RNA–Protein interactions for RNA: ENST00000555402.1

VRK1-205, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 415 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-205ENST00000555402 GPR119Q8TDV5 335 aa2.58□□□□□ -2
VRK1-205ENST00000555402 SKA2Q8WVK7 121 aaPredicted RBP2.58□□□□□ -2
VRK1-205ENST00000555402 PBDC1Q9BVG4 233 aa2.58□□□□□ -2
VRK1-205ENST00000555402 MAP1LC3BQ9GZQ8 125 aa2.58□□□□□ -2
VRK1-205ENST00000555402 TMEM222Q9H0R3 208 aa2.58□□□□□ -2
VRK1-205ENST00000555402 LYRM2Q9NU23 88 aaPredicted RBP2.58□□□□□ -2
VRK1-205ENST00000555402 GSKIPQ9P0R6 139 aa2.58□□□□□ -2
VRK1-205ENST00000555402 TMEM56-RWDD3S4R434 201 aa2.58□□□□□ -2
VRK1-205ENST00000555402 ATAD5Q96QE3 1844 aa2.58□□□□□ -2
VRK1-205ENST00000555402 SETD5Q9C0A6 1442 aa2.58□□□□□ -2
VRK1-205ENST00000555402 CHD5Q8TDI0 1954 aa2.58□□□□□ -2
VRK1-205ENST00000555402 ZCCHC11Q5TAX3 1644 aaKnown RBP2.57□□□□□ -2
VRK1-205ENST00000555402 LOC102725191A0A1B0GVB3 256 aa2.57□□□□□ -2
VRK1-205ENST00000555402 SDHAF1A6NFY7 115 aa2.57□□□□□ -2
VRK1-205ENST00000555402 G3V3Q6 166 aa2.57□□□□□ -2
VRK1-205ENST00000555402 PFDN1O60925 122 aa2.57□□□□□ -2
VRK1-205ENST00000555402 C8GP07360 202 aa2.57□□□□□ -2
VRK1-205ENST00000555402 LGALS3P17931 250 aaKnown RBP2.57□□□□□ -2
VRK1-205ENST00000555402 SPI1P17947 270 aa2.57□□□□□ -2
VRK1-205ENST00000555402 OPRM1P35372 400 aa2.57□□□□□ -2
VRK1-205ENST00000555402 GLRXP35754 106 aa2.57□□□□□ -2
VRK1-205ENST00000555402 DEFA3P59666 94 aa2.57□□□□□ -2
VRK1-205ENST00000555402 NCALDP61601 193 aa2.57□□□□□ -2
VRK1-205ENST00000555402 SURF2Q15527 256 aaPredicted RBP2.57□□□□□ -2
VRK1-205ENST00000555402 C9orf64Q5T6V5 341 aa2.57□□□□□ -2
VRK1-205ENST00000555402 DCUN1D2Q6PH85 259 aa2.57□□□□□ -2
VRK1-205ENST00000555402 FAM24BQ8N5W8 94 aa2.57□□□□□ -2
VRK1-205ENST00000555402 OR5C1Q8NGR4 320 aa2.57□□□□□ -2
VRK1-205ENST00000555402 RAB2BQ8WUD1 216 aa2.57□□□□□ -2
VRK1-205ENST00000555402 C12orf43Q96C57 262 aaKnown RBP2.57□□□□□ -2
VRK1-205ENST00000555402 ERMAPQ96PL5 475 aaPredicted RBP2.57□□□□□ -2
VRK1-205ENST00000555402 SH3BGRL3Q9H299 93 aa2.57□□□□□ -2
VRK1-205ENST00000555402 GPR84Q9NQS5 396 aa2.57□□□□□ -2
VRK1-205ENST00000555402 ACER3Q9NUN7 267 aa2.57□□□□□ -2
VRK1-205ENST00000555402 TAAR3PQ9P1P4 343 aa2.57□□□□□ -2
VRK1-205ENST00000555402 SSR3Q9UNL2 185 aa2.57□□□□□ -2
VRK1-205ENST00000555402 LTBP4Q8N2S1 1624 aa2.57□□□□□ -2
VRK1-205ENST00000555402 VIRMAQ69YN4 1812 aaKnown RBP2.56□□□□□ -2
VRK1-205ENST00000555402 A8MUN3 132 aa2.56□□□□□ -2
VRK1-205ENST00000555402 H7C1C5 153 aa2.56□□□□□ -2
VRK1-205ENST00000555402 ZNF682O95780 498 aa2.56□□□□□ -2
VRK1-205ENST00000555402 CD7P09564 240 aa2.56□□□□□ -2
VRK1-205ENST00000555402 TPI1P60174 286 aa2.56□□□□□ -2
VRK1-205ENST00000555402 LCN6P62502 163 aa2.56□□□□□ -2
VRK1-205ENST00000555402 MEF2BQ02080 365 aaPredicted RBP2.56□□□□□ -2
VRK1-205ENST00000555402 RHEBQ15382 184 aa2.56□□□□□ -2
VRK1-205ENST00000555402 MRPL51Q4U2R6 128 aaKnown RBP2.56□□□□□ -2
VRK1-205ENST00000555402 IBA57Q5T440 356 aaKnown RBP2.56□□□□□ -2
VRK1-205ENST00000555402 GLT8D1Q68CQ7 371 aa2.56□□□□□ -2
VRK1-205ENST00000555402 SDIM1Q6ZPB5 146 aa2.56□□□□□ -2
VRK1-205ENST00000555402 ST6GALNAC3Q8NDV1 305 aa2.56□□□□□ -2
VRK1-205ENST00000555402 MRPL30Q8TCC3 161 aaKnown RBP2.56□□□□□ -2
VRK1-205ENST00000555402 LZICQ8WZA0 190 aa2.56□□□□□ -2
VRK1-205ENST00000555402 MGLLQ99685 303 aa2.56□□□□□ -2
VRK1-205ENST00000555402 CCDC90BQ9GZT6 254 aa2.56□□□□□ -2
VRK1-205ENST00000555402 MYH2Q9UKX2 1941 aa2.56□□□□□ -2
VRK1-205ENST00000555402 A0A0J9YY10 115 aa2.55□□□□□ -2
VRK1-205ENST00000555402 A0A1B0GX78 115 aa2.55□□□□□ -2
VRK1-205ENST00000555402 ORC5O43913 435 aa2.55□□□□□ -2
VRK1-205ENST00000555402 NDUFC2O95298 119 aa2.55□□□□□ -2
VRK1-205ENST00000555402 RBP1P09455 135 aa2.55□□□□□ -2
VRK1-205ENST00000555402 ATP6V0CP27449 155 aa2.55□□□□□ -2
VRK1-205ENST00000555402 ZNF140P52738 457 aaPredicted RBP2.55□□□□□ -2
VRK1-205ENST00000555402 FGF12P61328 243 aa2.55□□□□□ -2
VRK1-205ENST00000555402 HTR4Q13639 388 aa2.55□□□□□ -2
VRK1-205ENST00000555402 TMEM128Q5BJH2 165 aa2.55□□□□□ -2
VRK1-205ENST00000555402 TOMM20LQ6UXN7 152 aa2.55□□□□□ -2
VRK1-205ENST00000555402 OR4K13Q8NH42 304 aa2.55□□□□□ -2
VRK1-205ENST00000555402 C11orf40Q8WZ69 217 aa2.55□□□□□ -2
VRK1-205ENST00000555402 RMND5BQ96G75 393 aaPredicted RBP2.55□□□□□ -2
VRK1-205ENST00000555402 TONSLQ96HA7 1378 aa2.55□□□□□ -2
VRK1-205ENST00000555402 CAPZA3Q96KX2 299 aa2.55□□□□□ -2
VRK1-205ENST00000555402 DNAJC30Q96LL9 226 aa2.55□□□□□ -2
VRK1-205ENST00000555402 NMNAT3Q96T66 252 aa2.55□□□□□ -2
VRK1-205ENST00000555402 SERPINI1Q99574 410 aa2.55□□□□□ -2
VRK1-205ENST00000555402 TMEM70Q9BUB7 260 aa2.55□□□□□ -2
VRK1-205ENST00000555402 WDR61Q9GZS3 305 aaKnown RBP2.55□□□□□ -2
VRK1-205ENST00000555402 C11orf68Q9H3H3 251 aaKnown RBP2.55□□□□□ -2
VRK1-205ENST00000555402 LRTM1Q9HBL6 345 aa2.55□□□□□ -2
VRK1-205ENST00000555402 FBXL12Q9NXK8 326 aa2.55□□□□□ -2
VRK1-205ENST00000555402 AK3Q9UIJ7 227 aa2.55□□□□□ -2
VRK1-205ENST00000555402 HSPE1-MOB4S4R3N1 261 aa2.55□□□□□ -2
VRK1-205ENST00000555402 PLXNB1O43157 2135 aa2.54□□□□□ -2
VRK1-205ENST00000555402 DICER1Q9UPY3 1922 aaKnown RBP2.54□□□□□ -2
VRK1-205ENST00000555402 REREQ9P2R6 1566 aa2.54□□□□□ -2
VRK1-205ENST00000555402 TRAV4A0A0B4J268 109 aa2.54□□□□□ -2
VRK1-205ENST00000555402 A0A1W2PRE2 83 aa2.54□□□□□ -2
VRK1-205ENST00000555402 C17orf98A8MV24 154 aa2.54□□□□□ -2
VRK1-205ENST00000555402 E7EQ34 232 aa2.54□□□□□ -2
VRK1-205ENST00000555402 KPNA4O00629 521 aaPredicted RBP2.54□□□□□ -2
VRK1-205ENST00000555402 ZNF73O43830 326 aaPredicted RBP2.54□□□□□ -2
VRK1-205ENST00000555402 BANF1O75531 89 aa2.54□□□□□ -2
VRK1-205ENST00000555402 OR10J4P0C629 311 aa2.54□□□□□ -2
VRK1-205ENST00000555402 SLC25A16P16260 332 aa2.54□□□□□ -2
VRK1-205ENST00000555402 PPIBP23284 216 aaKnown RBP2.54□□□□□ -2
VRK1-205ENST00000555402 LPAR6P43657 344 aa2.54□□□□□ -2
VRK1-205ENST00000555402 ATP5G3P48201 142 aa2.54□□□□□ -2
VRK1-205ENST00000555402 PSPHP78330 225 aa2.54□□□□□ -2
VRK1-205ENST00000555402 HOXC5Q00444 222 aa2.54□□□□□ -2
VRK1-205ENST00000555402 CCDC153Q494R4 210 aa2.54□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms