RNA–Protein interactions for RNA: ENST00000553544.1

SRP54-203, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 491 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-203ENST00000553544 THAP7Q9BT49 309 aaPredicted RBP8.94□□□□□ -0.98
SRP54-203ENST00000553544 RBM38Q9H0Z9 239 aaKnown RBP8.94□□□□□ -0.98
SRP54-203ENST00000553544 PLEKHA2Q9HB19 425 aa8.94□□□□□ -0.98
SRP54-203ENST00000553544 ZNF257Q9Y2Q1 563 aa8.94□□□□□ -0.98
SRP54-203ENST00000553544 DMRT1Q9Y5R6 373 aa8.94□□□□□ -0.98
SRP54-203ENST00000553544 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.93□□□□□ -0.98
SRP54-203ENST00000553544 GPR31O00270 319 aa8.93□□□□□ -0.98
SRP54-203ENST00000553544 PGLYRP1O75594 196 aaPredicted RBP8.93□□□□□ -0.98
SRP54-203ENST00000553544 FGF2P09038 288 aa8.93□□□□□ -0.98
SRP54-203ENST00000553544 MYOD1P15172 320 aa8.93□□□□□ -0.98
SRP54-203ENST00000553544 NQO2P16083 231 aa8.93□□□□□ -0.98
SRP54-203ENST00000553544 CTRB1P17538 263 aa8.93□□□□□ -0.98
SRP54-203ENST00000553544 HLA-GP17693 338 aa8.93□□□□□ -0.98
SRP54-203ENST00000553544 FAUP35544 74 aaKnown RBP8.93□□□□□ -0.98
SRP54-203ENST00000553544 UCP3P55916 312 aa8.93□□□□□ -0.98
SRP54-203ENST00000553544 SYNJ2BPP57105 145 aa8.93□□□□□ -0.98
SRP54-203ENST00000553544 ATP5G2Q06055 141 aa8.93□□□□□ -0.98
SRP54-203ENST00000553544 SPANXN2Q5MJ10 180 aa8.93□□□□□ -0.98
SRP54-203ENST00000553544 CTRB2Q6GPI1 263 aa8.93□□□□□ -0.98
SRP54-203ENST00000553544 OR51H1Q8NH63 302 aa8.93□□□□□ -0.98
SRP54-203ENST00000553544 OR52I2Q8NH67 350 aa8.93□□□□□ -0.98
SRP54-203ENST00000553544 DEDD2Q8WXF8 326 aa8.93□□□□□ -0.98
SRP54-203ENST00000553544 DGCR14Q96DF8 476 aaKnown RBP8.93□□□□□ -0.98
SRP54-203ENST00000553544 FANCD2OSQ96PS1 177 aa8.93□□□□□ -0.98
SRP54-203ENST00000553544 MIXL1Q9H2W2 232 aa8.93□□□□□ -0.98
SRP54-203ENST00000553544 SIGLEC8Q9NYZ4 499 aa8.93□□□□□ -0.98
SRP54-203ENST00000553544 FRAS1Q86XX4 4008 aa8.93□□□□□ -0.98
SRP54-203ENST00000553544 TRAV3A0A0B4J244 114 aa8.92□□□□□ -0.98
SRP54-203ENST00000553544 DISC1C4P0D8 188 aa8.92□□□□□ -0.98
SRP54-203ENST00000553544 BMPR1BO00238 502 aa8.92□□□□□ -0.98
SRP54-203ENST00000553544 UPK2O00526 184 aa8.92□□□□□ -0.98
SRP54-203ENST00000553544 OR2J3O76001 311 aa8.92□□□□□ -0.98
SRP54-203ENST00000553544 S1PR2O95136 353 aa8.92□□□□□ -0.98
SRP54-203ENST00000553544 RAB3DO95716 219 aa8.92□□□□□ -0.98
SRP54-203ENST00000553544 CSN3P07498 182 aa8.92□□□□□ -0.98
SRP54-203ENST00000553544 AKAIN1P0CW23 69 aa8.92□□□□□ -0.98
SRP54-203ENST00000553544 AREGP15514 252 aa8.92□□□□□ -0.98
SRP54-203ENST00000553544 F2RP25116 425 aa8.92□□□□□ -0.98
SRP54-203ENST00000553544 PSMB6P28072 239 aa8.92□□□□□ -0.98
SRP54-203ENST00000553544 OR2B8PP59922 312 aa8.92□□□□□ -0.98
SRP54-203ENST00000553544 ERVK-16P61578 105 aa8.92□□□□□ -0.98
SRP54-203ENST00000553544 EXOSC2Q13868 293 aaKnown RBP8.92□□□□□ -0.98
SRP54-203ENST00000553544 C19orf35Q6ZS72 473 aa8.92□□□□□ -0.98
SRP54-203ENST00000553544 CADM3Q8N126 398 aa8.92□□□□□ -0.98
SRP54-203ENST00000553544 CCDC71LQ8N9Z2 235 aa8.92□□□□□ -0.98
SRP54-203ENST00000553544 SCGB3A2Q96PL1 93 aa8.92□□□□□ -0.98
SRP54-203ENST00000553544 FYTTD1Q96QD9 318 aaKnown RBP8.92□□□□□ -0.98
SRP54-203ENST00000553544 ABHD1Q96SE0 405 aa8.92□□□□□ -0.98
SRP54-203ENST00000553544 PRRT1Q99946 306 aa8.92□□□□□ -0.98
SRP54-203ENST00000553544 FXYD6Q9H0Q3 95 aa8.92□□□□□ -0.98
SRP54-203ENST00000553544 FAM212BQ9NTI7 297 aaPredicted RBP8.92□□□□□ -0.98
SRP54-203ENST00000553544 COMMD9Q9P000 198 aa8.92□□□□□ -0.98
SRP54-203ENST00000553544 KLK11Q9UBX7 282 aa8.92□□□□□ -0.98
SRP54-203ENST00000553544 ALMS1Q8TCU4 4167 aa8.91□□□□□ -0.98
SRP54-203ENST00000553544 GSTZ1O43708 216 aaPredicted RBP8.91□□□□□ -0.98
SRP54-203ENST00000553544 B3GALNT1O75752 331 aa8.91□□□□□ -0.98
SRP54-203ENST00000553544 CD74P04233 296 aa8.91□□□□□ -0.98
SRP54-203ENST00000553544 TNFSF8P32971 234 aa8.91□□□□□ -0.98
SRP54-203ENST00000553544 MECP2P51608 486 aaKnown RBP8.91□□□□□ -0.98
SRP54-203ENST00000553544 CD81P60033 236 aa8.91□□□□□ -0.98
SRP54-203ENST00000553544 RPEL1Q2QD12 228 aa8.91□□□□□ -0.98
SRP54-203ENST00000553544 C15orf32Q32M92 178 aa8.91□□□□□ -0.98
SRP54-203ENST00000553544 ZNF585BQ52M93 769 aa8.91□□□□□ -0.98
SRP54-203ENST00000553544 RNASE12Q5GAN4 147 aaKnown RBP8.91□□□□□ -0.98
SRP54-203ENST00000553544 FAM209BQ5JX69 171 aa8.91□□□□□ -0.98
SRP54-203ENST00000553544 STEAP1BQ6NZ63 245 aa8.91□□□□□ -0.98
SRP54-203ENST00000553544 ZFAND1Q8TCF1 268 aa8.91□□□□□ -0.98
SRP54-203ENST00000553544 PLEKHA3Q9HB20 300 aa8.91□□□□□ -0.98
SRP54-203ENST00000553544 HRASLSQ9HDD0 168 aa8.91□□□□□ -0.98
SRP54-203ENST00000553544 TMEM140Q9NV12 185 aa8.91□□□□□ -0.98
SRP54-203ENST00000553544 SLC2A8Q9NY64 477 aa8.91□□□□□ -0.98
SRP54-203ENST00000553544 SCP2D1Q9UJQ7 156 aa8.91□□□□□ -0.98
SRP54-203ENST00000553544 IGLV11-55A0A075B6I3 123 aa8.9□□□□□ -0.98
SRP54-203ENST00000553544 PIGBOS1A0A0B4J2F0 54 aa8.9□□□□□ -0.98
SRP54-203ENST00000553544 IGLC7A0M8Q6 106 aa8.9□□□□□ -0.98
SRP54-203ENST00000553544 DPPA5A6NC42 116 aa8.9□□□□□ -0.98
SRP54-203ENST00000553544 IZUMO1RA6ND01 250 aa8.9□□□□□ -0.98
SRP54-203ENST00000553544 ATG12O94817 140 aa8.9□□□□□ -0.98
SRP54-203ENST00000553544 NDUFB8O95169 186 aa8.9□□□□□ -0.98
SRP54-203ENST00000553544 RLN1P04808 185 aa8.9□□□□□ -0.98
SRP54-203ENST00000553544 PGAM2P15259 253 aa8.9□□□□□ -0.98
SRP54-203ENST00000553544 RPA2P15927 270 aa8.9□□□□□ -0.98
SRP54-203ENST00000553544 SURF2Q15527 256 aaPredicted RBP8.9□□□□□ -0.98
SRP54-203ENST00000553544 THOC7Q6I9Y2 204 aaKnown RBP8.9□□□□□ -0.98
SRP54-203ENST00000553544 DMBX1Q8NFW5 382 aa8.9□□□□□ -0.98
SRP54-203ENST00000553544 OR2K2Q8NGT1 345 aa8.9□□□□□ -0.98
SRP54-203ENST00000553544 NEURL2Q9BR09 285 aa8.9□□□□□ -0.98
SRP54-203ENST00000553544 SRSF8Q9BRL6 282 aaKnown RBP8.9□□□□□ -0.98
SRP54-203ENST00000553544 FBXL7Q9UJT9 491 aa8.9□□□□□ -0.98
SRP54-203ENST00000553544 MARCH11A6NNE9 402 aa8.89□□□□□ -0.99
SRP54-203ENST00000553544 DHFRP00374 187 aa8.89□□□□□ -0.99
SRP54-203ENST00000553544 CD3DP04234 171 aa8.89□□□□□ -0.99
SRP54-203ENST00000553544 HIST1H1BP16401 226 aaKnown RBP8.89□□□□□ -0.99
SRP54-203ENST00000553544 LPAR6P43657 344 aa8.89□□□□□ -0.99
SRP54-203ENST00000553544 INPP1P49441 399 aa8.89□□□□□ -0.99
SRP54-203ENST00000553544 SCGB2B2Q4G0G5 96 aa8.89□□□□□ -0.99
SRP54-203ENST00000553544 PYDC2Q56P42 97 aa8.89□□□□□ -0.99
SRP54-203ENST00000553544 DEFB125Q8N687 156 aa8.89□□□□□ -0.99
SRP54-203ENST00000553544 TERB2Q8NHR7 220 aa8.89□□□□□ -0.99
SRP54-203ENST00000553544 CCDC140Q96MF4 163 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 160 ms