RNA–Protein interactions for RNA: ENST00000557269.5

SHMT2-227, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 576 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-227ENST00000557269 OR5AU1Q8NGC0 362 aa10.03□□□□□ -0.8
SHMT2-227ENST00000557269 OR1L8Q8NGR8 309 aa10.03□□□□□ -0.8
SHMT2-227ENST00000557269 HINT2Q9BX68 163 aa10.03□□□□□ -0.8
SHMT2-227ENST00000557269 KLK15Q9H2R5 256 aa10.03□□□□□ -0.8
SHMT2-227ENST00000557269 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.03□□□□□ -0.8
SHMT2-227ENST00000557269 TMED3Q9Y3Q3 217 aa10.03□□□□□ -0.8
SHMT2-227ENST00000557269 A0A1B0GU03 582 aa10.02□□□□□ -0.81
SHMT2-227ENST00000557269 A0A1W2PN81 502 aa10.02□□□□□ -0.81
SHMT2-227ENST00000557269 SNRPGP15A8MWD9 76 aa10.02□□□□□ -0.81
SHMT2-227ENST00000557269 PRAF2O60831 178 aa10.02□□□□□ -0.81
SHMT2-227ENST00000557269 PITX3O75364 302 aa10.02□□□□□ -0.81
SHMT2-227ENST00000557269 IGLV1-40P01703 118 aa10.02□□□□□ -0.81
SHMT2-227ENST00000557269 IGHG4P01861 327 aa10.02□□□□□ -0.81
SHMT2-227ENST00000557269 TRAPPC2P0DI81 140 aa10.02□□□□□ -0.81
SHMT2-227ENST00000557269 TRAPPC2BP0DI82 140 aa10.02□□□□□ -0.81
SHMT2-227ENST00000557269 SULT1A3P0DMM9 295 aa10.02□□□□□ -0.81
SHMT2-227ENST00000557269 SULT1A4P0DMN0 295 aa10.02□□□□□ -0.81
SHMT2-227ENST00000557269 CHRNA7P36544 502 aa10.02□□□□□ -0.81
SHMT2-227ENST00000557269 HSPE1P61604 102 aaKnown RBP10.02□□□□□ -0.81
SHMT2-227ENST00000557269 WT1-ASQ06250 92 aa10.02□□□□□ -0.81
SHMT2-227ENST00000557269 SMCO1Q147U7 214 aa10.02□□□□□ -0.81
SHMT2-227ENST00000557269 TATDN3Q17R31 274 aa10.02□□□□□ -0.81
SHMT2-227ENST00000557269 KRTAP21-3Q3LHN1 58 aa10.02□□□□□ -0.81
SHMT2-227ENST00000557269 OR5B3Q8NH48 314 aa10.02□□□□□ -0.81
SHMT2-227ENST00000557269 OR10C1Q96KK4 312 aa10.02□□□□□ -0.81
SHMT2-227ENST00000557269 SPIN2AQ99865 258 aa10.02□□□□□ -0.81
SHMT2-227ENST00000557269 SPIN2BQ9BPZ2 258 aa10.02□□□□□ -0.81
SHMT2-227ENST00000557269 GPN1Q9HCN4 374 aaPredicted RBP10.02□□□□□ -0.81
SHMT2-227ENST00000557269 FKBP11Q9NYL4 201 aa10.02□□□□□ -0.81
SHMT2-227ENST00000557269 ZNF257Q9Y2Q1 563 aa10.02□□□□□ -0.81
SHMT2-227ENST00000557269 ALG5Q9Y673 324 aa10.02□□□□□ -0.81
SHMT2-227ENST00000557269 TENM1Q9UKZ4 2725 aa10.01□□□□□ -0.81
SHMT2-227ENST00000557269 C7orf66A4D0T2 115 aa10.01□□□□□ -0.81
SHMT2-227ENST00000557269 PRH1P02810 166 aa10.01□□□□□ -0.81
SHMT2-227ENST00000557269 PRCDQ00LT1 54 aa10.01□□□□□ -0.81
SHMT2-227ENST00000557269 TMEM267Q0VDI3 215 aaPredicted RBP10.01□□□□□ -0.81
SHMT2-227ENST00000557269 CXorf66Q5JRM2 361 aaPredicted RBP10.01□□□□□ -0.81
SHMT2-227ENST00000557269 C12orf54Q6X4T0 127 aa10.01□□□□□ -0.81
SHMT2-227ENST00000557269 TTC9CQ8N5M4 171 aa10.01□□□□□ -0.81
SHMT2-227ENST00000557269 MS4A10Q96PG2 267 aa10.01□□□□□ -0.81
SHMT2-227ENST00000557269 COA4Q9NYJ1 87 aa10.01□□□□□ -0.81
SHMT2-227ENST00000557269 COL6A5A8TX70 2615 aa10□□□□□ -0.81
SHMT2-227ENST00000557269 IFNA17P01571 189 aa10□□□□□ -0.81
SHMT2-227ENST00000557269 RPLP1P05386 114 aaKnown RBP10□□□□□ -0.81
SHMT2-227ENST00000557269 OR13C7P0DN81 318 aa10□□□□□ -0.81
SHMT2-227ENST00000557269 SLC25A6P12236 298 aa10□□□□□ -0.81
SHMT2-227ENST00000557269 PSMB8P28062 276 aa10□□□□□ -0.81
SHMT2-227ENST00000557269 PSMB6P28072 239 aa10□□□□□ -0.81
SHMT2-227ENST00000557269 SLC35B1P78383 322 aa10□□□□□ -0.81
SHMT2-227ENST00000557269 DEFA5Q01523 94 aa10□□□□□ -0.81
SHMT2-227ENST00000557269 KIAA0141Q14154 515 aaPredicted RBP10□□□□□ -0.81
SHMT2-227ENST00000557269 OR52E5Q8NH55 327 aa10□□□□□ -0.81
SHMT2-227ENST00000557269 OR1S1Q8NH92 325 aa10□□□□□ -0.81
SHMT2-227ENST00000557269 FAM110DQ8TAY7 271 aaPredicted RBP10□□□□□ -0.81
SHMT2-227ENST00000557269 CITED2Q99967 270 aaPredicted RBP10□□□□□ -0.81
SHMT2-227ENST00000557269 ZNF747Q9BV97 191 aa10□□□□□ -0.81
SHMT2-227ENST00000557269 GON7Q9BXV9 100 aa10□□□□□ -0.81
SHMT2-227ENST00000557269 DMRT1Q9Y5R6 373 aa10□□□□□ -0.81
SHMT2-227ENST00000557269 PIGBOS1A0A0B4J2F0 54 aa9.99□□□□□ -0.81
SHMT2-227ENST00000557269 C13orf42A0A1B0GVH6 325 aa9.99□□□□□ -0.81
SHMT2-227ENST00000557269 NPIPB5A8MRT5 1133 aa9.99□□□□□ -0.81
SHMT2-227ENST00000557269 FBXO24O75426 580 aa9.99□□□□□ -0.81
SHMT2-227ENST00000557269 SIX6O95475 246 aa9.99□□□□□ -0.81
SHMT2-227ENST00000557269 IFNA21P01568 189 aa9.99□□□□□ -0.81
SHMT2-227ENST00000557269 CRYGCP07315 174 aa9.99□□□□□ -0.81
SHMT2-227ENST00000557269 PF4V1P10720 104 aa9.99□□□□□ -0.81
SHMT2-227ENST00000557269 CTRB1P17538 263 aa9.99□□□□□ -0.81
SHMT2-227ENST00000557269 MFAP2P55001 183 aa9.99□□□□□ -0.81
SHMT2-227ENST00000557269 SPCS3P61009 180 aa9.99□□□□□ -0.81
SHMT2-227ENST00000557269 CD83Q01151 205 aa9.99□□□□□ -0.81
SHMT2-227ENST00000557269 FOXE3Q13461 319 aa9.99□□□□□ -0.81
SHMT2-227ENST00000557269 PDLIM3Q53GG5 364 aaPredicted RBP9.99□□□□□ -0.81
SHMT2-227ENST00000557269 CTRB2Q6GPI1 263 aa9.99□□□□□ -0.81
SHMT2-227ENST00000557269 TEX38Q6PEX7 206 aa9.99□□□□□ -0.81
SHMT2-227ENST00000557269 C18orf65Q6ZTR6 163 aa9.99□□□□□ -0.81
SHMT2-227ENST00000557269 C3orf56Q8N813 242 aa9.99□□□□□ -0.81
SHMT2-227ENST00000557269 RNF152Q8N8N0 203 aa9.99□□□□□ -0.81
SHMT2-227ENST00000557269 OR4D5Q8NGN0 318 aa9.99□□□□□ -0.81
SHMT2-227ENST00000557269 OR5M8Q8NGP6 311 aa9.99□□□□□ -0.81
SHMT2-227ENST00000557269 WDR89Q96FK6 387 aaPredicted RBP9.99□□□□□ -0.81
SHMT2-227ENST00000557269 TMEM68Q96MH6 324 aa9.99□□□□□ -0.81
SHMT2-227ENST00000557269 CITED1Q99966 193 aa9.99□□□□□ -0.81
SHMT2-227ENST00000557269 SRSF8Q9BRL6 282 aaKnown RBP9.99□□□□□ -0.81
SHMT2-227ENST00000557269 RBKSQ9H477 322 aa9.99□□□□□ -0.81
SHMT2-227ENST00000557269 PLEKHA3Q9HB20 300 aa9.99□□□□□ -0.81
SHMT2-227ENST00000557269 HSPB7Q9UBY9 170 aa9.99□□□□□ -0.81
SHMT2-227ENST00000557269 ADARB2-AS1A8MUL3 147 aa9.98□□□□□ -0.81
SHMT2-227ENST00000557269 FAM25EA8MYX2 175 aa9.98□□□□□ -0.81
SHMT2-227ENST00000557269 GOSR2O14653 212 aa9.98□□□□□ -0.81
SHMT2-227ENST00000557269 ELANEP08246 267 aa9.98□□□□□ -0.81
SHMT2-227ENST00000557269 RAB9AP51151 201 aa9.98□□□□□ -0.81
SHMT2-227ENST00000557269 TNFRSF9Q07011 255 aa9.98□□□□□ -0.81
SHMT2-227ENST00000557269 IAH1Q2TAA2 248 aaPredicted RBP9.98□□□□□ -0.81
SHMT2-227ENST00000557269 THOC7Q6I9Y2 204 aaKnown RBP9.98□□□□□ -0.81
SHMT2-227ENST00000557269 OR2C3Q8N628 320 aa9.98□□□□□ -0.81
SHMT2-227ENST00000557269 OR4X2Q8NGF9 303 aa9.98□□□□□ -0.81
SHMT2-227ENST00000557269 MYOZ3Q8TDC0 251 aa9.98□□□□□ -0.81
SHMT2-227ENST00000557269 FANCD2OSQ96PS1 177 aa9.98□□□□□ -0.81
SHMT2-227ENST00000557269 PDCD10Q9BUL8 212 aa9.98□□□□□ -0.81
SHMT2-227ENST00000557269 MAGT1Q9H0U3 335 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms