RNA–Protein interactions for RNA: ENST00000556079.1

TMEM260-209, Transcript of transmembrane protein 260, humanhuman

TSL 2

Gene TMEM260, Length 596 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-209ENST00000556079 A0A0G2JRQ6 117 aa4.83□□□□□ -1.64
TMEM260-209ENST00000556079 TEX50A0A1B0GTY4 177 aa4.83□□□□□ -1.64
TMEM260-209ENST00000556079 NPIPB5A8MRT5 1133 aa4.83□□□□□ -1.64
TMEM260-209ENST00000556079 H3BUA1 57 aa4.83□□□□□ -1.64
TMEM260-209ENST00000556079 ACTL6BO94805 426 aa4.83□□□□□ -1.64
TMEM260-209ENST00000556079 IGLV1-51P01701 117 aa4.83□□□□□ -1.64
TMEM260-209ENST00000556079 FRMD6-AS1P0C7T7 363 aa4.83□□□□□ -1.64
TMEM260-209ENST00000556079 ZNF182P17025 639 aaPredicted RBP4.83□□□□□ -1.64
TMEM260-209ENST00000556079 CTRB1P17538 263 aa4.83□□□□□ -1.64
TMEM260-209ENST00000556079 PSMB6P28072 239 aa4.83□□□□□ -1.64
TMEM260-209ENST00000556079 RCVRNP35243 200 aa4.83□□□□□ -1.64
TMEM260-209ENST00000556079 KIR2DS2P43631 304 aa4.83□□□□□ -1.64
TMEM260-209ENST00000556079 TAS2R46P59540 309 aa4.83□□□□□ -1.64
TMEM260-209ENST00000556079 WT1-ASQ06250 92 aa4.83□□□□□ -1.64
TMEM260-209ENST00000556079 RPEL1Q2QD12 228 aa4.83□□□□□ -1.64
TMEM260-209ENST00000556079 SP6Q3SY56 376 aa4.83□□□□□ -1.64
TMEM260-209ENST00000556079 CTRB2Q6GPI1 263 aa4.83□□□□□ -1.64
TMEM260-209ENST00000556079 UNQ9165/PRO28630Q6UXU0 137 aa4.83□□□□□ -1.64
TMEM260-209ENST00000556079 ZNF429Q86V71 674 aa4.83□□□□□ -1.64
TMEM260-209ENST00000556079 CROCCP3Q8IVE0 287 aa4.83□□□□□ -1.64
TMEM260-209ENST00000556079 DMBX1Q8NFW5 382 aa4.83□□□□□ -1.64
TMEM260-209ENST00000556079 OR9G4Q8NGQ1 327 aa4.83□□□□□ -1.64
TMEM260-209ENST00000556079 DYNC2LI1Q8TCX1 351 aa4.83□□□□□ -1.64
TMEM260-209ENST00000556079 DGCR14Q96DF8 476 aaKnown RBP4.83□□□□□ -1.64
TMEM260-209ENST00000556079 OR4C12Q96R67 309 aa4.83□□□□□ -1.64
TMEM260-209ENST00000556079 TP53RKQ96S44 253 aa4.83□□□□□ -1.64
TMEM260-209ENST00000556079 SPIN2AQ99865 258 aa4.83□□□□□ -1.64
TMEM260-209ENST00000556079 SPIN2BQ9BPZ2 258 aa4.83□□□□□ -1.64
TMEM260-209ENST00000556079 GPR61Q9BZJ8 451 aa4.83□□□□□ -1.64
TMEM260-209ENST00000556079 RANGRFQ9HD47 186 aaPredicted RBP4.83□□□□□ -1.64
TMEM260-209ENST00000556079 SLC2A9Q9NRM0 540 aa4.83□□□□□ -1.64
TMEM260-209ENST00000556079 BET1LQ9NYM9 111 aa4.83□□□□□ -1.64
TMEM260-209ENST00000556079 A0A0G2JLM5 398 aa4.82□□□□□ -1.64
TMEM260-209ENST00000556079 DPPA5A6NC42 116 aa4.82□□□□□ -1.64
TMEM260-209ENST00000556079 MARCH11A6NNE9 402 aa4.82□□□□□ -1.64
TMEM260-209ENST00000556079 H3BMQ9 156 aa4.82□□□□□ -1.64
TMEM260-209ENST00000556079 C3orf84H3BNL1 204 aa4.82□□□□□ -1.64
TMEM260-209ENST00000556079 GPR31O00270 319 aa4.82□□□□□ -1.64
TMEM260-209ENST00000556079 RBFOX2O43251 390 aaKnown RBP eCLIP4.82□□□□□ -1.64
TMEM260-209ENST00000556079 ZNF207O43670 478 aaKnown RBP4.82□□□□□ -1.64
TMEM260-209ENST00000556079 SLC22A5O76082 557 aa4.82□□□□□ -1.64
TMEM260-209ENST00000556079 HPRT1P00492 218 aa4.82□□□□□ -1.64
TMEM260-209ENST00000556079 HRASP01112 189 aa4.82□□□□□ -1.64
TMEM260-209ENST00000556079 IGKV1-5P01602 117 aa4.82□□□□□ -1.64
TMEM260-209ENST00000556079 CRYGCP07315 174 aa4.82□□□□□ -1.64
TMEM260-209ENST00000556079 NHLRC4P0CG21 123 aaPredicted RBP4.82□□□□□ -1.64
TMEM260-209ENST00000556079 OR13C7P0DN81 318 aa4.82□□□□□ -1.64
TMEM260-209ENST00000556079 IGHV4-30-4P0DP06 118 aa4.82□□□□□ -1.64
TMEM260-209ENST00000556079 PGAM2P15259 253 aa4.82□□□□□ -1.64
TMEM260-209ENST00000556079 NQO2P16083 231 aa4.82□□□□□ -1.64
TMEM260-209ENST00000556079 F2RP25116 425 aa4.82□□□□□ -1.64
TMEM260-209ENST00000556079 CD40LGP29965 261 aa4.82□□□□□ -1.64
TMEM260-209ENST00000556079 GPR183P32249 361 aa4.82□□□□□ -1.64
TMEM260-209ENST00000556079 TAS2R31P59538 309 aa4.82□□□□□ -1.64
TMEM260-209ENST00000556079 TSPAN5P62079 268 aa4.82□□□□□ -1.64
TMEM260-209ENST00000556079 CATR1Q13166 79 aa4.82□□□□□ -1.64
TMEM260-209ENST00000556079 MSMO1Q15800 293 aa4.82□□□□□ -1.64
TMEM260-209ENST00000556079 POU2AF1Q16633 256 aa4.82□□□□□ -1.64
TMEM260-209ENST00000556079 CD300EQ496F6 205 aaPredicted RBP4.82□□□□□ -1.64
TMEM260-209ENST00000556079 NECAP1Q8NC96 275 aa4.82□□□□□ -1.64
TMEM260-209ENST00000556079 OR6F1Q8NGZ6 308 aa4.82□□□□□ -1.64
TMEM260-209ENST00000556079 MARCH1Q8TCQ1 289 aa4.82□□□□□ -1.64
TMEM260-209ENST00000556079 THAP7Q9BT49 309 aaPredicted RBP4.82□□□□□ -1.64
TMEM260-209ENST00000556079 QTRT1Q9BXR0 403 aaKnown RBP4.82□□□□□ -1.64
TMEM260-209ENST00000556079 PLEKHA3Q9HB20 300 aa4.82□□□□□ -1.64
TMEM260-209ENST00000556079 ZNF257Q9Y2Q1 563 aa4.82□□□□□ -1.64
TMEM260-209ENST00000556079 OR51B2Q9Y5P1 312 aa4.82□□□□□ -1.64
TMEM260-209ENST00000556079 SMIM31A0A1B0GVY4 71 aa4.81□□□□□ -1.64
TMEM260-209ENST00000556079 TMEM213A2RRL7 107 aa4.81□□□□□ -1.64
TMEM260-209ENST00000556079 OR2T8A6NH00 312 aa4.81□□□□□ -1.64
TMEM260-209ENST00000556079 C2orf70A6NJV1 201 aa4.81□□□□□ -1.64
TMEM260-209ENST00000556079 FAM223BA6NKX1 122 aa4.81□□□□□ -1.64
TMEM260-209ENST00000556079 ZNF785A8K8V0 405 aa4.81□□□□□ -1.64
TMEM260-209ENST00000556079 RGS5O15539 181 aa4.81□□□□□ -1.64
TMEM260-209ENST00000556079 NXPH3O95157 252 aa4.81□□□□□ -1.64
TMEM260-209ENST00000556079 BRI3O95415 125 aa4.81□□□□□ -1.64
TMEM260-209ENST00000556079 CD7P09564 240 aa4.81□□□□□ -1.64
TMEM260-209ENST00000556079 TRAPPC2P0DI81 140 aa4.81□□□□□ -1.64
TMEM260-209ENST00000556079 TRAPPC2BP0DI82 140 aa4.81□□□□□ -1.64
TMEM260-209ENST00000556079 ZP3P21754 424 aa4.81□□□□□ -1.64
TMEM260-209ENST00000556079 ARL3P36405 182 aa4.81□□□□□ -1.64
TMEM260-209ENST00000556079 MECP2P51608 486 aaKnown RBP4.81□□□□□ -1.64
TMEM260-209ENST00000556079 SCGB2B2Q4G0G5 96 aa4.81□□□□□ -1.64
TMEM260-209ENST00000556079 CASC10Q5T4H9 136 aa4.81□□□□□ -1.64
TMEM260-209ENST00000556079 MZT2AQ6P582 158 aa4.81□□□□□ -1.64
TMEM260-209ENST00000556079 LHFPL1Q86WI0 220 aa4.81□□□□□ -1.64
TMEM260-209ENST00000556079 KRTAP19-1Q8IUB9 90 aa4.81□□□□□ -1.64
TMEM260-209ENST00000556079 FAM223AQ8IWN6 122 aa4.81□□□□□ -1.64
TMEM260-209ENST00000556079 DEFB125Q8N687 156 aa4.81□□□□□ -1.64
TMEM260-209ENST00000556079 ZBTB34Q8NCN2 500 aa4.81□□□□□ -1.64
TMEM260-209ENST00000556079 OR6Q1Q8NGQ2 317 aa4.81□□□□□ -1.64
TMEM260-209ENST00000556079 OR13C8Q8NGS7 320 aa4.81□□□□□ -1.64
TMEM260-209ENST00000556079 LHFPL5Q8TAF8 219 aa4.81□□□□□ -1.64
TMEM260-209ENST00000556079 ZNF502Q8TBZ5 544 aa4.81□□□□□ -1.64
TMEM260-209ENST00000556079 ISOC1Q96CN7 298 aa4.81□□□□□ -1.64
TMEM260-209ENST00000556079 SEC22AQ96IW7 307 aa4.81□□□□□ -1.64
TMEM260-209ENST00000556079 USMG5Q96IX5 58 aa4.81□□□□□ -1.64
TMEM260-209ENST00000556079 TMEM68Q96MH6 324 aa4.81□□□□□ -1.64
TMEM260-209ENST00000556079 FAM110AQ9BQ89 295 aa4.81□□□□□ -1.64
TMEM260-209ENST00000556079 CHRDL1Q9BU40 450 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms