RNA–Protein interactions for RNA: ENST00000556445.1

SRP54-211, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 530 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-211ENST00000556445 CABLES2Q9BTV7 478 aa4.11□□□□□ -1.75
SRP54-211ENST00000556445 C1QTNF6Q9BXI9 259 aa4.11□□□□□ -1.75
SRP54-211ENST00000556445 FGF23Q9GZV9 251 aaPredicted RBP4.11□□□□□ -1.75
SRP54-211ENST00000556445 ARL6Q9H0F7 186 aa4.11□□□□□ -1.75
SRP54-211ENST00000556445 WDR13Q9H1Z4 485 aa4.11□□□□□ -1.75
SRP54-211ENST00000556445 NAA60Q9H7X0 242 aa4.11□□□□□ -1.75
SRP54-211ENST00000556445 HES4Q9HCC6 221 aa4.11□□□□□ -1.75
SRP54-211ENST00000556445 PLSCR3Q9NRY6 295 aa4.11□□□□□ -1.75
SRP54-211ENST00000556445 TAAR3PQ9P1P4 343 aa4.11□□□□□ -1.75
SRP54-211ENST00000556445 TRAPPC2LQ9UL33 140 aa4.11□□□□□ -1.75
SRP54-211ENST00000556445 U3KQ87 197 aa4.11□□□□□ -1.75
SRP54-211ENST00000556445 SVILO95425 2214 aa4.11□□□□□ -1.75
SRP54-211ENST00000556445 CEP250Q9BV73 2442 aa4.11□□□□□ -1.75
SRP54-211ENST00000556445 ESPL1Q14674 2120 aa4.1□□□□□ -1.75
SRP54-211ENST00000556445 WDR87Q6ZQQ6 2873 aa4.1□□□□□ -1.75
SRP54-211ENST00000556445 ACACAQ13085 2346 aa4.1□□□□□ -1.75
SRP54-211ENST00000556445 EYSQ5T1H1 3165 aa4.1□□□□□ -1.75
SRP54-211ENST00000556445 IGLV3-9A0A075B6K5 115 aa4.1□□□□□ -1.75
SRP54-211ENST00000556445 IGKV1D-8A0A087WSZ0 117 aa4.1□□□□□ -1.75
SRP54-211ENST00000556445 TRBV6-7A0A0A0MS04 114 aa4.1□□□□□ -1.75
SRP54-211ENST00000556445 TMEM30CPA0ZSE6 113 aa4.1□□□□□ -1.75
SRP54-211ENST00000556445 PSMB11A5LHX3 300 aa4.1□□□□□ -1.75
SRP54-211ENST00000556445 RNF212BA8MTL3 300 aa4.1□□□□□ -1.75
SRP54-211ENST00000556445 G3V3Q6 166 aa4.1□□□□□ -1.75
SRP54-211ENST00000556445 K7EM74 188 aa4.1□□□□□ -1.75
SRP54-211ENST00000556445 CDIPTO14735 213 aa4.1□□□□□ -1.75
SRP54-211ENST00000556445 TAAR5O14804 337 aa4.1□□□□□ -1.75
SRP54-211ENST00000556445 ARPC5O15511 151 aa4.1□□□□□ -1.75
SRP54-211ENST00000556445 ATG12O94817 140 aa4.1□□□□□ -1.75
SRP54-211ENST00000556445 MPC2O95563 127 aa4.1□□□□□ -1.75
SRP54-211ENST00000556445 OR2H2O95918 312 aa4.1□□□□□ -1.75
SRP54-211ENST00000556445 HAND1O96004 215 aa4.1□□□□□ -1.75
SRP54-211ENST00000556445 OXTP01178 125 aa4.1□□□□□ -1.75
SRP54-211ENST00000556445 WNT2P09544 360 aa4.1□□□□□ -1.75
SRP54-211ENST00000556445 ZP3P21754 424 aa4.1□□□□□ -1.75
SRP54-211ENST00000556445 ZNF83P51522 516 aa4.1□□□□□ -1.75
SRP54-211ENST00000556445 FXYD4P59646 89 aa4.1□□□□□ -1.75
SRP54-211ENST00000556445 SNRPD2P62316 118 aaKnown RBP4.1□□□□□ -1.75
SRP54-211ENST00000556445 SUPT4H1P63272 117 aaKnown RBP4.1□□□□□ -1.75
SRP54-211ENST00000556445 TMEM187Q14656 261 aa4.1□□□□□ -1.75
SRP54-211ENST00000556445 SLC9A3R2Q15599 337 aa4.1□□□□□ -1.75
SRP54-211ENST00000556445 MSMO1Q15800 293 aa4.1□□□□□ -1.75
SRP54-211ENST00000556445 SLC35E4Q6ICL7 350 aa4.1□□□□□ -1.75
SRP54-211ENST00000556445 PRSS54Q6PEW0 395 aa4.1□□□□□ -1.75
SRP54-211ENST00000556445 SPSB3Q6PJ21 355 aa4.1□□□□□ -1.75
SRP54-211ENST00000556445 ACP7Q6ZNF0 438 aa4.1□□□□□ -1.75
SRP54-211ENST00000556445 ZNF497Q6ZNH5 498 aa4.1□□□□□ -1.75
SRP54-211ENST00000556445 MYPOPQ86VE0 399 aaPredicted RBP4.1□□□□□ -1.75
SRP54-211ENST00000556445 GAPTQ8N292 157 aa4.1□□□□□ -1.75
SRP54-211ENST00000556445 ABHD12Q8N2K0 398 aa4.1□□□□□ -1.75
SRP54-211ENST00000556445 KCNRGQ8N5I3 272 aa4.1□□□□□ -1.75
SRP54-211ENST00000556445 TCTEX1D1Q8N7M0 179 aa4.1□□□□□ -1.75
SRP54-211ENST00000556445 OR11L1Q8NGX0 322 aa4.1□□□□□ -1.75
SRP54-211ENST00000556445 MRPL30Q8TCC3 161 aaKnown RBP4.1□□□□□ -1.75
SRP54-211ENST00000556445 RNASEH2CQ8TDP1 164 aaKnown RBP4.1□□□□□ -1.75
SRP54-211ENST00000556445 DTD1Q8TEA8 209 aa4.1□□□□□ -1.75
SRP54-211ENST00000556445 RDH5Q92781 318 aa4.1□□□□□ -1.75
SRP54-211ENST00000556445 PHYHIPLQ96FC7 376 aa4.1□□□□□ -1.75
SRP54-211ENST00000556445 ABHD14BQ96IU4 210 aa4.1□□□□□ -1.75
SRP54-211ENST00000556445 C1QTNF4Q9BXJ3 329 aa4.1□□□□□ -1.75
SRP54-211ENST00000556445 SLC2A9Q9NRM0 540 aa4.1□□□□□ -1.75
SRP54-211ENST00000556445 TNFSF18Q9UNG2 199 aa4.1□□□□□ -1.75
SRP54-211ENST00000556445 ZGRF1Q86YA3 2104 aa4.09□□□□□ -1.75
SRP54-211ENST00000556445 C3orf85A0A1B0GTC6 90 aa4.09□□□□□ -1.75
SRP54-211ENST00000556445 SRRM5B3KS81 715 aa4.09□□□□□ -1.75
SRP54-211ENST00000556445 BET1O15155 118 aa4.09□□□□□ -1.75
SRP54-211ENST00000556445 BCL2L11O43521 198 aa4.09□□□□□ -1.75
SRP54-211ENST00000556445 CDS2O95674 445 aa4.09□□□□□ -1.75
SRP54-211ENST00000556445 CXCL2P19875 107 aa4.09□□□□□ -1.75
SRP54-211ENST00000556445 PVALBP20472 110 aaPredicted RBP4.09□□□□□ -1.75
SRP54-211ENST00000556445 GZMHP20718 246 aa4.09□□□□□ -1.75
SRP54-211ENST00000556445 MT3P25713 68 aa4.09□□□□□ -1.75
SRP54-211ENST00000556445 OR2B8PP59922 312 aa4.09□□□□□ -1.75
SRP54-211ENST00000556445 SLC35B1P78383 322 aa4.09□□□□□ -1.75
SRP54-211ENST00000556445 S100A12P80511 92 aa4.09□□□□□ -1.75
SRP54-211ENST00000556445 RPL24P83731 157 aaKnown RBP4.09□□□□□ -1.75
SRP54-211ENST00000556445 BAMBIQ13145 260 aa4.09□□□□□ -1.75
SRP54-211ENST00000556445 HMGN3Q15651 99 aa4.09□□□□□ -1.75
SRP54-211ENST00000556445 IAH1Q2TAA2 248 aaPredicted RBP4.09□□□□□ -1.75
SRP54-211ENST00000556445 TMEM30BQ3MIR4 351 aa4.09□□□□□ -1.75
SRP54-211ENST00000556445 Q5BKY6 102 aa4.09□□□□□ -1.75
SRP54-211ENST00000556445 ACTL10Q5JWF8 245 aa4.09□□□□□ -1.75
SRP54-211ENST00000556445 CLLU1Q5K131 121 aa4.09□□□□□ -1.75
SRP54-211ENST00000556445 OR8G2PQ6IF36 304 aa4.09□□□□□ -1.75
SRP54-211ENST00000556445 EIF5AL1Q6IS14 154 aaKnown RBP4.09□□□□□ -1.75
SRP54-211ENST00000556445 WDR82Q6UXN9 313 aa4.09□□□□□ -1.75
SRP54-211ENST00000556445 ADAMTSL5Q6ZMM2 481 aa4.09□□□□□ -1.75
SRP54-211ENST00000556445 H1FOOQ8IZA3 346 aaPredicted RBP4.09□□□□□ -1.75
SRP54-211ENST00000556445 ST6GALNAC3Q8NDV1 305 aa4.09□□□□□ -1.75
SRP54-211ENST00000556445 OR2Z1Q8NG97 314 aa4.09□□□□□ -1.75
SRP54-211ENST00000556445 SECTM1Q8WVN6 248 aa4.09□□□□□ -1.75
SRP54-211ENST00000556445 GALMQ96C23 342 aa4.09□□□□□ -1.75
SRP54-211ENST00000556445 SEC22AQ96IW7 307 aa4.09□□□□□ -1.75
SRP54-211ENST00000556445 TMEM222Q9H0R3 208 aa4.09□□□□□ -1.75
SRP54-211ENST00000556445 HEXA-AS1Q9H8Q6 139 aa4.09□□□□□ -1.75
SRP54-211ENST00000556445 ASF1BQ9NVP2 202 aa4.09□□□□□ -1.75
SRP54-211ENST00000556445 RBM7Q9Y580 266 aaKnown RBP4.09□□□□□ -1.75
SRP54-211ENST00000556445 ZFHX2Q9C0A1 2572 aaPredicted RBP4.08□□□□□ -1.76
SRP54-211ENST00000556445 A0A087WYN8 130 aa4.08□□□□□ -1.76
SRP54-211ENST00000556445 TRAV14DV4A0A0A6YYC5 116 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms