RNA–Protein interactions for RNA: ENST00000553882.1

ACTN1-211, Transcript of actinin alpha 1, humanhuman

TSL 2

Gene ACTN1, Length 2,636 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-211ENST00000553882 TMPRSS2O15393 492 aa11.94□□□□□ -0.5
ACTN1-211ENST00000553882 THBS3P49746 956 aa11.94□□□□□ -0.5
ACTN1-211ENST00000553882 DEFA6Q01524 100 aa11.94□□□□□ -0.5
ACTN1-211ENST00000553882 STUMQ69YW2 141 aa11.94□□□□□ -0.5
ACTN1-211ENST00000553882 UNQ6494/PRO21346Q6UXR6 183 aa11.94□□□□□ -0.5
ACTN1-211ENST00000553882 SGMS2Q8NHU3 365 aa11.94□□□□□ -0.5
ACTN1-211ENST00000553882 SFRP2Q96HF1 295 aa11.94□□□□□ -0.5
ACTN1-211ENST00000553882 GAFA1Q96PS6 74 aa11.94□□□□□ -0.5
ACTN1-211ENST00000553882 OR51B2Q9Y5P1 312 aa11.94□□□□□ -0.5
ACTN1-211ENST00000553882 CUL9Q8IWT3 2517 aa11.94□□□□□ -0.5
ACTN1-211ENST00000553882 F6UZH7 168 aa11.94□□□□□ -0.5
ACTN1-211ENST00000553882 SELENOVP59797 346 aa11.94□□□□□ -0.5
ACTN1-211ENST00000553882 OR4P4Q8NGL7 312 aa11.94□□□□□ -0.5
ACTN1-211ENST00000553882 FOXA2Q9Y261 457 aaPredicted RBP11.94□□□□□ -0.5
ACTN1-211ENST00000553882 A0A1B0GUS0 222 aa11.93□□□□□ -0.5
ACTN1-211ENST00000553882 GCHFRP30047 84 aa11.93□□□□□ -0.5
ACTN1-211ENST00000553882 RPL31P62899 125 aaKnown RBP11.93□□□□□ -0.5
ACTN1-211ENST00000553882 TMEM249Q2WGJ8 235 aa11.93□□□□□ -0.5
ACTN1-211ENST00000553882 C1orf185Q5T7R7 199 aa11.93□□□□□ -0.5
ACTN1-211ENST00000553882 LRFN3Q9BTN0 628 aa11.93□□□□□ -0.5
ACTN1-211ENST00000553882 ZNF318Q5VUA4 2279 aa11.93□□□□□ -0.5
ACTN1-211ENST00000553882 SRRM4A7MD48 611 aaKnown RBP11.93□□□□□ -0.5
ACTN1-211ENST00000553882 GZMBP10144 247 aa11.93□□□□□ -0.5
ACTN1-211ENST00000553882 NDUFB7P17568 137 aa11.93□□□□□ -0.5
ACTN1-211ENST00000553882 GATA2P23769 480 aaPredicted RBP11.93□□□□□ -0.5
ACTN1-211ENST00000553882 GATA4P43694 442 aa11.93□□□□□ -0.5
ACTN1-211ENST00000553882 CISD2Q8N5K1 135 aaKnown RBP11.93□□□□□ -0.5
ACTN1-211ENST00000553882 OCC1Q8TAD7 63 aa11.93□□□□□ -0.5
ACTN1-211ENST00000553882 FAM222BQ8WU58 562 aa11.93□□□□□ -0.5
ACTN1-211ENST00000553882 TP53TG5Q9Y2B4 290 aa11.93□□□□□ -0.5
ACTN1-211ENST00000553882 MDFIC2A0A1B0GVS7 189 aa11.92□□□□□ -0.5
ACTN1-211ENST00000553882 J3QR06 171 aa11.92□□□□□ -0.5
ACTN1-211ENST00000553882 ZNF439Q8NDP4 499 aa11.92□□□□□ -0.5
ACTN1-211ENST00000553882 IL19Q9UHD0 177 aa11.92□□□□□ -0.5
ACTN1-211ENST00000553882 PTPRZ1P23471 2315 aaPredicted RBP11.92□□□□□ -0.5
ACTN1-211ENST00000553882 TYMSP04818 313 aa11.92□□□□□ -0.5
ACTN1-211ENST00000553882 CD40P25942 277 aa11.92□□□□□ -0.5
ACTN1-211ENST00000553882 RHOBP62745 196 aa11.92□□□□□ -0.5
ACTN1-211ENST00000553882 FAM216AQ8WUB2 273 aa11.92□□□□□ -0.5
ACTN1-211ENST00000553882 PLEKHA3Q9HB20 300 aa11.92□□□□□ -0.5
ACTN1-211ENST00000553882 TRAPPC1Q9Y5R8 145 aa11.92□□□□□ -0.5
ACTN1-211ENST00000553882 ZNF705GA8MUZ8 300 aaPredicted RBP11.91□□□□□ -0.5
ACTN1-211ENST00000553882 NDUFS6O75380 124 aaKnown RBP11.91□□□□□ -0.5
ACTN1-211ENST00000553882 CT45A6P0DMU7 189 aa11.91□□□□□ -0.5
ACTN1-211ENST00000553882 CT45A5P0DMU8 189 aa11.91□□□□□ -0.5
ACTN1-211ENST00000553882 CT45A7P0DMV0 189 aa11.91□□□□□ -0.5
ACTN1-211ENST00000553882 GPX4P36969 197 aaPredicted RBP11.91□□□□□ -0.5
ACTN1-211ENST00000553882 JOSD1Q15040 202 aaPredicted RBP11.91□□□□□ -0.5
ACTN1-211ENST00000553882 MLANAQ16655 118 aa11.91□□□□□ -0.5
ACTN1-211ENST00000553882 COA6Q5JTJ3 125 aaKnown RBP11.91□□□□□ -0.5
ACTN1-211ENST00000553882 MIR17HGQ75NE6 70 aa11.91□□□□□ -0.5
ACTN1-211ENST00000553882 ACY3Q96HD9 319 aa11.91□□□□□ -0.5
ACTN1-211ENST00000553882 TPRP12270 2363 aaKnown RBP11.91□□□□□ -0.5
ACTN1-211ENST00000553882 NAV3Q8IVL0 2385 aa11.91□□□□□ -0.5
ACTN1-211ENST00000553882 APC2O95996 2303 aa11.91□□□□□ -0.5
ACTN1-211ENST00000553882 ITGB1BP1O14713 200 aa11.91□□□□□ -0.5
ACTN1-211ENST00000553882 CD99P14209 185 aa11.91□□□□□ -0.5
ACTN1-211ENST00000553882 CNN1P51911 297 aaKnown RBP11.91□□□□□ -0.5
ACTN1-211ENST00000553882 LCN2P80188 198 aa11.91□□□□□ -0.5
ACTN1-211ENST00000553882 RAB31Q13636 194 aa11.91□□□□□ -0.5
ACTN1-211ENST00000553882 ZNF788Q6ZQV5 615 aa11.91□□□□□ -0.5
ACTN1-211ENST00000553882 Q6ZS92 163 aa11.91□□□□□ -0.5
ACTN1-211ENST00000553882 TMEM144Q7Z5S9 345 aa11.91□□□□□ -0.5
ACTN1-211ENST00000553882 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.91□□□□□ -0.5
ACTN1-211ENST00000553882 SLC35D1Q9NTN3 355 aa11.91□□□□□ -0.5
ACTN1-211ENST00000553882 IGKV1OR2-108A0A075B7D4 117 aa11.9□□□□□ -0.5
ACTN1-211ENST00000553882 TSTD3H0UI37 97 aa11.9□□□□□ -0.5
ACTN1-211ENST00000553882 SLC17A3O00476 420 aa11.9□□□□□ -0.5
ACTN1-211ENST00000553882 SFTPCP11686 197 aa11.9□□□□□ -0.5
ACTN1-211ENST00000553882 CCKARP32238 428 aa11.9□□□□□ -0.5
ACTN1-211ENST00000553882 HLA-DRB5Q30154 266 aa11.9□□□□□ -0.5
ACTN1-211ENST00000553882 OR10W1Q8NGF6 305 aa11.9□□□□□ -0.5
ACTN1-211ENST00000553882 C14orf144Q96I85 54 aa11.9□□□□□ -0.5
ACTN1-211ENST00000553882 RAB9BQ9NP90 201 aa11.9□□□□□ -0.5
ACTN1-211ENST00000553882 SH3BGRL2Q9UJC5 107 aa11.9□□□□□ -0.5
ACTN1-211ENST00000553882 PLXNB1O43157 2135 aa11.9□□□□□ -0.5
ACTN1-211ENST00000553882 K7EN84 100 aa11.9□□□□□ -0.5
ACTN1-211ENST00000553882 DVL1O14640 695 aa11.9□□□□□ -0.5
ACTN1-211ENST00000553882 IRF2P14316 349 aa11.9□□□□□ -0.5
ACTN1-211ENST00000553882 TNFSF4P23510 183 aa11.9□□□□□ -0.5
ACTN1-211ENST00000553882 TIMP3P35625 211 aa11.9□□□□□ -0.5
ACTN1-211ENST00000553882 REG1BP48304 166 aa11.9□□□□□ -0.5
ACTN1-211ENST00000553882 RPL15P61313 204 aaKnown RBP11.9□□□□□ -0.5
ACTN1-211ENST00000553882 PKIAP61925 76 aa11.9□□□□□ -0.5
ACTN1-211ENST00000553882 TEX38Q6PEX7 206 aa11.9□□□□□ -0.5
ACTN1-211ENST00000553882 IGFL3Q6UXB1 125 aa11.9□□□□□ -0.5
ACTN1-211ENST00000553882 RBMXL3Q8N7X1 1067 aaKnown RBP11.9□□□□□ -0.5
ACTN1-211ENST00000553882 ELOVL5Q9NYP7 299 aa11.9□□□□□ -0.5
ACTN1-211ENST00000553882 A8MXE2 369 aa11.9□□□□□ -0.51
ACTN1-211ENST00000553882 DDTP30046 118 aa11.9□□□□□ -0.51
ACTN1-211ENST00000553882 RPL29P47914 159 aaKnown RBP11.9□□□□□ -0.51
ACTN1-211ENST00000553882 MRPL41Q8IXM3 137 aaKnown RBP11.9□□□□□ -0.51
ACTN1-211ENST00000553882 ADTRPQ96IZ2 230 aa11.9□□□□□ -0.51
ACTN1-211ENST00000553882 RPUSD1Q9UJJ7 312 aaKnown RBP11.9□□□□□ -0.51
ACTN1-211ENST00000553882 A0A087X0M5 115 aa11.89□□□□□ -0.51
ACTN1-211ENST00000553882 A0A1B0GX30 115 aa11.89□□□□□ -0.51
ACTN1-211ENST00000553882 GATCO43716 136 aaKnown RBP11.89□□□□□ -0.51
ACTN1-211ENST00000553882 CCL3L1P16619 93 aa11.89□□□□□ -0.51
ACTN1-211ENST00000553882 PDLIM4P50479 330 aa11.89□□□□□ -0.51
ACTN1-211ENST00000553882 PRR20EP86478 221 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms