RNA–Protein interactions for RNA: ENST00000555550.1

SCFD1-216, Transcript of sec1 family domain containing 1, humanhuman

TSL 4

Gene SCFD1, Length 541 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-216ENST00000555550 TRBV6-5A0A0K0K1A5 114 aa0.53□□□□□ -2.32
SCFD1-216ENST00000555550 A0A1B0GW54 56 aa0.53□□□□□ -2.32
SCFD1-216ENST00000555550 GRIFINA4D1Z8 144 aa0.53□□□□□ -2.32
SCFD1-216ENST00000555550 CLDN24A6NM45 220 aa0.53□□□□□ -2.32
SCFD1-216ENST00000555550 SSNA1O43805 119 aa0.53□□□□□ -2.32
SCFD1-216ENST00000555550 TTRP02766 147 aa0.53□□□□□ -2.32
SCFD1-216ENST00000555550 CALB1P05937 261 aa0.53□□□□□ -2.32
SCFD1-216ENST00000555550 TFPTP0C1Z6 253 aa0.53□□□□□ -2.32
SCFD1-216ENST00000555550 DEFA4P12838 97 aa0.53□□□□□ -2.32
SCFD1-216ENST00000555550 ATP6V0CP27449 155 aa0.53□□□□□ -2.32
SCFD1-216ENST00000555550 HAAOP46952 286 aa0.53□□□□□ -2.32
SCFD1-216ENST00000555550 CAPZBP47756 277 aa0.53□□□□□ -2.32
SCFD1-216ENST00000555550 IDH3GP51553 393 aaPredicted RBP0.53□□□□□ -2.32
SCFD1-216ENST00000555550 TAS2R30P59541 319 aa0.53□□□□□ -2.32
SCFD1-216ENST00000555550 FADDQ13158 208 aa0.53□□□□□ -2.32
SCFD1-216ENST00000555550 MIAQ16674 131 aa0.53□□□□□ -2.32
SCFD1-216ENST00000555550 LPCAT3Q6P1A2 487 aa0.53□□□□□ -2.32
SCFD1-216ENST00000555550 UNQ6190/PRO20217Q6UXQ8 127 aa0.53□□□□□ -2.32
SCFD1-216ENST00000555550 SSX8Q7RTT4 187 aa0.53□□□□□ -2.32
SCFD1-216ENST00000555550 CLDN22Q8N7P3 220 aa0.53□□□□□ -2.32
SCFD1-216ENST00000555550 ZNF439Q8NDP4 499 aa0.53□□□□□ -2.32
SCFD1-216ENST00000555550 OR13C8Q8NGS7 320 aa0.53□□□□□ -2.32
SCFD1-216ENST00000555550 ANKRD7Q92527 254 aa0.53□□□□□ -2.32
SCFD1-216ENST00000555550 DIRAS2Q96HU8 199 aa0.53□□□□□ -2.32
SCFD1-216ENST00000555550 PPP1R2P1Q96PQ5 205 aa0.53□□□□□ -2.32
SCFD1-216ENST00000555550 NMNAT3Q96T66 252 aa0.53□□□□□ -2.32
SCFD1-216ENST00000555550 VCX3BQ9H321 246 aa0.53□□□□□ -2.32
SCFD1-216ENST00000555550 OR51I2Q9H344 312 aa0.53□□□□□ -2.32
SCFD1-216ENST00000555550 C8orf4Q9NR00 106 aa0.53□□□□□ -2.32
SCFD1-216ENST00000555550 FGFR1OP2Q9NVK5 253 aa0.53□□□□□ -2.32
SCFD1-216ENST00000555550 SSPOA2VEC9 5147 aa0.53□□□□□ -2.32
SCFD1-216ENST00000555550 NUP155O75694 1391 aa0.53□□□□□ -2.32
SCFD1-216ENST00000555550 PIK3C2GO75747 1445 aa0.53□□□□□ -2.32
SCFD1-216ENST00000555550 ANKHD1Q8IWZ3 2542 aaKnown RBP0.53□□□□□ -2.33
SCFD1-216ENST00000555550 TMSB15BA0A087X1C1 80 aa0.52□□□□□ -2.33
SCFD1-216ENST00000555550 A0A0J9YY10 115 aa0.52□□□□□ -2.33
SCFD1-216ENST00000555550 FAM236DA0A1B0GTK5 79 aa0.52□□□□□ -2.33
SCFD1-216ENST00000555550 A0A1B0GX78 115 aa0.52□□□□□ -2.33
SCFD1-216ENST00000555550 OR51F1A6NGY5 319 aa0.52□□□□□ -2.33
SCFD1-216ENST00000555550 BUB1B-PAK6H3BSN5 160 aa0.52□□□□□ -2.33
SCFD1-216ENST00000555550 FAAHO00519 579 aa0.52□□□□□ -2.33
SCFD1-216ENST00000555550 LEPROTO15243 131 aa0.52□□□□□ -2.33
SCFD1-216ENST00000555550 OR2J2O76002 312 aa0.52□□□□□ -2.33
SCFD1-216ENST00000555550 C1QCP02747 245 aa0.52□□□□□ -2.33
SCFD1-216ENST00000555550 SHBGP04278 402 aa0.52□□□□□ -2.33
SCFD1-216ENST00000555550 LGALS1P09382 135 aaKnown RBP0.52□□□□□ -2.33
SCFD1-216ENST00000555550 FAM236CP0DP71 79 aa0.52□□□□□ -2.33
SCFD1-216ENST00000555550 CDKN2CP42773 168 aa0.52□□□□□ -2.33
SCFD1-216ENST00000555550 ZNF80P51504 273 aaPredicted RBP0.52□□□□□ -2.33
SCFD1-216ENST00000555550 TCL1AP56279 114 aa0.52□□□□□ -2.33
SCFD1-216ENST00000555550 RPS20P60866 119 aaKnown RBP0.52□□□□□ -2.33
SCFD1-216ENST00000555550 BTN3A2P78410 334 aa0.52□□□□□ -2.33
SCFD1-216ENST00000555550 CCL20P78556 96 aa0.52□□□□□ -2.33
SCFD1-216ENST00000555550 IAH1Q2TAA2 248 aaPredicted RBP0.52□□□□□ -2.33
SCFD1-216ENST00000555550 PABPC1L2AQ5JQF8 200 aa0.52□□□□□ -2.33
SCFD1-216ENST00000555550 OGFRL1Q5TC84 451 aaPredicted RBP0.52□□□□□ -2.33
SCFD1-216ENST00000555550 TMEM42Q69YG0 159 aa0.52□□□□□ -2.33
SCFD1-216ENST00000555550 C8orf74Q6P047 294 aa0.52□□□□□ -2.33
SCFD1-216ENST00000555550 LYZL1Q6UWQ5 148 aa0.52□□□□□ -2.33
SCFD1-216ENST00000555550 RASSF6Q6ZTQ3 369 aa0.52□□□□□ -2.33
SCFD1-216ENST00000555550 OR5B17Q8NGF7 314 aa0.52□□□□□ -2.33
SCFD1-216ENST00000555550 C20orf27Q9GZN8 174 aa0.52□□□□□ -2.33
SCFD1-216ENST00000555550 CXorf21Q9HAI6 301 aa0.52□□□□□ -2.33
SCFD1-216ENST00000555550 GPR84Q9NQS5 396 aa0.52□□□□□ -2.33
SCFD1-216ENST00000555550 UBAP1Q9NZ09 502 aa0.52□□□□□ -2.33
SCFD1-216ENST00000555550 AK3Q9UIJ7 227 aa0.52□□□□□ -2.33
SCFD1-216ENST00000555550 SLC22A13Q9Y226 551 aa0.52□□□□□ -2.33
SCFD1-216ENST00000555550 PKIGQ9Y2B9 76 aa0.52□□□□□ -2.33
SCFD1-216ENST00000555550 LHFPL6Q9Y693 200 aa0.52□□□□□ -2.33
SCFD1-216ENST00000555550 KIF24Q5T7B8 1368 aa0.52□□□□□ -2.33
SCFD1-216ENST00000555550 GLI3P10071 1580 aa0.52□□□□□ -2.33
SCFD1-216ENST00000555550 PTPRBP23467 1997 aa0.52□□□□□ -2.33
SCFD1-216ENST00000555550 DOCK3Q8IZD9 2030 aa0.52□□□□□ -2.33
SCFD1-216ENST00000555550 RYR2Q92736 4967 aa0.52□□□□□ -2.33
SCFD1-216ENST00000555550 IGHV3-64A0A075B6Q5 118 aa0.51□□□□□ -2.33
SCFD1-216ENST00000555550 TRAV7A0A075B6U4 112 aa0.51□□□□□ -2.33
SCFD1-216ENST00000555550 TRAV26-2A0A0B4J265 109 aa0.51□□□□□ -2.33
SCFD1-216ENST00000555550 IGHV1-18A0A0C4DH31 117 aa0.51□□□□□ -2.33
SCFD1-216ENST00000555550 IGKV1-9A0A0C4DH69 117 aa0.51□□□□□ -2.33
SCFD1-216ENST00000555550 PQLC2LA1A4F0 135 aa0.51□□□□□ -2.33
SCFD1-216ENST00000555550 IBA57-AS1B1ANH7 110 aa0.51□□□□□ -2.33
SCFD1-216ENST00000555550 CIAO1O76071 339 aa0.51□□□□□ -2.33
SCFD1-216ENST00000555550 CNIH1O95406 144 aa0.51□□□□□ -2.33
SCFD1-216ENST00000555550 ZNF682O95780 498 aa0.51□□□□□ -2.33
SCFD1-216ENST00000555550 C1QAP02745 245 aa0.51□□□□□ -2.33
SCFD1-216ENST00000555550 C1QBP02746 253 aa0.51□□□□□ -2.33
SCFD1-216ENST00000555550 PSMB8P28062 276 aa0.51□□□□□ -2.33
SCFD1-216ENST00000555550 CA5AP35218 305 aa0.51□□□□□ -2.33
SCFD1-216ENST00000555550 RPL5P46777 297 aaKnown RBP0.51□□□□□ -2.33
SCFD1-216ENST00000555550 RPL28P46779 137 aaKnown RBP0.51□□□□□ -2.33
SCFD1-216ENST00000555550 AP2S1P53680 142 aaPredicted RBP0.51□□□□□ -2.33
SCFD1-216ENST00000555550 SNRPD2P62316 118 aaKnown RBP0.51□□□□□ -2.33
SCFD1-216ENST00000555550 AESQ08117 197 aa0.51□□□□□ -2.33
SCFD1-216ENST00000555550 ITGB3BPQ13352 177 aaPredicted RBP0.51□□□□□ -2.33
SCFD1-216ENST00000555550 NCOA1Q15788 1441 aa0.51□□□□□ -2.33
SCFD1-216ENST00000555550 GREB1Q4ZG55 1949 aa0.51□□□□□ -2.33
SCFD1-216ENST00000555550 C5orf46Q6UWT4 87 aa0.51□□□□□ -2.33
SCFD1-216ENST00000555550 OR52R1Q8NGF1 315 aa0.51□□□□□ -2.33
SCFD1-216ENST00000555550 OR52L1Q8NGH7 329 aa0.51□□□□□ -2.33
SCFD1-216ENST00000555550 OR51T1Q8NGJ9 327 aa0.51□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms