RNA–Protein interactions for RNA: ENST00000554429.5

PRPF39-206, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 2,977 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-206ENST00000554429 SETD2Q9BYW2 2564 aaPredicted RBP2.21□□□□□ -2.06
PRPF39-206ENST00000554429 CUBNO60494 3623 aa2.21□□□□□ -2.06
PRPF39-206ENST00000554429 FAM240AA0A1B0GVK7 77 aa2.21□□□□□ -2.06
PRPF39-206ENST00000554429 UBE2QL1A1L167 161 aa2.21□□□□□ -2.06
PRPF39-206ENST00000554429 MEIS3P1A6NDR6 274 aa2.21□□□□□ -2.06
PRPF39-206ENST00000554429 GAGE12JA6NER3 117 aa2.21□□□□□ -2.06
PRPF39-206ENST00000554429 VWC2LB2RUY7 222 aa2.21□□□□□ -2.06
PRPF39-206ENST00000554429 C9JAW5 83 aa2.21□□□□□ -2.06
PRPF39-206ENST00000554429 H7C417 338 aa2.21□□□□□ -2.06
PRPF39-206ENST00000554429 GAGE7O76087 117 aa2.21□□□□□ -2.06
PRPF39-206ENST00000554429 YIF1AO95070 293 aa2.21□□□□□ -2.06
PRPF39-206ENST00000554429 NDUFB8O95169 186 aa2.21□□□□□ -2.06
PRPF39-206ENST00000554429 SIX6O95475 246 aa2.21□□□□□ -2.06
PRPF39-206ENST00000554429 SLC2A10O95528 541 aa2.21□□□□□ -2.06
PRPF39-206ENST00000554429 CFDP00746 253 aaPredicted RBP2.21□□□□□ -2.06
PRPF39-206ENST00000554429 GYPBP06028 91 aa2.21□□□□□ -2.06
PRPF39-206ENST00000554429 GAGE12FP0CL80 117 aa2.21□□□□□ -2.06
PRPF39-206ENST00000554429 GAGE12GP0CL81 117 aa2.21□□□□□ -2.06
PRPF39-206ENST00000554429 GAGE12IP0CL82 117 aa2.21□□□□□ -2.06
PRPF39-206ENST00000554429 SLC25A16P16260 332 aa2.21□□□□□ -2.06
PRPF39-206ENST00000554429 GPR6P46095 362 aaPredicted RBP2.21□□□□□ -2.06
PRPF39-206ENST00000554429 CRYBA2P53672 197 aa2.21□□□□□ -2.06
PRPF39-206ENST00000554429 RPS13P62277 151 aaKnown RBP2.21□□□□□ -2.06
PRPF39-206ENST00000554429 PSG7Q13046 419 aa2.21□□□□□ -2.06
PRPF39-206ENST00000554429 GAGE4Q13068 117 aa2.21□□□□□ -2.06
PRPF39-206ENST00000554429 GINS1Q14691 196 aa2.21□□□□□ -2.06
PRPF39-206ENST00000554429 MESTQ5EB52 335 aa2.21□□□□□ -2.06
PRPF39-206ENST00000554429 OLFML2AQ68BL7 652 aa2.21□□□□□ -2.06
PRPF39-206ENST00000554429 SFRP4Q6FHJ7 346 aaPredicted RBP2.21□□□□□ -2.06
PRPF39-206ENST00000554429 C11orf71Q6IPW1 123 aa2.21□□□□□ -2.06
PRPF39-206ENST00000554429 SLC48A1Q6P1K1 146 aa2.21□□□□□ -2.06
PRPF39-206ENST00000554429 GTF2H5Q6ZYL4 71 aa2.21□□□□□ -2.06
PRPF39-206ENST00000554429 TCTE3Q8IZS6 198 aa2.21□□□□□ -2.06
PRPF39-206ENST00000554429 EXOC3-AS1Q8N2X6 119 aa2.21□□□□□ -2.06
PRPF39-206ENST00000554429 PACRGLQ8N7B6 248 aa2.21□□□□□ -2.06
PRPF39-206ENST00000554429 OR2M3Q8NG83 312 aa2.21□□□□□ -2.06
PRPF39-206ENST00000554429 OR51A4Q8NGJ6 313 aa2.21□□□□□ -2.06
PRPF39-206ENST00000554429 OR5P3Q8WZ94 311 aa2.21□□□□□ -2.06
PRPF39-206ENST00000554429 GPR146Q96CH1 333 aa2.21□□□□□ -2.06
PRPF39-206ENST00000554429 SPACA5Q96QH8 159 aa2.21□□□□□ -2.06
PRPF39-206ENST00000554429 NRIP2Q9BQI9 281 aa2.21□□□□□ -2.06
PRPF39-206ENST00000554429 RTBDNQ9BSG5 229 aaPredicted RBP2.21□□□□□ -2.06
PRPF39-206ENST00000554429 ZNF436Q9C0F3 470 aaPredicted RBP2.21□□□□□ -2.06
PRPF39-206ENST00000554429 EDA2RQ9HAV5 297 aa2.21□□□□□ -2.06
PRPF39-206ENST00000554429 TMEM100Q9NV29 134 aa2.21□□□□□ -2.06
PRPF39-206ENST00000554429 HIGD1AQ9Y241 93 aa2.21□□□□□ -2.06
PRPF39-206ENST00000554429 FLNAP21333 2647 aaKnown RBP2.21□□□□□ -2.06
PRPF39-206ENST00000554429 NAV3Q8IVL0 2385 aa2.21□□□□□ -2.06
PRPF39-206ENST00000554429 POLQO75417 2590 aa2.2□□□□□ -2.06
PRPF39-206ENST00000554429 CSMD2Q7Z408 3487 aa2.2□□□□□ -2.06
PRPF39-206ENST00000554429 A0A087WUU8 490 aa2.2□□□□□ -2.06
PRPF39-206ENST00000554429 A0A1W2PQD3 144 aa2.2□□□□□ -2.06
PRPF39-206ENST00000554429 B4DXG7 233 aa2.2□□□□□ -2.06
PRPF39-206ENST00000554429 EEF1E1-BLOC1S5C9J1V9 151 aa2.2□□□□□ -2.06
PRPF39-206ENST00000554429 INAFM1C9JVW0 142 aa2.2□□□□□ -2.06
PRPF39-206ENST00000554429 TMEM178BH3BS89 294 aa2.2□□□□□ -2.06
PRPF39-206ENST00000554429 AIPO00170 330 aa2.2□□□□□ -2.06
PRPF39-206ENST00000554429 EEF1E1O43324 174 aaKnown RBP2.2□□□□□ -2.06
PRPF39-206ENST00000554429 HOXA3O43365 443 aaPredicted RBP2.2□□□□□ -2.06
PRPF39-206ENST00000554429 CXCL13O43927 109 aa2.2□□□□□ -2.06
PRPF39-206ENST00000554429 GCM2O75603 506 aaPredicted RBP2.2□□□□□ -2.06
PRPF39-206ENST00000554429 NUDT14O95848 222 aa2.2□□□□□ -2.06
PRPF39-206ENST00000554429 LALBAP00709 142 aa2.2□□□□□ -2.06
PRPF39-206ENST00000554429 NRASP01111 189 aa2.2□□□□□ -2.06
PRPF39-206ENST00000554429 IGHG4P01861 327 aa2.2□□□□□ -2.06
PRPF39-206ENST00000554429 MAS1P04201 325 aa2.2□□□□□ -2.06
PRPF39-206ENST00000554429 CTSDP07339 412 aaPredicted RBP2.2□□□□□ -2.06
PRPF39-206ENST00000554429 H2BFMP0C1H6 154 aa2.2□□□□□ -2.06
PRPF39-206ENST00000554429 OR5G3P0C626 314 aa2.2□□□□□ -2.06
PRPF39-206ENST00000554429 OR12D1P0DN82 309 aa2.2□□□□□ -2.06
PRPF39-206ENST00000554429 EDNRAP25101 427 aa2.2□□□□□ -2.06
PRPF39-206ENST00000554429 APOC4P55056 127 aa2.2□□□□□ -2.06
PRPF39-206ENST00000554429 FBXW4P57775 412 aa2.2□□□□□ -2.06
PRPF39-206ENST00000554429 ZNF154Q13106 437 aa2.2□□□□□ -2.06
PRPF39-206ENST00000554429 PRDX4Q13162 271 aa2.2□□□□□ -2.06
PRPF39-206ENST00000554429 RGNQ15493 299 aa2.2□□□□□ -2.06
PRPF39-206ENST00000554429 ZNF672Q499Z4 452 aaPredicted RBP2.2□□□□□ -2.06
PRPF39-206ENST00000554429 LRRC10Q5BKY1 277 aa2.2□□□□□ -2.06
PRPF39-206ENST00000554429 C1orf194Q5T5A4 169 aa2.2□□□□□ -2.06
PRPF39-206ENST00000554429 ALKAL2Q6UX46 152 aa2.2□□□□□ -2.06
PRPF39-206ENST00000554429 IL34Q6ZMJ4 242 aa2.2□□□□□ -2.06
PRPF39-206ENST00000554429 FER1L6-AS1Q8NA97 138 aa2.2□□□□□ -2.06
PRPF39-206ENST00000554429 C5orf17Q8NAS9 161 aa2.2□□□□□ -2.06
PRPF39-206ENST00000554429 SLC7A6Q92536 515 aa2.2□□□□□ -2.06
PRPF39-206ENST00000554429 TBX15Q96SF7 602 aa2.2□□□□□ -2.06
PRPF39-206ENST00000554429 HSD17B10Q99714 261 aaKnown RBP2.2□□□□□ -2.06
PRPF39-206ENST00000554429 GINS4Q9BRT9 223 aa2.2□□□□□ -2.06
PRPF39-206ENST00000554429 TSSK6Q9BXA6 273 aa2.2□□□□□ -2.06
PRPF39-206ENST00000554429 OR52D1Q9H346 318 aa2.2□□□□□ -2.06
PRPF39-206ENST00000554429 DUSP21Q9H596 190 aa2.2□□□□□ -2.06
PRPF39-206ENST00000554429 C3orf14Q9HBI5 128 aa2.2□□□□□ -2.06
PRPF39-206ENST00000554429 TAF9BQ9HBM6 251 aa2.2□□□□□ -2.06
PRPF39-206ENST00000554429 ZNF331Q9NQX6 463 aaPredicted RBP2.2□□□□□ -2.06
PRPF39-206ENST00000554429 SPANXA1Q9NS26 97 aa2.2□□□□□ -2.06
PRPF39-206ENST00000554429 RPL36Q9Y3U8 105 aaKnown RBP2.2□□□□□ -2.06
PRPF39-206ENST00000554429 CHST2Q9Y4C5 530 aa2.2□□□□□ -2.06
PRPF39-206ENST00000554429 OR51B2Q9Y5P1 312 aa2.2□□□□□ -2.06
PRPF39-206ENST00000554429 COX11Q9Y6N1 276 aa2.2□□□□□ -2.06
PRPF39-206ENST00000554429 CCDC168Q8NDH2 2452 aa2.2□□□□□ -2.06
PRPF39-206ENST00000554429 DUXBA0A1W2PPF3 345 aa2.2□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms