RNA–Protein interactions for RNA: ENST00000553693.5

SCFD1-210, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-210ENST00000553693 MRPL2Q5T653 305 aaKnown RBP1.8□□□□□ -2.12
SCFD1-210ENST00000553693 DCUN1D2Q6PH85 259 aa1.8□□□□□ -2.12
SCFD1-210ENST00000553693 DRAM2Q6UX65 266 aa1.8□□□□□ -2.12
SCFD1-210ENST00000553693 MTERF4Q7Z6M4 381 aaKnown RBP1.8□□□□□ -2.12
SCFD1-210ENST00000553693 DAZ4Q86SG3 579 aaKnown RBP1.8□□□□□ -2.12
SCFD1-210ENST00000553693 SLC51BQ86UW2 128 aa1.8□□□□□ -2.12
SCFD1-210ENST00000553693 NT5DC3Q86UY8 548 aa1.8□□□□□ -2.12
SCFD1-210ENST00000553693 PHF13Q86YI8 300 aaPredicted RBP1.8□□□□□ -2.12
SCFD1-210ENST00000553693 SGPP2Q8IWX5 399 aa1.8□□□□□ -2.12
SCFD1-210ENST00000553693 CPNE9Q8IYJ1 553 aa1.8□□□□□ -2.12
SCFD1-210ENST00000553693 ZNF101Q8IZC7 436 aa1.8□□□□□ -2.12
SCFD1-210ENST00000553693 C2orf73Q8N5S3 287 aaPredicted RBP1.8□□□□□ -2.12
SCFD1-210ENST00000553693 NATD1Q8N6N6 113 aa1.8□□□□□ -2.12
SCFD1-210ENST00000553693 OR5K1Q8NHB7 308 aa1.8□□□□□ -2.12
SCFD1-210ENST00000553693 RNASE6Q93091 150 aaKnown RBP1.8□□□□□ -2.12
SCFD1-210ENST00000553693 PPP1R14BQ96C90 147 aa1.8□□□□□ -2.12
SCFD1-210ENST00000553693 EBNA1BP2Q99848 306 aaKnown RBP1.8□□□□□ -2.12
SCFD1-210ENST00000553693 DHRS9Q9BPW9 319 aa1.8□□□□□ -2.12
SCFD1-210ENST00000553693 MS4A8Q9BY19 250 aa1.8□□□□□ -2.12
SCFD1-210ENST00000553693 EIF5A2Q9GZV4 153 aaKnown RBP1.8□□□□□ -2.12
SCFD1-210ENST00000553693 FAM96AQ9H5X1 160 aa1.8□□□□□ -2.12
SCFD1-210ENST00000553693 DAZ1Q9NQZ3 744 aaKnown RBP1.8□□□□□ -2.12
SCFD1-210ENST00000553693 PLEKHJ1Q9NW61 149 aa1.8□□□□□ -2.12
SCFD1-210ENST00000553693 TMEM216Q9P0N5 145 aa1.8□□□□□ -2.12
SCFD1-210ENST00000553693 SEC16AO15027 2179 aa1.8□□□□□ -2.12
SCFD1-210ENST00000553693 SONP18583 2426 aaKnown RBP1.8□□□□□ -2.12
SCFD1-210ENST00000553693 A0A0G2JMM0 328 aa1.79□□□□□ -2.12
SCFD1-210ENST00000553693 A0A1B0GXF2 115 aa1.79□□□□□ -2.12
SCFD1-210ENST00000553693 A0A1W2PPB8 328 aa1.79□□□□□ -2.12
SCFD1-210ENST00000553693 A0A1W2PRS3 328 aa1.79□□□□□ -2.12
SCFD1-210ENST00000553693 ZNF98A6NK75 572 aa1.79□□□□□ -2.12
SCFD1-210ENST00000553693 KIR3DP1A8MWS1 328 aa1.79□□□□□ -2.12
SCFD1-210ENST00000553693 KCNK1O00180 336 aa1.79□□□□□ -2.12
SCFD1-210ENST00000553693 FGF16O43320 207 aa1.79□□□□□ -2.12
SCFD1-210ENST00000553693 TCF21O43680 179 aa1.79□□□□□ -2.12
SCFD1-210ENST00000553693 MFSD11O43934 449 aa1.79□□□□□ -2.12
SCFD1-210ENST00000553693 AHSA1O95433 338 aa1.79□□□□□ -2.12
SCFD1-210ENST00000553693 CALB1P05937 261 aa1.79□□□□□ -2.12
SCFD1-210ENST00000553693 FBP1P09467 338 aa1.79□□□□□ -2.12
SCFD1-210ENST00000553693 LINC00614P0C842 121 aa1.79□□□□□ -2.12
SCFD1-210ENST00000553693 PTHLHP12272 177 aa1.79□□□□□ -2.12
SCFD1-210ENST00000553693 UCHL3P15374 230 aa1.79□□□□□ -2.12
SCFD1-210ENST00000553693 NQO1P15559 274 aaKnown RBP1.79□□□□□ -2.12
SCFD1-210ENST00000553693 NTF3P20783 257 aa1.79□□□□□ -2.12
SCFD1-210ENST00000553693 GADD45AP24522 165 aa1.79□□□□□ -2.12
SCFD1-210ENST00000553693 AP2S1P53680 142 aaPredicted RBP1.79□□□□□ -2.12
SCFD1-210ENST00000553693 MP68P56378 58 aa1.79□□□□□ -2.12
SCFD1-210ENST00000553693 SMAGPQ0VAQ4 97 aa1.79□□□□□ -2.12
SCFD1-210ENST00000553693 SKP2Q13309 424 aa1.79□□□□□ -2.12
SCFD1-210ENST00000553693 TBC1D28Q2M2D7 210 aa1.79□□□□□ -2.12
SCFD1-210ENST00000553693 HLA-DRB5Q30154 266 aa1.79□□□□□ -2.12
SCFD1-210ENST00000553693 ZNF678Q5SXM1 525 aa1.79□□□□□ -2.12
SCFD1-210ENST00000553693 FAM104BQ5XKR9 115 aa1.79□□□□□ -2.12
SCFD1-210ENST00000553693 GLYATQ6IB77 296 aa1.79□□□□□ -2.12
SCFD1-210ENST00000553693 DNM1P34Q6PK57 102 aa1.79□□□□□ -2.12
SCFD1-210ENST00000553693 SCGB1D4Q6XE38 83 aa1.79□□□□□ -2.12
SCFD1-210ENST00000553693 TMEM144Q7Z5S9 345 aa1.79□□□□□ -2.12
SCFD1-210ENST00000553693 RPS19BP1Q86WX3 136 aaKnown RBP1.79□□□□□ -2.12
SCFD1-210ENST00000553693 FER1L6-AS1Q8NA97 138 aa1.79□□□□□ -2.12
SCFD1-210ENST00000553693 ZFP62Q8NB50 900 aaPredicted RBP1.79□□□□□ -2.12
SCFD1-210ENST00000553693 ZNF555Q8NEP9 628 aa1.79□□□□□ -2.12
SCFD1-210ENST00000553693 PIGXQ8TBF5 258 aa1.79□□□□□ -2.12
SCFD1-210ENST00000553693 C17orf50Q8WW18 174 aa1.79□□□□□ -2.12
SCFD1-210ENST00000553693 IMP4Q96G21 291 aaKnown RBP1.79□□□□□ -2.12
SCFD1-210ENST00000553693 CAPZA3Q96KX2 299 aa1.79□□□□□ -2.12
SCFD1-210ENST00000553693 KCTD7Q96MP8 289 aa1.79□□□□□ -2.12
SCFD1-210ENST00000553693 SELENOSQ9BQE4 189 aa1.79□□□□□ -2.12
SCFD1-210ENST00000553693 SEC22CQ9BRL7 303 aa1.79□□□□□ -2.12
SCFD1-210ENST00000553693 REG4Q9BYZ8 158 aa1.79□□□□□ -2.12
SCFD1-210ENST00000553693 ZNF436Q9C0F3 470 aaPredicted RBP1.79□□□□□ -2.12
SCFD1-210ENST00000553693 CHST5Q9GZS9 411 aa1.79□□□□□ -2.12
SCFD1-210ENST00000553693 ARL6Q9H0F7 186 aa1.79□□□□□ -2.12
SCFD1-210ENST00000553693 OR51E2Q9H255 320 aa1.79□□□□□ -2.12
SCFD1-210ENST00000553693 TRIM45Q9H8W5 580 aaPredicted RBP1.79□□□□□ -2.12
SCFD1-210ENST00000553693 LRTM1Q9HBL6 345 aa1.79□□□□□ -2.12
SCFD1-210ENST00000553693 SND1-IT1Q9HBX3 110 aa1.79□□□□□ -2.12
SCFD1-210ENST00000553693 KCNIP2Q9NS61 270 aa1.79□□□□□ -2.12
SCFD1-210ENST00000553693 RBM12B-AS1Q9P1G2 102 aa1.79□□□□□ -2.12
SCFD1-210ENST00000553693 NAGKQ9UJ70 344 aa1.79□□□□□ -2.12
SCFD1-210ENST00000553693 KMT2CQ8NEZ4 4911 aaKnown RBP1.78□□□□□ -2.12
SCFD1-210ENST00000553693 IGKV1-6A0A0C4DH72 117 aa1.78□□□□□ -2.12
SCFD1-210ENST00000553693 LOC285095A0A1B0GVY8 99 aa1.78□□□□□ -2.12
SCFD1-210ENST00000553693 IZUMO1RA6ND01 250 aa1.78□□□□□ -2.12
SCFD1-210ENST00000553693 DEFB108AA8MXU0 73 aa1.78□□□□□ -2.12
SCFD1-210ENST00000553693 F5H5P2 479 aa1.78□□□□□ -2.12
SCFD1-210ENST00000553693 H0YGG7 62 aa1.78□□□□□ -2.12
SCFD1-210ENST00000553693 M0R036 132 aa1.78□□□□□ -2.12
SCFD1-210ENST00000553693 CCL22O00626 93 aa1.78□□□□□ -2.12
SCFD1-210ENST00000553693 FFAR1O14842 300 aa1.78□□□□□ -2.12
SCFD1-210ENST00000553693 KCNK2O95069 426 aa1.78□□□□□ -2.12
SCFD1-210ENST00000553693 GPR75O95800 540 aa1.78□□□□□ -2.12
SCFD1-210ENST00000553693 IGKV1-39P01597 117 aa1.78□□□□□ -2.12
SCFD1-210ENST00000553693 HBZP02008 142 aa1.78□□□□□ -2.12
SCFD1-210ENST00000553693 IGKV1D-39P04432 117 aa1.78□□□□□ -2.12
SCFD1-210ENST00000553693 OR5AC1P0C628 307 aa1.78□□□□□ -2.12
SCFD1-210ENST00000553693 NEFHP12036 1026 aa1.78□□□□□ -2.12
SCFD1-210ENST00000553693 CD34P28906 385 aa1.78□□□□□ -2.12
SCFD1-210ENST00000553693 CRABP2P29373 138 aa1.78□□□□□ -2.12
SCFD1-210ENST00000553693 IFNGR2P38484 337 aa1.78□□□□□ -2.12
SCFD1-210ENST00000553693 CD79BP40259 229 aa1.78□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms