RNA–Protein interactions for RNA: ENST00000553779.5

ACTN1-210, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 530 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-210ENST00000553779 CXorf58Q96LI9 332 aa7.46□□□□□ -1.22
ACTN1-210ENST00000553779 HYLS1Q96M11 299 aa7.46□□□□□ -1.22
ACTN1-210ENST00000553779 NDUFB11Q9NX14 153 aa7.46□□□□□ -1.22
ACTN1-210ENST00000553779 IGKV1D-8A0A087WSZ0 117 aa7.45□□□□□ -1.22
ACTN1-210ENST00000553779 TRBV7-1A0A0A6YYK4 115 aa7.45□□□□□ -1.22
ACTN1-210ENST00000553779 TEX22C9J3V5 150 aa7.45□□□□□ -1.22
ACTN1-210ENST00000553779 NDUFB8O95169 186 aa7.45□□□□□ -1.22
ACTN1-210ENST00000553779 HLA-DQB1P01920 261 aa7.45□□□□□ -1.22
ACTN1-210ENST00000553779 AREGP15514 252 aa7.45□□□□□ -1.22
ACTN1-210ENST00000553779 HLA-GP17693 338 aa7.45□□□□□ -1.22
ACTN1-210ENST00000553779 NAT1P18440 290 aa7.45□□□□□ -1.22
ACTN1-210ENST00000553779 PSMB6P28072 239 aa7.45□□□□□ -1.22
ACTN1-210ENST00000553779 GPR183P32249 361 aa7.45□□□□□ -1.22
ACTN1-210ENST00000553779 MECP2P51608 486 aaKnown RBP7.45□□□□□ -1.22
ACTN1-210ENST00000553779 APOC4P55056 127 aa7.45□□□□□ -1.22
ACTN1-210ENST00000553779 CATR1Q13166 79 aa7.45□□□□□ -1.22
ACTN1-210ENST00000553779 ZNF585BQ52M93 769 aa7.45□□□□□ -1.22
ACTN1-210ENST00000553779 CNIH2Q6PI25 160 aa7.45□□□□□ -1.22
ACTN1-210ENST00000553779 GPHB5Q86YW7 130 aa7.45□□□□□ -1.22
ACTN1-210ENST00000553779 DUSP18Q8NEJ0 188 aa7.45□□□□□ -1.22
ACTN1-210ENST00000553779 TMEM167AQ8TBQ9 72 aa7.45□□□□□ -1.22
ACTN1-210ENST00000553779 COMMD5Q9GZQ3 224 aa7.45□□□□□ -1.22
ACTN1-210ENST00000553779 SLC2A9Q9NRM0 540 aa7.45□□□□□ -1.22
ACTN1-210ENST00000553779 THYN1Q9P016 225 aa7.45□□□□□ -1.22
ACTN1-210ENST00000553779 ELF5Q9UKW6 265 aaPredicted RBP7.45□□□□□ -1.22
ACTN1-210ENST00000553779 UFC1Q9Y3C8 167 aa7.45□□□□□ -1.22
ACTN1-210ENST00000553779 HYDINQ4G0P3 5121 aa7.44□□□□□ -1.22
ACTN1-210ENST00000553779 IGKV1D-13A0A0B4J2D9 117 aa7.44□□□□□ -1.22
ACTN1-210ENST00000553779 IGHV3-35A0A0C4DH35 117 aa7.44□□□□□ -1.22
ACTN1-210ENST00000553779 TRDV1A0A1B0GX56 115 aa7.44□□□□□ -1.22
ACTN1-210ENST00000553779 LINC00862A6NCI5 91 aa7.44□□□□□ -1.22
ACTN1-210ENST00000553779 NUPR2A6NF83 97 aa7.44□□□□□ -1.22
ACTN1-210ENST00000553779 A8MWP6 167 aa7.44□□□□□ -1.22
ACTN1-210ENST00000553779 IL6RP08887 468 aaPredicted RBP7.44□□□□□ -1.22
ACTN1-210ENST00000553779 ZNF735P0CB33 412 aa7.44□□□□□ -1.22
ACTN1-210ENST00000553779 IGKV1-13P0DP09 117 aa7.44□□□□□ -1.22
ACTN1-210ENST00000553779 TNFSF8P32971 234 aa7.44□□□□□ -1.22
ACTN1-210ENST00000553779 FXYD4P59646 89 aa7.44□□□□□ -1.22
ACTN1-210ENST00000553779 ERVK-16P61578 105 aa7.44□□□□□ -1.22
ACTN1-210ENST00000553779 LSM3P62310 102 aaKnown RBP7.44□□□□□ -1.22
ACTN1-210ENST00000553779 RPL30P62888 115 aaKnown RBP7.44□□□□□ -1.22
ACTN1-210ENST00000553779 TM4SF20Q53R12 229 aa7.44□□□□□ -1.22
ACTN1-210ENST00000553779 PLET1Q6UQ28 207 aa7.44□□□□□ -1.22
ACTN1-210ENST00000553779 LINC00322Q6ZN03 302 aaPredicted RBP7.44□□□□□ -1.22
ACTN1-210ENST00000553779 ZNF66Q6ZN08 573 aa7.44□□□□□ -1.22
ACTN1-210ENST00000553779 DMBX1Q8NFW5 382 aa7.44□□□□□ -1.22
ACTN1-210ENST00000553779 OR4A5Q8NH83 315 aa7.44□□□□□ -1.22
ACTN1-210ENST00000553779 AP3S1Q92572 193 aa7.44□□□□□ -1.22
ACTN1-210ENST00000553779 MARC2Q969Z3 335 aa7.44□□□□□ -1.22
ACTN1-210ENST00000553779 CCDC140Q96MF4 163 aa7.44□□□□□ -1.22
ACTN1-210ENST00000553779 MLXQ9UH92 298 aa7.44□□□□□ -1.22
ACTN1-210ENST00000553779 ANXA10Q9UJ72 324 aa7.44□□□□□ -1.22
ACTN1-210ENST00000553779 A0A0J9YWU9 116 aa7.43□□□□□ -1.22
ACTN1-210ENST00000553779 TMEM213A2RRL7 107 aa7.43□□□□□ -1.22
ACTN1-210ENST00000553779 MFSD2BA6NFX1 497 aa7.43□□□□□ -1.22
ACTN1-210ENST00000553779 CLEC3BP05452 202 aa7.43□□□□□ -1.22
ACTN1-210ENST00000553779 MYOD1P15172 320 aa7.43□□□□□ -1.22
ACTN1-210ENST00000553779 CTRB1P17538 263 aa7.43□□□□□ -1.22
ACTN1-210ENST00000553779 FCGR2CP31995 323 aa7.43□□□□□ -1.22
ACTN1-210ENST00000553779 HERV-K104P61576 105 aa7.43□□□□□ -1.22
ACTN1-210ENST00000553779 DEFB135Q30KP9 77 aa7.43□□□□□ -1.22
ACTN1-210ENST00000553779 AADACL3Q5VUY0 350 aa7.43□□□□□ -1.22
ACTN1-210ENST00000553779 CTRB2Q6GPI1 263 aa7.43□□□□□ -1.22
ACTN1-210ENST00000553779 LAMTOR1Q6IAA8 161 aa7.43□□□□□ -1.22
ACTN1-210ENST00000553779 NRARPQ7Z6K4 114 aa7.43□□□□□ -1.22
ACTN1-210ENST00000553779 SPAG16Q8N0X2 631 aa7.43□□□□□ -1.22
ACTN1-210ENST00000553779 PUSL1Q8N0Z8 303 aaKnown RBP7.43□□□□□ -1.22
ACTN1-210ENST00000553779 OR2C3Q8N628 320 aa7.43□□□□□ -1.22
ACTN1-210ENST00000553779 TMEM217Q8N7C4 229 aa7.43□□□□□ -1.22
ACTN1-210ENST00000553779 LGALS14Q8TCE9 139 aa7.43□□□□□ -1.22
ACTN1-210ENST00000553779 LINC00476Q8WZB0 136 aa7.43□□□□□ -1.22
ACTN1-210ENST00000553779 HINT2Q9BX68 163 aa7.43□□□□□ -1.22
ACTN1-210ENST00000553779 SLC5A7Q9GZV3 580 aa7.43□□□□□ -1.22
ACTN1-210ENST00000553779 UBQLN2Q9UHD9 624 aa7.43□□□□□ -1.22
ACTN1-210ENST00000553779 KLK5Q9Y337 293 aaPredicted RBP7.43□□□□□ -1.22
ACTN1-210ENST00000553779 TRAV25A0A0B4J276 109 aa7.42□□□□□ -1.22
ACTN1-210ENST00000553779 SULT1C2O00338 296 aa7.42□□□□□ -1.22
ACTN1-210ENST00000553779 NQO2P16083 231 aa7.42□□□□□ -1.22
ACTN1-210ENST00000553779 C4BPBP20851 252 aa7.42□□□□□ -1.22
ACTN1-210ENST00000553779 NKX2-5P52952 324 aaPredicted RBP7.42□□□□□ -1.22
ACTN1-210ENST00000553779 FAM122CQ6P4D5 195 aa7.42□□□□□ -1.22
ACTN1-210ENST00000553779 TMEM17Q86X19 198 aa7.42□□□□□ -1.22
ACTN1-210ENST00000553779 SNX29P2Q8IUI4 249 aa7.42□□□□□ -1.22
ACTN1-210ENST00000553779 STPG3Q8N7X2 389 aa7.42□□□□□ -1.22
ACTN1-210ENST00000553779 UBAC2Q8NBM4 344 aa7.42□□□□□ -1.22
ACTN1-210ENST00000553779 BEST4Q8NFU0 473 aa7.42□□□□□ -1.22
ACTN1-210ENST00000553779 OR51H1Q8NH63 302 aa7.42□□□□□ -1.22
ACTN1-210ENST00000553779 DEDD2Q8WXF8 326 aa7.42□□□□□ -1.22
ACTN1-210ENST00000553779 GPHA2Q96T91 129 aa7.42□□□□□ -1.22
ACTN1-210ENST00000553779 SDHCQ99643 169 aaPredicted RBP7.42□□□□□ -1.22
ACTN1-210ENST00000553779 OVOL2Q9BRP0 275 aa7.42□□□□□ -1.22
ACTN1-210ENST00000553779 C20orf24Q9BUV8 137 aa7.42□□□□□ -1.22
ACTN1-210ENST00000553779 QTRT1Q9BXR0 403 aaKnown RBP7.42□□□□□ -1.22
ACTN1-210ENST00000553779 IFT46Q9NQC8 304 aa7.42□□□□□ -1.22
ACTN1-210ENST00000553779 CCL28Q9NRJ3 127 aa7.42□□□□□ -1.22
ACTN1-210ENST00000553779 BET1LQ9NYM9 111 aa7.42□□□□□ -1.22
ACTN1-210ENST00000553779 MRPL27Q9P0M9 148 aaKnown RBP7.42□□□□□ -1.22
ACTN1-210ENST00000553779 TBC1D24Q9ULP9 559 aa7.42□□□□□ -1.22
ACTN1-210ENST00000553779 SSR3Q9UNL2 185 aa7.42□□□□□ -1.22
ACTN1-210ENST00000553779 IGLV11-55A0A075B6I3 123 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms