RNA–Protein interactions for RNA: ENST00000554928.1

SYNE2-214, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 1,048 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-214ENST00000554928 CRYGCP07315 174 aa9.51□□□□□ -0.89
SYNE2-214ENST00000554928 CTRB1P17538 263 aa9.51□□□□□ -0.89
SYNE2-214ENST00000554928 UCP1P25874 307 aa9.51□□□□□ -0.89
SYNE2-214ENST00000554928 PSMB6P28072 239 aa9.51□□□□□ -0.89
SYNE2-214ENST00000554928 S100GP29377 79 aa9.51□□□□□ -0.89
SYNE2-214ENST00000554928 WT1-ASQ06250 92 aa9.51□□□□□ -0.89
SYNE2-214ENST00000554928 ZNF616Q08AN1 781 aa9.51□□□□□ -0.89
SYNE2-214ENST00000554928 CTRB2Q6GPI1 263 aa9.51□□□□□ -0.89
SYNE2-214ENST00000554928 GDPD1Q8N9F7 314 aa9.51□□□□□ -0.89
SYNE2-214ENST00000554928 CCDC71LQ8N9Z2 235 aa9.51□□□□□ -0.89
SYNE2-214ENST00000554928 GLYATL2Q8WU03 294 aa9.51□□□□□ -0.89
SYNE2-214ENST00000554928 DLX4Q92988 240 aaPredicted RBP9.51□□□□□ -0.89
SYNE2-214ENST00000554928 AIFM2Q9BRQ8 373 aa9.51□□□□□ -0.89
SYNE2-214ENST00000554928 HINT2Q9BX68 163 aa9.51□□□□□ -0.89
SYNE2-214ENST00000554928 COMMD5Q9GZQ3 224 aa9.51□□□□□ -0.89
SYNE2-214ENST00000554928 NAA60Q9H7X0 242 aa9.51□□□□□ -0.89
SYNE2-214ENST00000554928 NDUFA4L2Q9NRX3 87 aa9.51□□□□□ -0.89
SYNE2-214ENST00000554928 C14orf166Q9Y224 244 aaKnown RBP9.51□□□□□ -0.89
SYNE2-214ENST00000554928 OR51B2Q9Y5P1 312 aa9.51□□□□□ -0.89
SYNE2-214ENST00000554928 C13orf42A0A1B0GVH6 325 aa9.5□□□□□ -0.89
SYNE2-214ENST00000554928 C15orf61A6NNL5 157 aa9.5□□□□□ -0.89
SYNE2-214ENST00000554928 LINC01619G3V211 115 aa9.5□□□□□ -0.89
SYNE2-214ENST00000554928 IGHV3-23P01764 117 aa9.5□□□□□ -0.89
SYNE2-214ENST00000554928 CD40LGP29965 261 aa9.5□□□□□ -0.89
SYNE2-214ENST00000554928 MFAP2P55001 183 aa9.5□□□□□ -0.89
SYNE2-214ENST00000554928 SUPT4H1P63272 117 aaKnown RBP9.5□□□□□ -0.89
SYNE2-214ENST00000554928 SURF2Q15527 256 aaPredicted RBP9.5□□□□□ -0.89
SYNE2-214ENST00000554928 TRIM16LQ309B1 348 aa9.5□□□□□ -0.89
SYNE2-214ENST00000554928 SPINK9Q5DT21 86 aa9.5□□□□□ -0.89
SYNE2-214ENST00000554928 ZNF57Q68EA5 555 aaPredicted RBP9.5□□□□□ -0.89
SYNE2-214ENST00000554928 Q6ZRM9 215 aa9.5□□□□□ -0.89
SYNE2-214ENST00000554928 RCC1LQ96I51 464 aaKnown RBP9.5□□□□□ -0.89
SYNE2-214ENST00000554928 QTRT1Q9BXR0 403 aaKnown RBP9.5□□□□□ -0.89
SYNE2-214ENST00000554928 TMEM14BQ9NUH8 114 aa9.5□□□□□ -0.89
SYNE2-214ENST00000554928 SCP2D1Q9UJQ7 156 aa9.5□□□□□ -0.89
SYNE2-214ENST00000554928 ZNF257Q9Y2Q1 563 aa9.5□□□□□ -0.89
SYNE2-214ENST00000554928 IGLV11-55A0A075B6I3 123 aa9.49□□□□□ -0.89
SYNE2-214ENST00000554928 A0A0B4J293 547 aa9.49□□□□□ -0.89
SYNE2-214ENST00000554928 TEX13DA0A0J9YY54 714 aaPredicted RBP9.49□□□□□ -0.89
SYNE2-214ENST00000554928 HSPB1P04792 205 aaKnown RBP9.49□□□□□ -0.89
SYNE2-214ENST00000554928 TRAPPC2P0DI81 140 aa9.49□□□□□ -0.89
SYNE2-214ENST00000554928 TRAPPC2BP0DI82 140 aa9.49□□□□□ -0.89
SYNE2-214ENST00000554928 ECI1P42126 302 aa9.49□□□□□ -0.89
SYNE2-214ENST00000554928 CCR6P51684 374 aa9.49□□□□□ -0.89
SYNE2-214ENST00000554928 EXOSC2Q13868 293 aaKnown RBP9.49□□□□□ -0.89
SYNE2-214ENST00000554928 ZNF343Q6P1L6 599 aa9.49□□□□□ -0.89
SYNE2-214ENST00000554928 H2BFWTQ7Z2G1 175 aa9.49□□□□□ -0.89
SYNE2-214ENST00000554928 SELENOHQ8IZQ5 122 aaKnown RBP9.49□□□□□ -0.89
SYNE2-214ENST00000554928 CADM3Q8N126 398 aa9.49□□□□□ -0.89
SYNE2-214ENST00000554928 OR1L8Q8NGR8 309 aa9.49□□□□□ -0.89
SYNE2-214ENST00000554928 DPF1Q92782 380 aa9.49□□□□□ -0.89
SYNE2-214ENST00000554928 TMEM222Q9H0R3 208 aa9.49□□□□□ -0.89
SYNE2-214ENST00000554928 FBXL7Q9UJT9 491 aa9.49□□□□□ -0.89
SYNE2-214ENST00000554928 PRNDQ9UKY0 176 aa9.49□□□□□ -0.89
SYNE2-214ENST00000554928 MFSD2BA6NFX1 497 aa9.48□□□□□ -0.89
SYNE2-214ENST00000554928 SNAPC5O75971 98 aa9.48□□□□□ -0.89
SYNE2-214ENST00000554928 CDS2O95674 445 aa9.48□□□□□ -0.89
SYNE2-214ENST00000554928 FGF2P09038 288 aa9.48□□□□□ -0.89
SYNE2-214ENST00000554928 OR8U8P0C7N1 319 aa9.48□□□□□ -0.89
SYNE2-214ENST00000554928 OR13C7P0DN81 318 aa9.48□□□□□ -0.89
SYNE2-214ENST00000554928 IL7P13232 177 aa9.48□□□□□ -0.89
SYNE2-214ENST00000554928 AKR1C4P17516 323 aa9.48□□□□□ -0.89
SYNE2-214ENST00000554928 BTCP35070 178 aa9.48□□□□□ -0.89
SYNE2-214ENST00000554928 ATP5G2Q06055 141 aa9.48□□□□□ -0.89
SYNE2-214ENST00000554928 TMEM187Q14656 261 aa9.48□□□□□ -0.89
SYNE2-214ENST00000554928 KLK9Q2XQG4 91 aa9.48□□□□□ -0.89
SYNE2-214ENST00000554928 C15orf32Q32M92 178 aa9.48□□□□□ -0.89
SYNE2-214ENST00000554928 C11orf87Q6NUJ2 197 aa9.48□□□□□ -0.89
SYNE2-214ENST00000554928 SLC25A42Q86VD7 318 aa9.48□□□□□ -0.89
SYNE2-214ENST00000554928 CCDC140Q96MF4 163 aa9.48□□□□□ -0.89
SYNE2-214ENST00000554928 AURKAIP1Q9NWT8 199 aaPredicted RBP9.48□□□□□ -0.89
SYNE2-214ENST00000554928 KLK9Q9UKQ9 250 aa9.48□□□□□ -0.89
SYNE2-214ENST00000554928 IGHV3-21A0A0B4J1V1 117 aa9.47□□□□□ -0.89
SYNE2-214ENST00000554928 A0A0G2JLM5 398 aa9.47□□□□□ -0.89
SYNE2-214ENST00000554928 FAM223BA6NKX1 122 aa9.47□□□□□ -0.89
SYNE2-214ENST00000554928 SEC14L6B5MCN3 397 aa9.47□□□□□ -0.89
SYNE2-214ENST00000554928 PPP5D1E7EU14 171 aa9.47□□□□□ -0.89
SYNE2-214ENST00000554928 BMPR1BO00238 502 aa9.47□□□□□ -0.89
SYNE2-214ENST00000554928 HLA-AP01891 365 aaKnown RBP9.47□□□□□ -0.89
SYNE2-214ENST00000554928 FAUP35544 74 aaKnown RBP9.47□□□□□ -0.89
SYNE2-214ENST00000554928 AKR1C2P52895 323 aa9.47□□□□□ -0.89
SYNE2-214ENST00000554928 AP3S2P59780 193 aa9.47□□□□□ -0.89
SYNE2-214ENST00000554928 LINC01559Q495D7 138 aa9.47□□□□□ -0.89
SYNE2-214ENST00000554928 TMEM268Q5VZI3 342 aa9.47□□□□□ -0.89
SYNE2-214ENST00000554928 TRIQKQ629K1 86 aa9.47□□□□□ -0.89
SYNE2-214ENST00000554928 TMED4Q7Z7H5 227 aa9.47□□□□□ -0.89
SYNE2-214ENST00000554928 HAPLN4Q86UW8 402 aa9.47□□□□□ -0.89
SYNE2-214ENST00000554928 FAM223AQ8IWN6 122 aa9.47□□□□□ -0.89
SYNE2-214ENST00000554928 NECAP1Q8NC96 275 aa9.47□□□□□ -0.89
SYNE2-214ENST00000554928 OR4A16Q8NH70 328 aa9.47□□□□□ -0.89
SYNE2-214ENST00000554928 GPR146Q96CH1 333 aa9.47□□□□□ -0.89
SYNE2-214ENST00000554928 USMG5Q96IX5 58 aa9.47□□□□□ -0.89
SYNE2-214ENST00000554928 PEF1Q9UBV8 284 aaKnown RBP9.47□□□□□ -0.89
SYNE2-214ENST00000554928 FLVCR2Q9UPI3 526 aa9.47□□□□□ -0.89
SYNE2-214ENST00000554928 DNAH9Q9NYC9 4486 aa9.46□□□□□ -0.89
SYNE2-214ENST00000554928 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.46□□□□□ -0.9
SYNE2-214ENST00000554928 OVOL1O14753 267 aa9.46□□□□□ -0.9
SYNE2-214ENST00000554928 PLA2G10O15496 165 aa9.46□□□□□ -0.9
SYNE2-214ENST00000554928 ST8SIA3O43173 380 aa9.46□□□□□ -0.9
SYNE2-214ENST00000554928 EDN2P20800 178 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms