RNA–Protein interactions for RNA: ENST00000557076.5

SCFD1-223, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 743 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-223ENST00000557076 PAFAH1B2P68402 229 aa3.3□□□□□ -1.88
SCFD1-223ENST00000557076 RTL8BQ17RB0 113 aa3.3□□□□□ -1.88
SCFD1-223ENST00000557076 IZUMO4Q1ZYL8 232 aa3.3□□□□□ -1.88
SCFD1-223ENST00000557076 VMA21Q3ZAQ7 101 aa3.3□□□□□ -1.88
SCFD1-223ENST00000557076 C12orf73Q69YU5 71 aa3.3□□□□□ -1.88
SCFD1-223ENST00000557076 KRTAP5-1Q6L8H4 278 aa3.3□□□□□ -1.88
SCFD1-223ENST00000557076 ZNF880Q6PDB4 577 aa3.3□□□□□ -1.88
SCFD1-223ENST00000557076 SSX9Q7RTT3 188 aa3.3□□□□□ -1.88
SCFD1-223ENST00000557076 CEACAM19Q7Z692 300 aa3.3□□□□□ -1.88
SCFD1-223ENST00000557076 DHFR2Q86XF0 187 aa3.3□□□□□ -1.88
SCFD1-223ENST00000557076 MMD2Q8IY49 270 aa3.3□□□□□ -1.88
SCFD1-223ENST00000557076 HS3ST5Q8IZT8 346 aa3.3□□□□□ -1.88
SCFD1-223ENST00000557076 OR5AK2Q8NH90 309 aa3.3□□□□□ -1.88
SCFD1-223ENST00000557076 ZNRF2Q8NHG8 242 aa3.3□□□□□ -1.88
SCFD1-223ENST00000557076 ZNF502Q8TBZ5 544 aa3.3□□□□□ -1.88
SCFD1-223ENST00000557076 ACOT12Q8WYK0 555 aa3.3□□□□□ -1.88
SCFD1-223ENST00000557076 TMEM190Q8WZ59 177 aa3.3□□□□□ -1.88
SCFD1-223ENST00000557076 NRBF2Q96F24 287 aa3.3□□□□□ -1.88
SCFD1-223ENST00000557076 MYCBPQ99417 103 aaPredicted RBP3.3□□□□□ -1.88
SCFD1-223ENST00000557076 RNF2Q99496 336 aa3.3□□□□□ -1.88
SCFD1-223ENST00000557076 PDCD1LG2Q9BQ51 273 aa3.3□□□□□ -1.88
SCFD1-223ENST00000557076 RIMS4Q9H426 269 aaPredicted RBP3.3□□□□□ -1.88
SCFD1-223ENST00000557076 ZNF430Q9H8G1 570 aaPredicted RBP3.3□□□□□ -1.88
SCFD1-223ENST00000557076 TMEM14BQ9NUH8 114 aa3.3□□□□□ -1.88
SCFD1-223ENST00000557076 SMPXQ9UHP9 88 aa3.3□□□□□ -1.88
SCFD1-223ENST00000557076 TMED3Q9Y3Q3 217 aa3.3□□□□□ -1.88
SCFD1-223ENST00000557076 LRP2P98164 4655 aa3.29□□□□□ -1.88
SCFD1-223ENST00000557076 A0A087WYN8 130 aa3.29□□□□□ -1.88
SCFD1-223ENST00000557076 TRBV6-6A0A0A6YYG2 114 aa3.29□□□□□ -1.88
SCFD1-223ENST00000557076 DAPL1A0PJW8 107 aa3.29□□□□□ -1.88
SCFD1-223ENST00000557076 TMEM189A5PLL7 270 aa3.29□□□□□ -1.88
SCFD1-223ENST00000557076 CHEK1O14757 476 aa3.29□□□□□ -1.88
SCFD1-223ENST00000557076 NAPSAO96009 420 aa3.29□□□□□ -1.88
SCFD1-223ENST00000557076 SMR3BP02814 79 aaPredicted RBP3.29□□□□□ -1.88
SCFD1-223ENST00000557076 REG1AP05451 166 aa3.29□□□□□ -1.88
SCFD1-223ENST00000557076 CD2P06729 351 aa3.29□□□□□ -1.88
SCFD1-223ENST00000557076 ZNF735P0CB33 412 aa3.29□□□□□ -1.88
SCFD1-223ENST00000557076 RPA2P15927 270 aa3.29□□□□□ -1.88
SCFD1-223ENST00000557076 BDKRB2P30411 391 aa3.29□□□□□ -1.88
SCFD1-223ENST00000557076 RASSF2P50749 326 aa3.29□□□□□ -1.88
SCFD1-223ENST00000557076 DAPP51397 102 aa3.29□□□□□ -1.88
SCFD1-223ENST00000557076 PPP3R1P63098 170 aa3.29□□□□□ -1.88
SCFD1-223ENST00000557076 MS4A2Q01362 244 aa3.29□□□□□ -1.88
SCFD1-223ENST00000557076 MRPL28Q13084 256 aaKnown RBP3.29□□□□□ -1.88
SCFD1-223ENST00000557076 CBX3Q13185 183 aa3.29□□□□□ -1.88
SCFD1-223ENST00000557076 OXA1LQ15070 435 aa3.29□□□□□ -1.88
SCFD1-223ENST00000557076 CDK10Q15131 360 aa3.29□□□□□ -1.88
SCFD1-223ENST00000557076 DDI2Q5TDH0 399 aa3.29□□□□□ -1.88
SCFD1-223ENST00000557076 TMEM268Q5VZI3 342 aa3.29□□□□□ -1.88
SCFD1-223ENST00000557076 SPSB3Q6PJ21 355 aa3.29□□□□□ -1.88
SCFD1-223ENST00000557076 GLIPR1L1Q6UWM5 242 aa3.29□□□□□ -1.88
SCFD1-223ENST00000557076 IDO2Q6ZQW0 420 aa3.29□□□□□ -1.88
SCFD1-223ENST00000557076 STHQ8IWL8 128 aa3.29□□□□□ -1.88
SCFD1-223ENST00000557076 CDH26Q8IXH8 852 aa3.29□□□□□ -1.88
SCFD1-223ENST00000557076 SYS1Q8N2H4 156 aa3.29□□□□□ -1.88
SCFD1-223ENST00000557076 ACBD7Q8N6N7 88 aa3.29□□□□□ -1.88
SCFD1-223ENST00000557076 PRR26Q8N8Z3 221 aa3.29□□□□□ -1.88
SCFD1-223ENST00000557076 C15orf53Q8NAA6 179 aa3.29□□□□□ -1.88
SCFD1-223ENST00000557076 DUSP18Q8NEJ0 188 aa3.29□□□□□ -1.88
SCFD1-223ENST00000557076 OR8J1Q8NGP2 316 aa3.29□□□□□ -1.88
SCFD1-223ENST00000557076 GPR148Q8TDV2 347 aa3.29□□□□□ -1.88
SCFD1-223ENST00000557076 MRPL48Q96GC5 212 aaKnown RBP3.29□□□□□ -1.88
SCFD1-223ENST00000557076 CMTM3Q96MX0 182 aa3.29□□□□□ -1.88
SCFD1-223ENST00000557076 OR2A7Q96R45 310 aa3.29□□□□□ -1.88
SCFD1-223ENST00000557076 ATP6V0BQ99437 205 aa3.29□□□□□ -1.88
SCFD1-223ENST00000557076 SELENOIQ9C0D9 397 aa3.29□□□□□ -1.88
SCFD1-223ENST00000557076 TAS2R4Q9NYW5 299 aa3.29□□□□□ -1.88
SCFD1-223ENST00000557076 MGAT4AQ9UM21 535 aa3.29□□□□□ -1.88
SCFD1-223ENST00000557076 S4R3C0 116 aa3.29□□□□□ -1.88
SCFD1-223ENST00000557076 LRP1Q07954 4544 aaKnown RBP3.29□□□□□ -1.88
SCFD1-223ENST00000557076 IGLV11-55A0A075B6I3 123 aa3.28□□□□□ -1.88
SCFD1-223ENST00000557076 TRBV5-7A0A0A0MS05 114 aa3.28□□□□□ -1.88
SCFD1-223ENST00000557076 TRAV2A0A0B4J234 112 aa3.28□□□□□ -1.88
SCFD1-223ENST00000557076 A0A1B0GUV1 79 aa3.28□□□□□ -1.88
SCFD1-223ENST00000557076 SMIM9A6NGZ8 99 aa3.28□□□□□ -1.88
SCFD1-223ENST00000557076 E7EUB6 86 aa3.28□□□□□ -1.88
SCFD1-223ENST00000557076 PTGES3LE9PB15 166 aa3.28□□□□□ -1.88
SCFD1-223ENST00000557076 M0R129 80 aa3.28□□□□□ -1.88
SCFD1-223ENST00000557076 DEFA4P12838 97 aa3.28□□□□□ -1.88
SCFD1-223ENST00000557076 MGMTP16455 207 aa3.28□□□□□ -1.88
SCFD1-223ENST00000557076 IGFBP3P17936 291 aaPredicted RBP3.28□□□□□ -1.88
SCFD1-223ENST00000557076 GPR183P32249 361 aa3.28□□□□□ -1.88
SCFD1-223ENST00000557076 MAS1LP35410 378 aa3.28□□□□□ -1.88
SCFD1-223ENST00000557076 TFPI2P48307 235 aa3.28□□□□□ -1.88
SCFD1-223ENST00000557076 DEFB131AP59861 70 aa3.28□□□□□ -1.88
SCFD1-223ENST00000557076 RPS27AP62979 156 aaKnown RBP3.28□□□□□ -1.88
SCFD1-223ENST00000557076 LEMD1Q68G75 181 aa3.28□□□□□ -1.88
SCFD1-223ENST00000557076 MOB1BQ7L9L4 216 aa3.28□□□□□ -1.88
SCFD1-223ENST00000557076 TRPT1Q86TN4 253 aaKnown RBP3.28□□□□□ -1.88
SCFD1-223ENST00000557076 DEFB107AQ8IZN7 70 aa3.28□□□□□ -1.88
SCFD1-223ENST00000557076 ARHGAP24Q8N264 748 aa3.28□□□□□ -1.88
SCFD1-223ENST00000557076 TMEM116Q8NCL8 245 aa3.28□□□□□ -1.88
SCFD1-223ENST00000557076 VN1R17PQ8TDU5 208 aa3.28□□□□□ -1.88
SCFD1-223ENST00000557076 DEFB104AQ8WTQ1 72 aa3.28□□□□□ -1.88
SCFD1-223ENST00000557076 TRUB1Q8WWH5 349 aaKnown RBP3.28□□□□□ -1.88
SCFD1-223ENST00000557076 BSCL2Q96G97 398 aaPredicted RBP3.28□□□□□ -1.88
SCFD1-223ENST00000557076 ADTRPQ96IZ2 230 aa3.28□□□□□ -1.88
SCFD1-223ENST00000557076 C4orf36Q96KX1 117 aa3.28□□□□□ -1.88
SCFD1-223ENST00000557076 NEDD4LQ96PU5 975 aa3.28□□□□□ -1.88
SCFD1-223ENST00000557076 ZNF184Q99676 751 aaPredicted RBP3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms