RNA–Protein interactions for RNA: ENST00000554785.1

PRPF39-208, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 2,121 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-208ENST00000554785 TAS2R1Q9NYW7 299 aa0.86□□□□□ -2.27
PRPF39-208ENST00000554785 GLTPQ9NZD2 209 aa0.86□□□□□ -2.27
PRPF39-208ENST00000554785 RABL2AQ9UBK7 228 aaPredicted RBP0.86□□□□□ -2.27
PRPF39-208ENST00000554785 ENOPH1Q9UHY7 261 aa0.86□□□□□ -2.27
PRPF39-208ENST00000554785 SLC35A3Q9Y2D2 325 aa0.86□□□□□ -2.27
PRPF39-208ENST00000554785 SNX24Q9Y343 169 aa0.86□□□□□ -2.27
PRPF39-208ENST00000554785 KPTNQ9Y664 436 aa0.86□□□□□ -2.27
PRPF39-208ENST00000554785 VPS13BQ7Z7G8 4022 aa0.85□□□□□ -2.27
PRPF39-208ENST00000554785 IGKV1D-42A0A075B6H8 117 aa0.85□□□□□ -2.27
PRPF39-208ENST00000554785 TRAV27A0A087WT01 109 aa0.85□□□□□ -2.27
PRPF39-208ENST00000554785 TRAV38-1A0A0B4J264 116 aa0.85□□□□□ -2.27
PRPF39-208ENST00000554785 IGHV3OR16-9A0A0B4J2B5 98 aa0.85□□□□□ -2.27
PRPF39-208ENST00000554785 IZUMO1RA6ND01 250 aa0.85□□□□□ -2.27
PRPF39-208ENST00000554785 NDUFC2-KCTD14E9PQ53 114 aa0.85□□□□□ -2.27
PRPF39-208ENST00000554785 RPL36A-HNRNPH2H7BZ11 118 aa0.85□□□□□ -2.27
PRPF39-208ENST00000554785 HMGN4O00479 90 aa0.85□□□□□ -2.27
PRPF39-208ENST00000554785 BHLHE40O14503 412 aa0.85□□□□□ -2.27
PRPF39-208ENST00000554785 OVOL1O14753 267 aa0.85□□□□□ -2.27
PRPF39-208ENST00000554785 XRCC2O43543 280 aa0.85□□□□□ -2.27
PRPF39-208ENST00000554785 SGCEO43556 437 aa0.85□□□□□ -2.27
PRPF39-208ENST00000554785 KLHL2O95198 593 aa0.85□□□□□ -2.27
PRPF39-208ENST00000554785 CD74P04233 296 aa0.85□□□□□ -2.27
PRPF39-208ENST00000554785 IL4P05112 153 aa0.85□□□□□ -2.27
PRPF39-208ENST00000554785 GLAP06280 429 aa0.85□□□□□ -2.27
PRPF39-208ENST00000554785 MMP7P09237 267 aaPredicted RBP0.85□□□□□ -2.27
PRPF39-208ENST00000554785 TFPTP0C1Z6 253 aa0.85□□□□□ -2.27
PRPF39-208ENST00000554785 APELAP0DMC3 54 aa0.85□□□□□ -2.27
PRPF39-208ENST00000554785 TCP1P17987 556 aaKnown RBP0.85□□□□□ -2.27
PRPF39-208ENST00000554785 RAB5AP20339 215 aa0.85□□□□□ -2.27
PRPF39-208ENST00000554785 PRPS1L1P21108 318 aa0.85□□□□□ -2.27
PRPF39-208ENST00000554785 RPS4Y1P22090 263 aaKnown RBP0.85□□□□□ -2.27
PRPF39-208ENST00000554785 MYL9P24844 172 aa0.85□□□□□ -2.27
PRPF39-208ENST00000554785 HTR1DP28221 377 aa0.85□□□□□ -2.27
PRPF39-208ENST00000554785 GGT2P36268 569 aa0.85□□□□□ -2.27
PRPF39-208ENST00000554785 CDKN2CP42773 168 aa0.85□□□□□ -2.27
PRPF39-208ENST00000554785 OR1E2P47887 323 aa0.85□□□□□ -2.27
PRPF39-208ENST00000554785 REG1BP48304 166 aa0.85□□□□□ -2.27
PRPF39-208ENST00000554785 TGM4P49221 684 aa0.85□□□□□ -2.27
PRPF39-208ENST00000554785 GNG10P50151 68 aa0.85□□□□□ -2.27
PRPF39-208ENST00000554785 UBE2E1P51965 193 aa0.85□□□□□ -2.27
PRPF39-208ENST00000554785 RPL31P62899 125 aaKnown RBP0.85□□□□□ -2.27
PRPF39-208ENST00000554785 CACNG7P62955 275 aa0.85□□□□□ -2.27
PRPF39-208ENST00000554785 PSPHP78330 225 aa0.85□□□□□ -2.27
PRPF39-208ENST00000554785 PITPNAQ00169 270 aa0.85□□□□□ -2.27
PRPF39-208ENST00000554785 ZNF816Q0VGE8 651 aaPredicted RBP0.85□□□□□ -2.27
PRPF39-208ENST00000554785 DIAPH2-AS1Q14236 149 aa0.85□□□□□ -2.27
PRPF39-208ENST00000554785 ZNF141Q15928 474 aa0.85□□□□□ -2.27
PRPF39-208ENST00000554785 MOGQ16653 247 aa0.85□□□□□ -2.27
PRPF39-208ENST00000554785 ZNF678Q5SXM1 525 aa0.85□□□□□ -2.27
PRPF39-208ENST00000554785 PLCXD3Q63HM9 321 aa0.85□□□□□ -2.27
PRPF39-208ENST00000554785 SLC36A1Q7Z2H8 476 aa0.85□□□□□ -2.27
PRPF39-208ENST00000554785 MRPL21Q7Z2W9 205 aaKnown RBP0.85□□□□□ -2.27
PRPF39-208ENST00000554785 NEGR1Q7Z3B1 354 aa0.85□□□□□ -2.27
PRPF39-208ENST00000554785 LYG2Q86SG7 212 aa0.85□□□□□ -2.27
PRPF39-208ENST00000554785 TRAPPC6BQ86SZ2 158 aa0.85□□□□□ -2.27
PRPF39-208ENST00000554785 LINC00596Q86U02 117 aa0.85□□□□□ -2.27
PRPF39-208ENST00000554785 C10orf107Q8IVU9 208 aa0.85□□□□□ -2.27
PRPF39-208ENST00000554785 SGPP2Q8IWX5 399 aa0.85□□□□□ -2.27
PRPF39-208ENST00000554785 LRRC34Q8IZ02 419 aa0.85□□□□□ -2.27
PRPF39-208ENST00000554785 OSR2Q8N2R0 312 aa0.85□□□□□ -2.27
PRPF39-208ENST00000554785 TMEM256Q8N2U0 113 aa0.85□□□□□ -2.27
PRPF39-208ENST00000554785 ZNF676Q8N7Q3 588 aa0.85□□□□□ -2.27
PRPF39-208ENST00000554785 UBAC2Q8NBM4 344 aa0.85□□□□□ -2.27
PRPF39-208ENST00000554785 OR8G5Q8NG78 346 aa0.85□□□□□ -2.27
PRPF39-208ENST00000554785 OR10W1Q8NGF6 305 aa0.85□□□□□ -2.27
PRPF39-208ENST00000554785 OR11L1Q8NGX0 322 aa0.85□□□□□ -2.27
PRPF39-208ENST00000554785 OR52P1PQ8NH57 321 aa0.85□□□□□ -2.27
PRPF39-208ENST00000554785 PFN4Q8NHR9 129 aa0.85□□□□□ -2.27
PRPF39-208ENST00000554785 GLYATL2Q8WU03 294 aa0.85□□□□□ -2.27
PRPF39-208ENST00000554785 DCAKDQ8WVC6 231 aa0.85□□□□□ -2.27
PRPF39-208ENST00000554785 C10orf82Q8WW14 230 aa0.85□□□□□ -2.27
PRPF39-208ENST00000554785 SLC25A46Q96AG3 418 aa0.85□□□□□ -2.27
PRPF39-208ENST00000554785 UQCC2Q9BRT2 126 aa0.85□□□□□ -2.27
PRPF39-208ENST00000554785 TMEM243Q9BU79 118 aa0.85□□□□□ -2.27
PRPF39-208ENST00000554785 SAMD10Q9BYL1 202 aa0.85□□□□□ -2.27
PRPF39-208ENST00000554785 OR2H1Q9GZK4 316 aa0.85□□□□□ -2.27
PRPF39-208ENST00000554785 CHST6Q9GZX3 395 aa0.85□□□□□ -2.27
PRPF39-208ENST00000554785 SLC38A1Q9H2H9 487 aa0.85□□□□□ -2.27
PRPF39-208ENST00000554785 NCOR1P1Q9H4R4 102 aa0.85□□□□□ -2.27
PRPF39-208ENST00000554785 POPDC3Q9HBV1 291 aa0.85□□□□□ -2.27
PRPF39-208ENST00000554785 EXOSC4Q9NPD3 245 aaKnown RBP0.85□□□□□ -2.27
PRPF39-208ENST00000554785 RRAGDQ9NQL2 400 aaPredicted RBP0.85□□□□□ -2.27
PRPF39-208ENST00000554785 C8orf17Q9NRJ1 99 aa0.85□□□□□ -2.27
PRPF39-208ENST00000554785 MCUBQ9NWR8 336 aa0.85□□□□□ -2.27
PRPF39-208ENST00000554785 TMEM216Q9P0N5 145 aa0.85□□□□□ -2.27
PRPF39-208ENST00000554785 LRP1Q07954 4544 aaKnown RBP0.85□□□□□ -2.27
PRPF39-208ENST00000554785 FAT1Q14517 4588 aa0.85□□□□□ -2.27
PRPF39-208ENST00000554785 SPRR5A0A1B0GTR4 108 aa0.85□□□□□ -2.27
PRPF39-208ENST00000554785 A0A1B0GWA3 101 aa0.85□□□□□ -2.27
PRPF39-208ENST00000554785 A0A1W2PRG6 482 aa0.85□□□□□ -2.27
PRPF39-208ENST00000554785 GGT3PA6NGU5 568 aa0.85□□□□□ -2.27
PRPF39-208ENST00000554785 A6NIN4 97 aa0.85□□□□□ -2.27
PRPF39-208ENST00000554785 ZNF850A8MQ14 1090 aa0.85□□□□□ -2.27
PRPF39-208ENST00000554785 ANKRD65E5RJM6 399 aa0.85□□□□□ -2.27
PRPF39-208ENST00000554785 G3V318 75 aa0.85□□□□□ -2.27
PRPF39-208ENST00000554785 PGRMC1O00264 195 aaKnown RBP0.85□□□□□ -2.27
PRPF39-208ENST00000554785 TNFRSF11BO00300 401 aa0.85□□□□□ -2.27
PRPF39-208ENST00000554785 TAAR5O14804 337 aa0.85□□□□□ -2.27
PRPF39-208ENST00000554785 ZNF189O75820 626 aaPredicted RBP0.85□□□□□ -2.27
PRPF39-208ENST00000554785 OXTP01178 125 aa0.85□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms