Q8NGJ8 323 aa10.67□□□□□ -0.7
VPS33B-206ENST00000557358 OR1L8Q8NGR8 309 aa10.67□□□□□ -0.7
VPS33B-206ENST00000557358 ENKURQ8TC29 256 aa10.67□□□□□ -0.7
VPS33B-206ENST00000557358 DLX4Q92988 240 aaPredicted RBP10.67□□□□□ -0.7
VPS33B-206ENST00000557358 QTRT1Q9BXR0 403 aaKnown RBP10.67□□□□□ -0.7
VPS33B-206ENST00000557358 PRNDQ9UKY0 176 aa10.67□□□□□ -0.7
VPS33B-206ENST00000557358 SORL1Q92673 2214 aa10.67□□□□□ -0.7
VPS33B-206ENST00000557358 RBMXL2O75526 392 aaKnown RBP10.66□□□□□ -0.7
VPS33B-206ENST00000557358 PTTG1O95997 202 aa10.66□□□□□ -0.7
VPS33B-206ENST00000557358 PSMB6P28072 239 aa10.66□□□□□ -0.7
VPS33B-206ENST00000557358 EXOSC2Q13868 293 aaKnown RBP10.66□□□□□ -0.7
VPS33B-206ENST00000557358 RGS21Q2M5E4 152 aa10.66□□□□□ -0.7
VPS33B-206ENST00000557358 ZNF343Q6P1L6 599 aa10.66□□□□□ -0.7
VPS33B-206ENST00000557358 H2BFWTQ7Z2G1 175 aa10.66□□□□□ -0.7
VPS33B-206ENST00000557358 LHFPL1Q86WI0 220 aa10.66□□□□□ -0.7
VPS33B-206ENST00000557358 CADM3Q8N126 398 aa10.66□□□□□ -0.7
VPS33B-206ENST00000557358 OR4A16Q8NH70 328 aa10.66□□□□□ -0.7
VPS33B-206ENST00000557358 TERB2Q8NHR7 220 aa10.66□□□□□ -0.7
VPS33B-206ENST00000557358 TMEM56Q96MV1 263 aa10.66□□□□□ -0.7
VPS33B-206ENST00000557358 C14orf166Q9Y224 244 aaKnown RBP10.66□□□□□ -0.7
VPS33B-206ENST00000557358 FAM240BA0A1B0GVZ2 78 aa10.65□□□□□ -0.7
VPS33B-206ENST00000557358 TEX22C9J3V5 150 aa10.65□□□□□ -0.7
VPS33B-206ENST00000557358 B3GALNT1O75752 331 aa10.65□□□□□ -0.7
VPS33B-206ENST00000557358 OR2J3O76001 311 aa10.65□□□□□ -0.7
VPS33B-206ENST00000557358 IL6RP08887 468 aaPredicted RBP10.65□□□□□ -0.7
VPS33B-206ENST00000557358 TRAPPC2P0DI81 140 aa10.65□□□□□ -0.7
VPS33B-206ENST00000557358 TRAPPC2BP0DI82 140 aa10.65□□□□□ -0.7
VPS33B-206ENST00000557358 G6PCP35575 357 aa10.65□□□□□ -0.7
VPS33B-206ENST00000557358 MECP2P51608 486 aaKnown RBP10.65□□□□□ -0.7
VPS33B-206ENST00000557358 CCR6P51684 374 aa10.65□□□□□ -0.7
VPS33B-206ENST00000557358 PIGPP57054 158 aa10.65□□□□□ -0.7
VPS33B-206ENST00000557358 KRTAP10-11P60412 298 aa10.65□□□□□ -0.7
VPS33B-206ENST00000557358 RND3P61587 244 aa10.65□□□□□ -0.7
VPS33B-206ENST00000557358 RBMS2Q15434 407 aaKnown RBP10.65□□□□□ -0.7
VPS33B-206ENST00000557358 C15orf32Q32M92 178 aa10.65□□□□□ -0.7
VPS33B-206ENST00000557358 EEF1AKMT3Q96AZ1 226 aa10.65□□□□□ -0.7
VPS33B-206ENST00000557358 CXorf58Q96LI9 332 aa10.65□□□□□ -0.7
VPS33B-206ENST00000557358 SCGB3A2Q96PL1 93 aa10.65□□□□□ -0.7
VPS33B-206ENST00000557358 HINT2Q9BX68 163 aa10.65□□□□□ -0.7
VPS33B-206ENST00000557358 PEMTQ9UBM1 199 aa10.65□□□□□ -0.7
VPS33B-206ENST00000557358 FBXL7Q9UJT9 491 aa10.65□□□□□ -0.7
VPS33B-206ENST00000557358 TRBV9A0A0B4J1U6 114 aa10.64□□□□□ -0.71
VPS33B-206ENST00000557358 PRH1P02810 166 aa10.64□□□□□ -0.71
VPS33B-206ENST00000557358 CRYGCP07315 174 aa10.64□□□□□ -0.71
VPS33B-206ENST00000557358 OR2B8PP59922 312 aa10.64□□□□□ -0.71
VPS33B-206ENST00000557358 ACSM6Q6P461 480 aa10.64□□□□□ -0.71
VPS33B-206ENST00000557358 NRARPQ7Z6K4 114 aa10.64□□□□□ -0.71
VPS33B-206ENST00000557358 OR13C8Q8NGS7 320 aa10.64□□□□□ -0.71
VPS33B-206ENST00000557358 OR5B3Q8NH48 314 aa10.64□□□□□ -0.71
VPS33B-206ENST00000557358 RNASE11Q8TAA1 199 aaKnown RBP10.64□□□□□ -0.71
VPS33B-206ENST00000557358 SLC25A21Q9BQT8 299 aaPredicted RBP10.64□□□□□ -0.71
VPS33B-206ENST00000557358 ZNF256Q9Y2P7 627 aaPredicted RBP10.64□□□□□ -0.71
VPS33B-206ENST00000557358 OR51B2Q9Y5P1 312 aa10.64□□□□□ -0.71
VPS33B-206ENST00000557358 H0Y980 276 aa10.63□□□□□ -0.71
VPS33B-206ENST00000557358 NDUFB6O95139 128 aa10.63□□□□□ -0.71
VPS33B-206ENST00000557358 AREGP15514 252 aa10.63□□□□□ -0.71
VPS33B-206ENST00000557358 CTRB1P17538 263 aa10.63□□□□□ -0.71
VPS33B-206ENST00000557358 AKR1C2P52895 323 aa10.63□□□□□ -0.71
VPS33B-206ENST00000557358 SURF2Q15527 256 aaPredicted RBP10.63□□□□□ -0.71
VPS33B-206ENST00000557358 TRIM16LQ309B1 348 aa10.63□□□□□ -0.71
VPS33B-206ENST00000557358 CTRB2Q6GPI1 263 aa10.63□□□□□ -0.71
VPS33B-206ENST00000557358 OR1L6Q8NGR2 347 aa10.63□□□□□ -0.71
VPS33B-206ENST00000557358 MARCH1Q8TCQ1 289 aa10.63□□□□□ -0.71
VPS33B-206ENST00000557358 LSM10Q969L4 123 aaKnown RBP10.63□□□□□ -0.71
VPS33B-206ENST00000557358 MRGPRFQ96AM1 343 aa10.63□□□□□ -0.71
VPS33B-206ENST00000557358 PDCD10Q9BUL8 212 aa10.63□□□□□ -0.71
VPS33B-206ENST00000557358 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.62□□□□□ -0.71
VPS33B-206ENST00000557358 TRBV7-1A0A0A6YYK4 115 aa10.62□□□□□ -0.71
VPS33B-206ENST00000557358 TEX13DA0A0J9YY54 714 aaPredicted RBP10.62□□□□□ -0.71
VPS33B-206ENST00000557358 C3orf85A0A1B0GTC6 90 aa10.62□□□□□ -0.71
VPS33B-206ENST00000557358 WI2-2373I1.2A0A1W2PRP0 233 aa10.62□□□□□ -0.71
VPS33B-206ENST00000557358 K7EIL1 84 aa10.62□□□□□ -0.71
VPS33B-206ENST00000557358 GGCTO75223 188 aaKnown RBP10.62□□□□□ -0.71
VPS33B-206ENST00000557358 TCRBP04435 133 aa10.62□□□□□ -0.71
VPS33B-206ENST00000557358 REG1AP05451 166 aa10.62□□□□□ -0.71
VPS33B-206ENST00000557358 CTSDP07339 412 aaPredicted RBP10.62□□□□□ -0.71
VPS33B-206ENST00000557358 OR13C7P0DN81 318 aa10.62□□□□□ -0.71
VPS33B-206ENST00000557358 PI3P19957 117 aa10.62□□□□□ -0.71
VPS33B-206ENST00000557358 SYNJ2BPP57105 145 aa10.62□□□□□ -0.71
VPS33B-206ENST00000557358 DEFA5Q01523 94 aa10.62□□□□□ -0.71
VPS33B-206ENST00000557358 KLF5Q13887 457 aaPredicted RBP10.62□□□□□ -0.71
VPS33B-206ENST00000557358 ZNF585BQ52M93 769 aa10.62□□□□□ -0.71
VPS33B-206ENST00000557358 DUSP18Q8NEJ0 188 aa10.62□□□□□ -0.71
VPS33B-206ENST00000557358 OR9G4Q8NGQ1 327 aa10.62□□□□□ -0.71
VPS33B-206ENST00000557358 RRNAD1Q96FB5 475 aaKnown RBP10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms