RNA–Protein interactions for RNA: ENST00000554659.5

VTI1B-204, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VTI1B, Length 5,351 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-204ENST00000554659 SAPCD1Q5SSQ6 148 aa11.8□□□□□ -0.52
VTI1B-204ENST00000554659 MBD3L1Q8WWY6 194 aa11.8□□□□□ -0.52
VTI1B-204ENST00000554659 IMMP2LQ96T52 175 aa11.8□□□□□ -0.52
VTI1B-204ENST00000554659 PAPPA-AS1Q5QFB9 102 aa11.8□□□□□ -0.52
VTI1B-204ENST00000554659 SPCS1Q9Y6A9 102 aa11.8□□□□□ -0.52
VTI1B-204ENST00000554659 REPIN1Q9BWE0 567 aaKnown RBP11.8□□□□□ -0.52
VTI1B-204ENST00000554659 PSMB11A5LHX3 300 aa11.8□□□□□ -0.52
VTI1B-204ENST00000554659 TYMSP04818 313 aa11.8□□□□□ -0.52
VTI1B-204ENST00000554659 NEUROG1Q92886 237 aa11.8□□□□□ -0.52
VTI1B-204ENST00000554659 EPOPA6NHQ4 379 aa11.79□□□□□ -0.52
VTI1B-204ENST00000554659 SLC17A3O00476 420 aa11.79□□□□□ -0.52
VTI1B-204ENST00000554659 RFPL3SP0C7P2 107 aa11.79□□□□□ -0.52
VTI1B-204ENST00000554659 FGF11Q92914 225 aa11.79□□□□□ -0.52
VTI1B-204ENST00000554659 C17orf98A8MV24 154 aa11.79□□□□□ -0.52
VTI1B-204ENST00000554659 NPIPB11E5RHQ5 1161 aa11.79□□□□□ -0.52
VTI1B-204ENST00000554659 CGAP01215 116 aa11.79□□□□□ -0.52
VTI1B-204ENST00000554659 CCL1P22362 96 aa11.79□□□□□ -0.52
VTI1B-204ENST00000554659 TAF1LQ8IZX4 1826 aa11.79□□□□□ -0.52
VTI1B-204ENST00000554659 IGHV3-35A0A0C4DH35 117 aa11.78□□□□□ -0.52
VTI1B-204ENST00000554659 CA1P00915 261 aaPredicted RBP11.78□□□□□ -0.52
VTI1B-204ENST00000554659 SFTPCP11686 197 aa11.78□□□□□ -0.52
VTI1B-204ENST00000554659 STPG1Q5TH74 334 aa11.78□□□□□ -0.52
VTI1B-204ENST00000554659 DERL1Q9BUN8 251 aa11.78□□□□□ -0.52
VTI1B-204ENST00000554659 CLDN16Q9Y5I7 305 aa11.78□□□□□ -0.52
VTI1B-204ENST00000554659 SCN10AQ9Y5Y9 1956 aa11.78□□□□□ -0.52
VTI1B-204ENST00000554659 SCO2A0A1W2PP80 73 aa11.78□□□□□ -0.52
VTI1B-204ENST00000554659 FOXI3A8MTJ6 420 aaPredicted RBP11.78□□□□□ -0.52
VTI1B-204ENST00000554659 TM4SF5O14894 197 aa11.78□□□□□ -0.52
VTI1B-204ENST00000554659 TGFAP01135 160 aa11.78□□□□□ -0.52
VTI1B-204ENST00000554659 TBR1Q16650 682 aa11.78□□□□□ -0.52
VTI1B-204ENST00000554659 ZNRF1Q8ND25 227 aa11.78□□□□□ -0.52
VTI1B-204ENST00000554659 LINC00587B1AMM8 73 aa11.78□□□□□ -0.52
VTI1B-204ENST00000554659 PROB1E7EW31 1015 aa11.78□□□□□ -0.52
VTI1B-204ENST00000554659 MOSP00540 346 aa11.78□□□□□ -0.52
VTI1B-204ENST00000554659 GAS1P54826 345 aa11.78□□□□□ -0.52
VTI1B-204ENST00000554659 RSPO4Q2I0M5 234 aaPredicted RBP11.78□□□□□ -0.52
VTI1B-204ENST00000554659 GLRXP35754 106 aa11.78□□□□□ -0.52
VTI1B-204ENST00000554659 ICAM4Q14773 271 aa11.78□□□□□ -0.52
VTI1B-204ENST00000554659 PRELID3AQ96N28 172 aa11.78□□□□□ -0.52
VTI1B-204ENST00000554659 FOXC2Q99958 501 aa11.78□□□□□ -0.52
VTI1B-204ENST00000554659 TRBV6-7A0A0A0MS04 114 aa11.78□□□□□ -0.52
VTI1B-204ENST00000554659 APOMO95445 188 aa11.78□□□□□ -0.52
VTI1B-204ENST00000554659 APOHP02749 345 aaPredicted RBP11.78□□□□□ -0.52
VTI1B-204ENST00000554659 IGFBP2P18065 325 aa11.78□□□□□ -0.52
VTI1B-204ENST00000554659 PEAR1Q5VY43 1037 aaPredicted RBP11.78□□□□□ -0.52
VTI1B-204ENST00000554659 RAX2Q96IS3 184 aa11.78□□□□□ -0.52
VTI1B-204ENST00000554659 C19orf67A6NJJ6 358 aa11.77□□□□□ -0.52
VTI1B-204ENST00000554659 IGLV3-19P01714 112 aa11.77□□□□□ -0.52
VTI1B-204ENST00000554659 NBEAP1P0C6P0 100 aa11.77□□□□□ -0.52
VTI1B-204ENST00000554659 ATP5G3P48201 142 aa11.77□□□□□ -0.52
VTI1B-204ENST00000554659 FAM89BQ8N5H3 189 aa11.77□□□□□ -0.52
VTI1B-204ENST00000554659 PEX7O00628 323 aa11.77□□□□□ -0.53
VTI1B-204ENST00000554659 ALKBH7Q9BT30 221 aaPredicted RBP11.77□□□□□ -0.53
VTI1B-204ENST00000554659 RNF115Q9Y4L5 304 aa11.77□□□□□ -0.53
VTI1B-204ENST00000554659 RPL23P62829 140 aaKnown RBP11.77□□□□□ -0.53
VTI1B-204ENST00000554659 TMEM95Q3KNT9 176 aa11.77□□□□□ -0.53
VTI1B-204ENST00000554659 LRTM2Q8N967 370 aa11.77□□□□□ -0.53
VTI1B-204ENST00000554659 C1orf162Q8NEQ5 155 aaPredicted RBP11.77□□□□□ -0.53
VTI1B-204ENST00000554659 RALGAPA2Q2PPJ7 1873 aa11.77□□□□□ -0.53
VTI1B-204ENST00000554659 PRR32B1ATL7 298 aa11.77□□□□□ -0.53
VTI1B-204ENST00000554659 C9orf172C9J069 976 aa11.77□□□□□ -0.53
VTI1B-204ENST00000554659 CACNG7P62955 275 aa11.77□□□□□ -0.53
VTI1B-204ENST00000554659 PLAURQ03405 335 aa11.77□□□□□ -0.53
VTI1B-204ENST00000554659 FAM19A2Q8N3H0 131 aa11.77□□□□□ -0.53
VTI1B-204ENST00000554659 TRAV24A0A0B4J272 114 aa11.76□□□□□ -0.53
VTI1B-204ENST00000554659 IGHV1-69-2A0A0G2JMI3 117 aa11.76□□□□□ -0.53
VTI1B-204ENST00000554659 H0YIZ8 118 aa11.76□□□□□ -0.53
VTI1B-204ENST00000554659 TNFSF10P50591 281 aa11.76□□□□□ -0.53
VTI1B-204ENST00000554659 TIMM23BQ5SRD1 257 aa11.76□□□□□ -0.53
VTI1B-204ENST00000554659 FAM90A1Q86YD7 464 aa11.76□□□□□ -0.53
VTI1B-204ENST00000554659 OR13A1Q8NGR1 328 aa11.76□□□□□ -0.53
VTI1B-204ENST00000554659 GFI1Q99684 422 aa11.76□□□□□ -0.53
VTI1B-204ENST00000554659 CACNA1DQ01668 2161 aa11.76□□□□□ -0.53
VTI1B-204ENST00000554659 SPTBP11277 2137 aa11.76□□□□□ -0.53
VTI1B-204ENST00000554659 SRSF3P84103 164 aaKnown RBP11.76□□□□□ -0.53
VTI1B-204ENST00000554659 FAM106AQ4KMX7 169 aa11.76□□□□□ -0.53
VTI1B-204ENST00000554659 FAM159AQ6UWV7 190 aa11.76□□□□□ -0.53
VTI1B-204ENST00000554659 TMEM170AQ8WVE7 144 aa11.76□□□□□ -0.53
VTI1B-204ENST00000554659 MRPS18CQ9Y3D5 142 aaKnown RBP11.76□□□□□ -0.53
VTI1B-204ENST00000554659 SIPA1L1O43166 1804 aa11.76□□□□□ -0.53
VTI1B-204ENST00000554659 C9JCJ5 164 aa11.76□□□□□ -0.53
VTI1B-204ENST00000554659 ATP5G2Q06055 141 aa11.76□□□□□ -0.53
VTI1B-204ENST00000554659 SAMD13Q5VXD3 122 aa11.76□□□□□ -0.53
VTI1B-204ENST00000554659 CLEC2AQ6UVW9 174 aa11.76□□□□□ -0.53
VTI1B-204ENST00000554659 CACNG8Q8WXS5 425 aa11.76□□□□□ -0.53
VTI1B-204ENST00000554659 PRDM13Q9H4Q3 707 aa11.76□□□□□ -0.53
VTI1B-204ENST00000554659 IGHV3OR16-13A0A075B7E8 117 aa11.76□□□□□ -0.53
VTI1B-204ENST00000554659 IGHV3-74A0A0B4J1X5 117 aa11.76□□□□□ -0.53
VTI1B-204ENST00000554659 FMC1Q96HJ9 113 aa11.76□□□□□ -0.53
VTI1B-204ENST00000554659 ELOVL5Q9NYP7 299 aa11.76□□□□□ -0.53
VTI1B-204ENST00000554659 AKAP6Q13023 2319 aa11.75□□□□□ -0.53
VTI1B-204ENST00000554659 A0A1B0GW15 77 aa11.75□□□□□ -0.53
VTI1B-204ENST00000554659 GTF3AQ92664 365 aaKnown RBP11.75□□□□□ -0.53
VTI1B-204ENST00000554659 PIKFYVEQ9Y2I7 2098 aa11.75□□□□□ -0.53
VTI1B-204ENST00000554659 MUC21A0A0G2JKD1 596 aa11.75□□□□□ -0.53
VTI1B-204ENST00000554659 MUC21A0A140T8X8 626 aa11.75□□□□□ -0.53
VTI1B-204ENST00000554659 IGKV3-20P01619 116 aa11.75□□□□□ -0.53
VTI1B-204ENST00000554659 NPPCP23582 126 aa11.75□□□□□ -0.53
VTI1B-204ENST00000554659 ACSF3Q4G176 576 aaPredicted RBP11.75□□□□□ -0.53
VTI1B-204ENST00000554659 MUC21Q5SSG8 566 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms