RNA–Protein interactions for RNA: ENST00000554308.5

PPP4R3A-201, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 5

Gene PPP4R3A, Length 2,515 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-201ENST00000554308 ACACBO00763 2458 aa12.06□□□□□ -0.48
PPP4R3A-201ENST00000554308 BRWD1-AS2P59051 145 aa12.06□□□□□ -0.48
PPP4R3A-201ENST00000554308 GNB1P62873 340 aa12.06□□□□□ -0.48
PPP4R3A-201ENST00000554308 LBHQ53QV2 105 aaPredicted RBP12.06□□□□□ -0.48
PPP4R3A-201ENST00000554308 STUMQ69YW2 141 aa12.06□□□□□ -0.48
PPP4R3A-201ENST00000554308 DYNLRB1Q9NP97 96 aa12.06□□□□□ -0.48
PPP4R3A-201ENST00000554308 TRAV38-1A0A0B4J264 116 aa12.06□□□□□ -0.48
PPP4R3A-201ENST00000554308 A0A0U1RQK1 487 aa12.06□□□□□ -0.48
PPP4R3A-201ENST00000554308 ZNF320A2RRD8 509 aa12.06□□□□□ -0.48
PPP4R3A-201ENST00000554308 LRRC30A6NM36 301 aa12.06□□□□□ -0.48
PPP4R3A-201ENST00000554308 C17orf98A8MV24 154 aa12.06□□□□□ -0.48
PPP4R3A-201ENST00000554308 CNN1P51911 297 aaKnown RBP12.06□□□□□ -0.48
PPP4R3A-201ENST00000554308 FAM222BQ8WU58 562 aa12.06□□□□□ -0.48
PPP4R3A-201ENST00000554308 RNASE6Q93091 150 aaKnown RBP12.06□□□□□ -0.48
PPP4R3A-201ENST00000554308 ANAPC16Q96DE5 110 aa12.06□□□□□ -0.48
PPP4R3A-201ENST00000554308 TMEM204Q9BSN7 226 aa12.06□□□□□ -0.48
PPP4R3A-201ENST00000554308 FAM234AQ9H0X4 552 aa12.06□□□□□ -0.48
PPP4R3A-201ENST00000554308 POLR3KQ9Y2Y1 108 aaPredicted RBP12.06□□□□□ -0.48
PPP4R3A-201ENST00000554308 CLDN14O95500 239 aa12.05□□□□□ -0.48
PPP4R3A-201ENST00000554308 CD3EP07766 207 aa12.05□□□□□ -0.48
PPP4R3A-201ENST00000554308 ADH4P08319 380 aa12.05□□□□□ -0.48
PPP4R3A-201ENST00000554308 HNF1AP20823 631 aa12.05□□□□□ -0.48
PPP4R3A-201ENST00000554308 ZNF134P52741 427 aa12.05□□□□□ -0.48
PPP4R3A-201ENST00000554308 RPL15P61313 204 aaKnown RBP12.05□□□□□ -0.48
PPP4R3A-201ENST00000554308 HTD2P86397 168 aa12.05□□□□□ -0.48
PPP4R3A-201ENST00000554308 MORN2Q502X0 79 aa12.05□□□□□ -0.48
PPP4R3A-201ENST00000554308 LINC01551Q86U37 167 aa12.05□□□□□ -0.48
PPP4R3A-201ENST00000554308 GAFA1Q96PS6 74 aa12.05□□□□□ -0.48
PPP4R3A-201ENST00000554308 MANBALQ9NQG1 85 aa12.05□□□□□ -0.48
PPP4R3A-201ENST00000554308 FKBP11Q9NYL4 201 aa12.05□□□□□ -0.48
PPP4R3A-201ENST00000554308 SVEP1Q4LDE5 3571 aa12.05□□□□□ -0.48
PPP4R3A-201ENST00000554308 LINC00473A8K010 186 aa12.05□□□□□ -0.48
PPP4R3A-201ENST00000554308 NDUFB4O95168 129 aa12.05□□□□□ -0.48
PPP4R3A-201ENST00000554308 TYMSP04818 313 aa12.05□□□□□ -0.48
PPP4R3A-201ENST00000554308 SRP14P37108 136 aaKnown RBP12.05□□□□□ -0.48
PPP4R3A-201ENST00000554308 ADORA2A-AS1P86434 159 aa12.05□□□□□ -0.48
PPP4R3A-201ENST00000554308 ACOT6Q3I5F7 207 aaPredicted RBP12.05□□□□□ -0.48
PPP4R3A-201ENST00000554308 SSX8Q7RTT4 187 aa12.05□□□□□ -0.48
PPP4R3A-201ENST00000554308 Q8TCH9 128 aa12.05□□□□□ -0.48
PPP4R3A-201ENST00000554308 SDSLQ96GA7 329 aa12.05□□□□□ -0.48
PPP4R3A-201ENST00000554308 CALYQ9NYX4 217 aa12.05□□□□□ -0.48
PPP4R3A-201ENST00000554308 HIVEP3Q5T1R4 2406 aa12.05□□□□□ -0.48
PPP4R3A-201ENST00000554308 RNF212BA8MTL3 300 aa12.04□□□□□ -0.48
PPP4R3A-201ENST00000554308 P0C879 139 aa12.04□□□□□ -0.48
PPP4R3A-201ENST00000554308 IQCJQ1A5X6 159 aa12.04□□□□□ -0.48
PPP4R3A-201ENST00000554308 CST9LP1Q5W188 147 aa12.04□□□□□ -0.48
PPP4R3A-201ENST00000554308 TRAT1Q6PIZ9 186 aa12.04□□□□□ -0.48
PPP4R3A-201ENST00000554308 OR10P1Q8NGE3 313 aa12.04□□□□□ -0.48
PPP4R3A-201ENST00000554308 DTD1Q8TEA8 209 aa12.04□□□□□ -0.48
PPP4R3A-201ENST00000554308 TRAPPC1Q9Y5R8 145 aa12.04□□□□□ -0.48
PPP4R3A-201ENST00000554308 PIGBOS1A0A0B4J2F0 54 aa12.04□□□□□ -0.48
PPP4R3A-201ENST00000554308 GRIFINA4D1Z8 144 aa12.04□□□□□ -0.48
PPP4R3A-201ENST00000554308 FAM90A26D6RGX4 464 aa12.04□□□□□ -0.48
PPP4R3A-201ENST00000554308 RBFOX2O43251 390 aaKnown RBP eCLIP12.04□□□□□ -0.48
PPP4R3A-201ENST00000554308 LOXL3P58215 753 aa12.04□□□□□ -0.48
PPP4R3A-201ENST00000554308 ZNF788Q6ZQV5 615 aa12.04□□□□□ -0.48
PPP4R3A-201ENST00000554308 DIRC2Q96SL1 478 aa12.04□□□□□ -0.48
PPP4R3A-201ENST00000554308 TRGV10A0A0A0MS01 117 aa12.03□□□□□ -0.48
PPP4R3A-201ENST00000554308 RBMXL2O75526 392 aaKnown RBP12.03□□□□□ -0.48
PPP4R3A-201ENST00000554308 GPR12P47775 334 aa12.03□□□□□ -0.48
PPP4R3A-201ENST00000554308 Q8N7P7 452 aa12.03□□□□□ -0.48
PPP4R3A-201ENST00000554308 YLPM1P49750 1951 aaKnown RBP12.03□□□□□ -0.48
PPP4R3A-201ENST00000554308 PROP1O75360 226 aa12.03□□□□□ -0.48
PPP4R3A-201ENST00000554308 APOBEC3AP31941 199 aaPredicted RBP12.03□□□□□ -0.48
PPP4R3A-201ENST00000554308 CDC34P49427 236 aaPredicted RBP12.03□□□□□ -0.48
PPP4R3A-201ENST00000554308 RAB4BP61018 213 aa12.03□□□□□ -0.48
PPP4R3A-201ENST00000554308 CATR1Q13166 79 aa12.03□□□□□ -0.48
PPP4R3A-201ENST00000554308 C17orf58Q2M2W7 97 aa12.03□□□□□ -0.48
PPP4R3A-201ENST00000554308 TDRG1Q3Y452 100 aa12.03□□□□□ -0.48
PPP4R3A-201ENST00000554308 RPL39P5Q59GN2 51 aa12.03□□□□□ -0.48
PPP4R3A-201ENST00000554308 KCNIP4Q6PIL6 250 aa12.03□□□□□ -0.48
PPP4R3A-201ENST00000554308 ZNF709Q8N972 641 aa12.03□□□□□ -0.48
PPP4R3A-201ENST00000554308 ZBTB34Q8NCN2 500 aa12.03□□□□□ -0.48
PPP4R3A-201ENST00000554308 TRBV20OR9-2A0A075B6H5 130 aa12.02□□□□□ -0.48
PPP4R3A-201ENST00000554308 TMEM144Q7Z5S9 345 aa12.02□□□□□ -0.48
PPP4R3A-201ENST00000554308 MS4A5Q9H3V2 200 aa12.02□□□□□ -0.48
PPP4R3A-201ENST00000554308 PATZ1Q9HBE1 687 aaKnown RBP12.02□□□□□ -0.48
PPP4R3A-201ENST00000554308 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.02□□□□□ -0.48
PPP4R3A-201ENST00000554308 NAGKQ9UJ70 344 aa12.02□□□□□ -0.48
PPP4R3A-201ENST00000554308 JPT1Q9UK76 154 aa12.02□□□□□ -0.48
PPP4R3A-201ENST00000554308 ARFGEF3Q5TH69 2177 aa12.02□□□□□ -0.49
PPP4R3A-201ENST00000554308 KBTBD11-OT1A0A1B0GTJ5 212 aa12.02□□□□□ -0.49
PPP4R3A-201ENST00000554308 SIAH2O43255 324 aa12.02□□□□□ -0.49
PPP4R3A-201ENST00000554308 VENTXO95231 258 aa12.02□□□□□ -0.49
PPP4R3A-201ENST00000554308 MBP02144 154 aa12.02□□□□□ -0.49
PPP4R3A-201ENST00000554308 EIF4EBP1Q13541 118 aaPredicted RBP12.02□□□□□ -0.49
PPP4R3A-201ENST00000554308 CR1LQ2VPA4 569 aa12.02□□□□□ -0.49
PPP4R3A-201ENST00000554308 TEX36Q5VZQ5 186 aa12.02□□□□□ -0.49
PPP4R3A-201ENST00000554308 SGMS2Q8NHU3 365 aa12.02□□□□□ -0.49
PPP4R3A-201ENST00000554308 IMMP2LQ96T52 175 aa12.02□□□□□ -0.49
PPP4R3A-201ENST00000554308 TMEM106BQ9NUM4 274 aa12.02□□□□□ -0.49
PPP4R3A-201ENST00000554308 IGSF10Q6WRI0 2623 aa12.02□□□□□ -0.49
PPP4R3A-201ENST00000554308 PPIAL4EA0A075B759 164 aa12.01□□□□□ -0.49
PPP4R3A-201ENST00000554308 PPIAL4DF5H284 164 aa12.01□□□□□ -0.49
PPP4R3A-201ENST00000554308 TMEM178BH3BS89 294 aa12.01□□□□□ -0.49
PPP4R3A-201ENST00000554308 PPIAL4FP0DN26 164 aa12.01□□□□□ -0.49
PPP4R3A-201ENST00000554308 ADMP35318 185 aa12.01□□□□□ -0.49
PPP4R3A-201ENST00000554308 RPL29P47914 159 aaKnown RBP12.01□□□□□ -0.49
PPP4R3A-201ENST00000554308 ERVFC1-1P60608 527 aa12.01□□□□□ -0.49
PPP4R3A-201ENST00000554308 MSMO1Q15800 293 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms