RNA–Protein interactions for RNA: ENST00000554901.1

SPTLC2-203, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 1 (best)

Gene SPTLC2, Length 1,518 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-203ENST00000554901 WIPF2Q8TF74 440 aaPredicted RBP12.92□□□□□ -0.34
SPTLC2-203ENST00000554901 FYTTD1Q96QD9 318 aaKnown RBP12.92□□□□□ -0.34
SPTLC2-203ENST00000554901 ALG5Q9Y673 324 aa12.92□□□□□ -0.34
SPTLC2-203ENST00000554901 A0A1B0GW64 132 aa12.91□□□□□ -0.34
SPTLC2-203ENST00000554901 PSMB11A5LHX3 300 aa12.91□□□□□ -0.34
SPTLC2-203ENST00000554901 CGB1A6NKQ9 187 aa12.91□□□□□ -0.34
SPTLC2-203ENST00000554901 E7EUB6 86 aa12.91□□□□□ -0.34
SPTLC2-203ENST00000554901 SSNA1O43805 119 aa12.91□□□□□ -0.34
SPTLC2-203ENST00000554901 BRI3O95415 125 aa12.91□□□□□ -0.34
SPTLC2-203ENST00000554901 PPIFP30405 207 aaKnown RBP12.91□□□□□ -0.34
SPTLC2-203ENST00000554901 ECSCRQ19T08 205 aa12.91□□□□□ -0.34
SPTLC2-203ENST00000554901 AWAT1Q58HT5 328 aa12.91□□□□□ -0.34
SPTLC2-203ENST00000554901 KLHDC1Q8N7A1 406 aa12.91□□□□□ -0.34
SPTLC2-203ENST00000554901 OR1S1Q8NH92 325 aa12.91□□□□□ -0.34
SPTLC2-203ENST00000554901 HSPB7Q9UBY9 170 aa12.91□□□□□ -0.34
SPTLC2-203ENST00000554901 WSB1Q9Y6I7 421 aa12.91□□□□□ -0.34
SPTLC2-203ENST00000554901 IGLC7A0M8Q6 106 aa12.9□□□□□ -0.34
SPTLC2-203ENST00000554901 NPIPB5A8MRT5 1133 aa12.9□□□□□ -0.34
SPTLC2-203ENST00000554901 G3V318 75 aa12.9□□□□□ -0.34
SPTLC2-203ENST00000554901 H3BUA1 57 aa12.9□□□□□ -0.34
SPTLC2-203ENST00000554901 IGHG4P01861 327 aa12.9□□□□□ -0.34
SPTLC2-203ENST00000554901 OPN1MWP04001 364 aa12.9□□□□□ -0.34
SPTLC2-203ENST00000554901 OPN1MW2P0DN77 364 aa12.9□□□□□ -0.34
SPTLC2-203ENST00000554901 OPN1MW3P0DN78 364 aa12.9□□□□□ -0.34
SPTLC2-203ENST00000554901 MYOD1P15172 320 aa12.9□□□□□ -0.34
SPTLC2-203ENST00000554901 TNFRSF9Q07011 255 aa12.9□□□□□ -0.34
SPTLC2-203ENST00000554901 IAH1Q2TAA2 248 aaPredicted RBP12.9□□□□□ -0.34
SPTLC2-203ENST00000554901 ASPHD1Q5U4P2 390 aa12.9□□□□□ -0.34
SPTLC2-203ENST00000554901 TEX38Q6PEX7 206 aa12.9□□□□□ -0.34
SPTLC2-203ENST00000554901 TTC9CQ8N5M4 171 aa12.9□□□□□ -0.34
SPTLC2-203ENST00000554901 FAM110DQ8TAY7 271 aaPredicted RBP12.9□□□□□ -0.34
SPTLC2-203ENST00000554901 LINC00527Q9UJ94 153 aa12.9□□□□□ -0.34
SPTLC2-203ENST00000554901 FBN1P35555 2871 aaKnown RBP12.9□□□□□ -0.34
SPTLC2-203ENST00000554901 COL6A5A8TX70 2615 aa12.89□□□□□ -0.35
SPTLC2-203ENST00000554901 IGLV1-40P01703 118 aa12.89□□□□□ -0.35
SPTLC2-203ENST00000554901 CRYGCP07315 174 aa12.89□□□□□ -0.35
SPTLC2-203ENST00000554901 ELANEP08246 267 aa12.89□□□□□ -0.35
SPTLC2-203ENST00000554901 GSG1LQ6UXU4 331 aa12.89□□□□□ -0.35
SPTLC2-203ENST00000554901 HINT2Q9BX68 163 aa12.89□□□□□ -0.35
SPTLC2-203ENST00000554901 PLEKHA3Q9HB20 300 aa12.89□□□□□ -0.35
SPTLC2-203ENST00000554901 HMX3A6NHT5 357 aa12.88□□□□□ -0.35
SPTLC2-203ENST00000554901 MPTX1A8MV57 137 aa12.88□□□□□ -0.35
SPTLC2-203ENST00000554901 MED6O75586 246 aa12.88□□□□□ -0.35
SPTLC2-203ENST00000554901 LY86O95711 162 aa12.88□□□□□ -0.35
SPTLC2-203ENST00000554901 PSMB6P28072 239 aa12.88□□□□□ -0.35
SPTLC2-203ENST00000554901 FOXE3Q13461 319 aa12.88□□□□□ -0.35
SPTLC2-203ENST00000554901 RNF152Q8N8N0 203 aa12.88□□□□□ -0.35
SPTLC2-203ENST00000554901 OR5AU1Q8NGC0 362 aa12.88□□□□□ -0.35
SPTLC2-203ENST00000554901 OR4X2Q8NGF9 303 aa12.88□□□□□ -0.35
SPTLC2-203ENST00000554901 OR4D5Q8NGN0 318 aa12.88□□□□□ -0.35
SPTLC2-203ENST00000554901 WFDC12Q8WWY7 111 aa12.88□□□□□ -0.35
SPTLC2-203ENST00000554901 OR10C1Q96KK4 312 aa12.88□□□□□ -0.35
SPTLC2-203ENST00000554901 C2orf50Q96LR7 162 aa12.88□□□□□ -0.35
SPTLC2-203ENST00000554901 ENY2Q9NPA8 101 aa12.88□□□□□ -0.35
SPTLC2-203ENST00000554901 C5orf51A6NDU8 294 aa12.88□□□□□ -0.35
SPTLC2-203ENST00000554901 CCSO14618 274 aa12.88□□□□□ -0.35
SPTLC2-203ENST00000554901 CYB5BO43169 146 aa12.88□□□□□ -0.35
SPTLC2-203ENST00000554901 CTRB1P17538 263 aa12.88□□□□□ -0.35
SPTLC2-203ENST00000554901 ERHP84090 104 aaKnown RBP12.88□□□□□ -0.35
SPTLC2-203ENST00000554901 ID3Q02535 119 aa12.88□□□□□ -0.35
SPTLC2-203ENST00000554901 WT1-ASQ06250 92 aa12.88□□□□□ -0.35
SPTLC2-203ENST00000554901 KLK9Q2XQG4 91 aa12.88□□□□□ -0.35
SPTLC2-203ENST00000554901 CTRB2Q6GPI1 263 aa12.88□□□□□ -0.35
SPTLC2-203ENST00000554901 ZNF329Q86UD4 541 aa12.88□□□□□ -0.35
SPTLC2-203ENST00000554901 ZBTB8BQ8NAP8 495 aaPredicted RBP12.88□□□□□ -0.35
SPTLC2-203ENST00000554901 OR10W1Q8NGF6 305 aa12.88□□□□□ -0.35
SPTLC2-203ENST00000554901 OR1L6Q8NGR2 347 aa12.88□□□□□ -0.35
SPTLC2-203ENST00000554901 SLA2Q9H6Q3 261 aa12.88□□□□□ -0.35
SPTLC2-203ENST00000554901 KLK9Q9UKQ9 250 aa12.88□□□□□ -0.35
SPTLC2-203ENST00000554901 C13orf42A0A1B0GVH6 325 aa12.87□□□□□ -0.35
SPTLC2-203ENST00000554901 FAM25EA8MYX2 175 aa12.87□□□□□ -0.35
SPTLC2-203ENST00000554901 HAX1O00165 279 aa12.87□□□□□ -0.35
SPTLC2-203ENST00000554901 FBXO24O75426 580 aa12.87□□□□□ -0.35
SPTLC2-203ENST00000554901 OR13C7P0DN81 318 aa12.87□□□□□ -0.35
SPTLC2-203ENST00000554901 AREGP15514 252 aa12.87□□□□□ -0.35
SPTLC2-203ENST00000554901 PSMB8P28062 276 aa12.87□□□□□ -0.35
SPTLC2-203ENST00000554901 NKX2-1P43699 371 aaPredicted RBP12.87□□□□□ -0.35
SPTLC2-203ENST00000554901 HOXA1P49639 335 aaPredicted RBP12.87□□□□□ -0.35
SPTLC2-203ENST00000554901 CYCSP99999 105 aaKnown RBP12.87□□□□□ -0.35
SPTLC2-203ENST00000554901 OR2C3Q8N628 320 aa12.87□□□□□ -0.35
SPTLC2-203ENST00000554901 ZNF114Q8NC26 417 aa12.87□□□□□ -0.35
SPTLC2-203ENST00000554901 MED28Q9H204 178 aa12.87□□□□□ -0.35
SPTLC2-203ENST00000554901 CEBPZOSA8MTT3 80 aa12.86□□□□□ -0.35
SPTLC2-203ENST00000554901 GOSR2O14653 212 aa12.86□□□□□ -0.35
SPTLC2-203ENST00000554901 SOX15O60248 233 aa12.86□□□□□ -0.35
SPTLC2-203ENST00000554901 C2orf68Q2NKX9 166 aa12.86□□□□□ -0.35
SPTLC2-203ENST00000554901 CXorf66Q5JRM2 361 aaPredicted RBP12.86□□□□□ -0.35
SPTLC2-203ENST00000554901 OR5T1Q8NG75 326 aa12.86□□□□□ -0.35
SPTLC2-203ENST00000554901 CIB3Q96Q77 187 aaPredicted RBP12.86□□□□□ -0.35
SPTLC2-203ENST00000554901 HIPK2Q9H2X6 1198 aa12.86□□□□□ -0.35
SPTLC2-203ENST00000554901 ZFP57Q9NU63 452 aa12.86□□□□□ -0.35
SPTLC2-203ENST00000554901 GSKIPQ9P0R6 139 aa12.86□□□□□ -0.35
SPTLC2-203ENST00000554901 APELAP0DMC3 54 aa12.85□□□□□ -0.35
SPTLC2-203ENST00000554901 HIST1H1BP16401 226 aaKnown RBP12.85□□□□□ -0.35
SPTLC2-203ENST00000554901 ATP5IP56385 69 aaPredicted RBP12.85□□□□□ -0.35
SPTLC2-203ENST00000554901 TMEM65Q6PI78 240 aa12.85□□□□□ -0.35
SPTLC2-203ENST00000554901 DTD1Q8TEA8 209 aa12.85□□□□□ -0.35
SPTLC2-203ENST00000554901 NMES1Q9C002 83 aa12.85□□□□□ -0.35
SPTLC2-203ENST00000554901 MGAT4CQ9UBM8 478 aa12.85□□□□□ -0.35
SPTLC2-203ENST00000554901 F11RQ9Y624 299 aaKnown RBP12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms