RNA–Protein interactions for RNA: ENST00000555953.1

SCFD1-217, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 497 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-217ENST00000555953 ANKRD7Q92527 254 aa1.03□□□□□ -2.24
SCFD1-217ENST00000555953 SLC35B4Q969S0 331 aa1.03□□□□□ -2.24
SCFD1-217ENST00000555953 DOK5Q9P104 306 aa1.03□□□□□ -2.24
SCFD1-217ENST00000555953 FUT9Q9Y231 359 aa1.03□□□□□ -2.24
SCFD1-217ENST00000555953 RGS12O14924 1447 aa1.03□□□□□ -2.24
SCFD1-217ENST00000555953 MUC16Q8WXI7 14507 aa1.02□□□□□ -2.25
SCFD1-217ENST00000555953 F8W036 122 aa1.02□□□□□ -2.25
SCFD1-217ENST00000555953 I3L521 148 aa1.02□□□□□ -2.25
SCFD1-217ENST00000555953 PPBPP02775 128 aa1.02□□□□□ -2.25
SCFD1-217ENST00000555953 IFNA16P05015 189 aa1.02□□□□□ -2.25
SCFD1-217ENST00000555953 GLI3P10071 1580 aa1.02□□□□□ -2.25
SCFD1-217ENST00000555953 FGF6P10767 208 aa1.02□□□□□ -2.25
SCFD1-217ENST00000555953 S100A7P31151 101 aa1.02□□□□□ -2.25
SCFD1-217ENST00000555953 SULT1A1P50225 295 aa1.02□□□□□ -2.25
SCFD1-217ENST00000555953 SPCS3P61009 180 aa1.02□□□□□ -2.25
SCFD1-217ENST00000555953 PMAIP1Q13794 54 aa1.02□□□□□ -2.25
SCFD1-217ENST00000555953 Q6ZS49 121 aa1.02□□□□□ -2.25
SCFD1-217ENST00000555953 TMEM86AQ8N2M4 240 aa1.02□□□□□ -2.25
SCFD1-217ENST00000555953 RPP25LQ8N5L8 163 aaKnown RBP1.02□□□□□ -2.25
SCFD1-217ENST00000555953 CDC26Q8NHZ8 85 aa1.02□□□□□ -2.25
SCFD1-217ENST00000555953 ZNF563Q8TA94 476 aa1.02□□□□□ -2.25
SCFD1-217ENST00000555953 MRPL30Q8TCC3 161 aaKnown RBP1.02□□□□□ -2.25
SCFD1-217ENST00000555953 PPP1R14BQ96C90 147 aa1.02□□□□□ -2.25
SCFD1-217ENST00000555953 IMP4Q96G21 291 aaKnown RBP1.02□□□□□ -2.25
SCFD1-217ENST00000555953 ZNF625Q96I27 306 aaPredicted RBP1.02□□□□□ -2.25
SCFD1-217ENST00000555953 OR52E6Q96RD3 313 aa1.02□□□□□ -2.25
SCFD1-217ENST00000555953 OR8D2Q9GZM6 311 aa1.02□□□□□ -2.25
SCFD1-217ENST00000555953 CHST6Q9GZX3 395 aa1.02□□□□□ -2.25
SCFD1-217ENST00000555953 VCX3BQ9H321 246 aa1.02□□□□□ -2.25
SCFD1-217ENST00000555953 KIF13BQ9NQT8 1826 aa1.02□□□□□ -2.25
SCFD1-217ENST00000555953 C8orf4Q9NR00 106 aa1.02□□□□□ -2.25
SCFD1-217ENST00000555953 PAQR5Q9NXK6 330 aaPredicted RBP1.02□□□□□ -2.25
SCFD1-217ENST00000555953 HECW2Q9P2P5 1572 aa1.02□□□□□ -2.25
SCFD1-217ENST00000555953 TIMM22Q9Y584 194 aa1.02□□□□□ -2.25
SCFD1-217ENST00000555953 HEATR5AQ86XA9 2040 aa1.01□□□□□ -2.25
SCFD1-217ENST00000555953 DOCK5Q9H7D0 1870 aa1.01□□□□□ -2.25
SCFD1-217ENST00000555953 HECW1Q76N89 1606 aa1.01□□□□□ -2.25
SCFD1-217ENST00000555953 HELZ2Q9BYK8 2649 aaKnown RBP1.01□□□□□ -2.25
SCFD1-217ENST00000555953 A0A0D9SEW6 157 aa1.01□□□□□ -2.25
SCFD1-217ENST00000555953 A0A0J9YY10 115 aa1.01□□□□□ -2.25
SCFD1-217ENST00000555953 A0A1B0GX78 115 aa1.01□□□□□ -2.25
SCFD1-217ENST00000555953 OR51F1A6NGY5 319 aa1.01□□□□□ -2.25
SCFD1-217ENST00000555953 EEF1E1-BLOC1S5C9J1V9 151 aa1.01□□□□□ -2.25
SCFD1-217ENST00000555953 IGHV3-7P01780 117 aa1.01□□□□□ -2.25
SCFD1-217ENST00000555953 TFPTP0C1Z6 253 aa1.01□□□□□ -2.25
SCFD1-217ENST00000555953 CTXN2P0C2S0 81 aa1.01□□□□□ -2.25
SCFD1-217ENST00000555953 CD79AP11912 226 aa1.01□□□□□ -2.25
SCFD1-217ENST00000555953 GPX2P18283 190 aa1.01□□□□□ -2.25
SCFD1-217ENST00000555953 NFYAP23511 347 aaPredicted RBP1.01□□□□□ -2.25
SCFD1-217ENST00000555953 HOXA6P31267 233 aa1.01□□□□□ -2.25
SCFD1-217ENST00000555953 CEBPGP53567 150 aa1.01□□□□□ -2.25
SCFD1-217ENST00000555953 ERVS71-1P61550 626 aa1.01□□□□□ -2.25
SCFD1-217ENST00000555953 AESQ08117 197 aa1.01□□□□□ -2.25
SCFD1-217ENST00000555953 GRK1Q15835 563 aa1.01□□□□□ -2.25
SCFD1-217ENST00000555953 RGS21Q2M5E4 152 aa1.01□□□□□ -2.25
SCFD1-217ENST00000555953 COA5Q86WW8 74 aa1.01□□□□□ -2.25
SCFD1-217ENST00000555953 CCDC42Q96M95 316 aa1.01□□□□□ -2.25
SCFD1-217ENST00000555953 PRAP1Q96NZ9 151 aa1.01□□□□□ -2.25
SCFD1-217ENST00000555953 ERMAPQ96PL5 475 aaPredicted RBP1.01□□□□□ -2.25
SCFD1-217ENST00000555953 HSPB9Q9BQS6 159 aa1.01□□□□□ -2.25
SCFD1-217ENST00000555953 EFCAB1Q9HAE3 211 aa1.01□□□□□ -2.25
SCFD1-217ENST00000555953 IL36BQ9NZH7 164 aa1.01□□□□□ -2.25
SCFD1-217ENST00000555953 NAT8Q9UHE5 227 aa1.01□□□□□ -2.25
SCFD1-217ENST00000555953 AMMECR1Q9Y4X0 333 aaPredicted RBP1.01□□□□□ -2.25
SCFD1-217ENST00000555953 PRRC2BQ5JSZ5 2229 aaKnown RBP1□□□□□ -2.25
SCFD1-217ENST00000555953 NCOA1Q15788 1441 aa1□□□□□ -2.25
SCFD1-217ENST00000555953 TRBV20OR9-2A0A075B6H5 130 aa1□□□□□ -2.25
SCFD1-217ENST00000555953 TRGV2A0A075B6R0 118 aa1□□□□□ -2.25
SCFD1-217ENST00000555953 TRBV10-2A0A0K0K1G8 114 aa1□□□□□ -2.25
SCFD1-217ENST00000555953 IRGMA1A4Y4 181 aa1□□□□□ -2.25
SCFD1-217ENST00000555953 MEIS3P1A6NDR6 274 aa1□□□□□ -2.25
SCFD1-217ENST00000555953 SMIM9A6NGZ8 99 aa1□□□□□ -2.25
SCFD1-217ENST00000555953 TRAPPC2LH3BP13 241 aa1□□□□□ -2.25
SCFD1-217ENST00000555953 PSMD12O00232 456 aaPredicted RBP1□□□□□ -2.25
SCFD1-217ENST00000555953 CHP2O43745 196 aa1□□□□□ -2.25
SCFD1-217ENST00000555953 CIAO1O76071 339 aa1□□□□□ -2.25
SCFD1-217ENST00000555953 TNNC2P02585 160 aa1□□□□□ -2.25
SCFD1-217ENST00000555953 ZNF705DP0CH99 300 aaPredicted RBP1□□□□□ -2.25
SCFD1-217ENST00000555953 ARL14EPLP0DKL9 152 aa1□□□□□ -2.25
SCFD1-217ENST00000555953 SULT1A3P0DMM9 295 aa1□□□□□ -2.25
SCFD1-217ENST00000555953 SULT1A4P0DMN0 295 aa1□□□□□ -2.25
SCFD1-217ENST00000555953 DEFA4P12838 97 aa1□□□□□ -2.25
SCFD1-217ENST00000555953 HLA-DMBP28068 263 aa1□□□□□ -2.25
SCFD1-217ENST00000555953 EVX1P49640 407 aa1□□□□□ -2.25
SCFD1-217ENST00000555953 AQP4P55087 323 aa1□□□□□ -2.25
SCFD1-217ENST00000555953 CCL20P78556 96 aa1□□□□□ -2.25
SCFD1-217ENST00000555953 NDUFA5Q16718 116 aa1□□□□□ -2.25
SCFD1-217ENST00000555953 GUK1Q16774 197 aa1□□□□□ -2.25
SCFD1-217ENST00000555953 TMEM155Q4W5P6 130 aa1□□□□□ -2.25
SCFD1-217ENST00000555953 HIST2H3PS2Q5TEC6 136 aa1□□□□□ -2.25
SCFD1-217ENST00000555953 FAM27BQ5VT28 67 aa1□□□□□ -2.25
SCFD1-217ENST00000555953 LRRC25Q8N386 305 aaPredicted RBP1□□□□□ -2.25
SCFD1-217ENST00000555953 ACOT12Q8WYK0 555 aa1□□□□□ -2.25
SCFD1-217ENST00000555953 PPP1R2P1Q96PQ5 205 aa1□□□□□ -2.25
SCFD1-217ENST00000555953 WDR61Q9GZS3 305 aaKnown RBP1□□□□□ -2.25
SCFD1-217ENST00000555953 OR51V1Q9H2C8 321 aa1□□□□□ -2.25
SCFD1-217ENST00000555953 CST9LQ9H4G1 147 aa1□□□□□ -2.25
SCFD1-217ENST00000555953 TP73-AS1Q9UF72 201 aa1□□□□□ -2.25
SCFD1-217ENST00000555953 TOPBP1Q92547 1522 aa0.99□□□□□ -2.25
SCFD1-217ENST00000555953 CCDC144AA2RUR9 1427 aa0.99□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms