RNA–Protein interactions for RNA: ENST00000556203.1

ACTN1-217, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 564 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-217ENST00000556203 SEC22AQ96IW7 307 aa11.68□□□□□ -0.54
ACTN1-217ENST00000556203 TSC22D3Q99576 134 aa11.68□□□□□ -0.54
ACTN1-217ENST00000556203 SRSF8Q9BRL6 282 aaKnown RBP11.68□□□□□ -0.54
ACTN1-217ENST00000556203 MCUBQ9NWR8 336 aa11.68□□□□□ -0.54
ACTN1-217ENST00000556203 FBXL7Q9UJT9 491 aa11.68□□□□□ -0.54
ACTN1-217ENST00000556203 C14orf166Q9Y224 244 aaKnown RBP11.68□□□□□ -0.54
ACTN1-217ENST00000556203 TRAPPC2P0DI81 140 aa11.67□□□□□ -0.54
ACTN1-217ENST00000556203 TRAPPC2BP0DI82 140 aa11.67□□□□□ -0.54
ACTN1-217ENST00000556203 TRIM16LQ309B1 348 aa11.67□□□□□ -0.54
ACTN1-217ENST00000556203 SP6Q3SY56 376 aa11.67□□□□□ -0.54
ACTN1-217ENST00000556203 THOC7Q6I9Y2 204 aaKnown RBP11.67□□□□□ -0.54
ACTN1-217ENST00000556203 H2BFWTQ7Z2G1 175 aa11.67□□□□□ -0.54
ACTN1-217ENST00000556203 Q8N402 240 aa11.67□□□□□ -0.54
ACTN1-217ENST00000556203 OR10W1Q8NGF6 305 aa11.67□□□□□ -0.54
ACTN1-217ENST00000556203 TRIM63Q969Q1 353 aa11.67□□□□□ -0.54
ACTN1-217ENST00000556203 FANCD2OSQ96PS1 177 aa11.67□□□□□ -0.54
ACTN1-217ENST00000556203 RTBDNQ9BSG5 229 aaPredicted RBP11.67□□□□□ -0.54
ACTN1-217ENST00000556203 HINT2Q9BX68 163 aa11.67□□□□□ -0.54
ACTN1-217ENST00000556203 C5orf66Q9H5L9 145 aa11.67□□□□□ -0.54
ACTN1-217ENST00000556203 SLC2A8Q9NY64 477 aa11.67□□□□□ -0.54
ACTN1-217ENST00000556203 SCP2D1Q9UJQ7 156 aa11.67□□□□□ -0.54
ACTN1-217ENST00000556203 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.66□□□□□ -0.54
ACTN1-217ENST00000556203 WI2-2373I1.2A0A1W2PRP0 233 aa11.66□□□□□ -0.54
ACTN1-217ENST00000556203 DBX1A6NMT0 343 aa11.66□□□□□ -0.54
ACTN1-217ENST00000556203 C15orf61A6NNL5 157 aa11.66□□□□□ -0.54
ACTN1-217ENST00000556203 SAP30O75446 220 aa11.66□□□□□ -0.54
ACTN1-217ENST00000556203 NDUFB8O95169 186 aa11.66□□□□□ -0.54
ACTN1-217ENST00000556203 HIST1H1BP16401 226 aaKnown RBP11.66□□□□□ -0.54
ACTN1-217ENST00000556203 KLF9Q13886 244 aaPredicted RBP11.66□□□□□ -0.54
ACTN1-217ENST00000556203 OR6Q1Q8NGQ2 317 aa11.66□□□□□ -0.54
ACTN1-217ENST00000556203 OR5B3Q8NH48 314 aa11.66□□□□□ -0.54
ACTN1-217ENST00000556203 OR4A16Q8NH70 328 aa11.66□□□□□ -0.54
ACTN1-217ENST00000556203 LSM10Q969L4 123 aaKnown RBP11.66□□□□□ -0.54
ACTN1-217ENST00000556203 NDUFA4L2Q9NRX3 87 aa11.66□□□□□ -0.54
ACTN1-217ENST00000556203 TMEM14BQ9NUH8 114 aa11.66□□□□□ -0.54
ACTN1-217ENST00000556203 FKBP11Q9NYL4 201 aa11.66□□□□□ -0.54
ACTN1-217ENST00000556203 NDUFA13Q9P0J0 144 aa11.66□□□□□ -0.54
ACTN1-217ENST00000556203 ZMAT5Q9UDW3 170 aaKnown RBP11.66□□□□□ -0.54
ACTN1-217ENST00000556203 GPR132Q9UNW8 380 aa11.66□□□□□ -0.54
ACTN1-217ENST00000556203 IGLV11-55A0A075B6I3 123 aa11.65□□□□□ -0.54
ACTN1-217ENST00000556203 TEX13DA0A0J9YY54 714 aaPredicted RBP11.65□□□□□ -0.54
ACTN1-217ENST00000556203 K7EIL1 84 aa11.65□□□□□ -0.54
ACTN1-217ENST00000556203 IGHV3-23P01764 117 aa11.65□□□□□ -0.54
ACTN1-217ENST00000556203 OR13C7P0DN81 318 aa11.65□□□□□ -0.54
ACTN1-217ENST00000556203 UCP1P25874 307 aa11.65□□□□□ -0.54
ACTN1-217ENST00000556203 ETV6P41212 452 aa11.65□□□□□ -0.54
ACTN1-217ENST00000556203 INSL3P51460 131 aa11.65□□□□□ -0.54
ACTN1-217ENST00000556203 SYNJ2BPP57105 145 aa11.65□□□□□ -0.54
ACTN1-217ENST00000556203 WT1-ASQ06250 92 aa11.65□□□□□ -0.54
ACTN1-217ENST00000556203 KLF5Q13887 457 aaPredicted RBP11.65□□□□□ -0.54
ACTN1-217ENST00000556203 RPEL1Q2QD12 228 aa11.65□□□□□ -0.54
ACTN1-217ENST00000556203 KLK9Q2XQG4 91 aa11.65□□□□□ -0.54
ACTN1-217ENST00000556203 SPANXN2Q5MJ10 180 aa11.65□□□□□ -0.54
ACTN1-217ENST00000556203 ACSM6Q6P461 480 aa11.65□□□□□ -0.54
ACTN1-217ENST00000556203 HSD17B13Q7Z5P4 300 aaPredicted RBP11.65□□□□□ -0.54
ACTN1-217ENST00000556203 ZNF429Q86V71 674 aa11.65□□□□□ -0.54
ACTN1-217ENST00000556203 TOMM5Q8N4H5 51 aa11.65□□□□□ -0.54
ACTN1-217ENST00000556203 GDPD1Q8N9F7 314 aa11.65□□□□□ -0.54
ACTN1-217ENST00000556203 NAA60Q9H7X0 242 aa11.65□□□□□ -0.54
ACTN1-217ENST00000556203 KLK9Q9UKQ9 250 aa11.65□□□□□ -0.54
ACTN1-217ENST00000556203 S4R3C0 116 aa11.65□□□□□ -0.54
ACTN1-217ENST00000556203 BMPR1BO00238 502 aa11.64□□□□□ -0.55
ACTN1-217ENST00000556203 B3GALNT1O75752 331 aa11.64□□□□□ -0.55
ACTN1-217ENST00000556203 ATG12O94817 140 aa11.64□□□□□ -0.55
ACTN1-217ENST00000556203 IGKV1-5P01602 117 aa11.64□□□□□ -0.55
ACTN1-217ENST00000556203 OR5AC1P0C628 307 aa11.64□□□□□ -0.55
ACTN1-217ENST00000556203 FAUP35544 74 aaKnown RBP11.64□□□□□ -0.55
ACTN1-217ENST00000556203 MECP2P51608 486 aaKnown RBP11.64□□□□□ -0.55
ACTN1-217ENST00000556203 AKR1C2P52895 323 aa11.64□□□□□ -0.55
ACTN1-217ENST00000556203 AP3S2P59780 193 aa11.64□□□□□ -0.55
ACTN1-217ENST00000556203 IZUMO4Q1ZYL8 232 aa11.64□□□□□ -0.55
ACTN1-217ENST00000556203 EEF1AKMT3Q96AZ1 226 aa11.64□□□□□ -0.55
ACTN1-217ENST00000556203 ELOVL1Q9BW60 279 aa11.64□□□□□ -0.55
ACTN1-217ENST00000556203 SRRQ9GZT4 340 aa11.64□□□□□ -0.55
ACTN1-217ENST00000556203 DMRT1Q9Y5R6 373 aa11.64□□□□□ -0.55
ACTN1-217ENST00000556203 PRKDCP78527 4128 aaKnown RBP11.63□□□□□ -0.55
ACTN1-217ENST00000556203 CRYM-AS1A6NIL9 109 aa11.63□□□□□ -0.55
ACTN1-217ENST00000556203 FAM209BQ5JX69 171 aa11.63□□□□□ -0.55
ACTN1-217ENST00000556203 CCDC140Q96MF4 163 aa11.63□□□□□ -0.55
ACTN1-217ENST00000556203 TMEM56Q96MV1 263 aa11.63□□□□□ -0.55
ACTN1-217ENST00000556203 SCGB3A2Q96PL1 93 aa11.63□□□□□ -0.55
ACTN1-217ENST00000556203 OR4C12Q96R67 309 aa11.63□□□□□ -0.55
ACTN1-217ENST00000556203 MFSD2BA6NFX1 497 aa11.62□□□□□ -0.55
ACTN1-217ENST00000556203 PPP5D1E7EU14 171 aa11.62□□□□□ -0.55
ACTN1-217ENST00000556203 CYB5BO43169 146 aa11.62□□□□□ -0.55
ACTN1-217ENST00000556203 P0C879 139 aa11.62□□□□□ -0.55
ACTN1-217ENST00000556203 TATDN3Q17R31 274 aa11.62□□□□□ -0.55
ACTN1-217ENST00000556203 CLEC19AQ6UXS0 136 aa11.62□□□□□ -0.55
ACTN1-217ENST00000556203 OR9G4Q8NGQ1 327 aa11.62□□□□□ -0.55
ACTN1-217ENST00000556203 RNASE11Q8TAA1 199 aaKnown RBP11.62□□□□□ -0.55
ACTN1-217ENST00000556203 GLYATL2Q8WU03 294 aa11.62□□□□□ -0.55
ACTN1-217ENST00000556203 CXorf58Q96LI9 332 aa11.62□□□□□ -0.55
ACTN1-217ENST00000556203 PRR25Q96S07 402 aa11.62□□□□□ -0.55
ACTN1-217ENST00000556203 TMEM222Q9H0R3 208 aa11.62□□□□□ -0.55
ACTN1-217ENST00000556203 THYN1Q9P016 225 aa11.62□□□□□ -0.55
ACTN1-217ENST00000556203 F11RQ9Y624 299 aaKnown RBP11.62□□□□□ -0.55
ACTN1-217ENST00000556203 DNAH3Q8TD57 4116 aa11.62□□□□□ -0.55
ACTN1-217ENST00000556203 A0A0B4J293 547 aa11.61□□□□□ -0.55
ACTN1-217ENST00000556203 CDS2O95674 445 aa11.61□□□□□ -0.55
ACTN1-217ENST00000556203 HLA-AP01891 365 aaKnown RBP11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms