RNA–Protein interactions for RNA: ENST00000550987.5

CPSF6-206, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 4

Gene CPSF6, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-206ENST00000550987 SMIM9A6NGZ8 99 aa3.45□□□□□ -1.86
CPSF6-206ENST00000550987 CLDN24A6NM45 220 aa3.45□□□□□ -1.86
CPSF6-206ENST00000550987 KRBOX1C9JBD0 128 aa3.45□□□□□ -1.86
CPSF6-206ENST00000550987 E7EQ34 232 aa3.45□□□□□ -1.86
CPSF6-206ENST00000550987 F5H5K5 113 aa3.45□□□□□ -1.86
CPSF6-206ENST00000550987 LINC01619G3V211 115 aa3.45□□□□□ -1.86
CPSF6-206ENST00000550987 TNFRSF11BO00300 401 aa3.45□□□□□ -1.86
CPSF6-206ENST00000550987 ARPC5O15511 151 aa3.45□□□□□ -1.86
CPSF6-206ENST00000550987 PFDN1O60925 122 aa3.45□□□□□ -1.86
CPSF6-206ENST00000550987 YIF1AO95070 293 aa3.45□□□□□ -1.86
CPSF6-206ENST00000550987 IFNA1P01562 189 aa3.45□□□□□ -1.86
CPSF6-206ENST00000550987 MRPL3P09001 348 aaKnown RBP3.45□□□□□ -1.86
CPSF6-206ENST00000550987 ZNF688P0C7X2 276 aa3.45□□□□□ -1.86
CPSF6-206ENST00000550987 FAM228BP0C875 321 aa3.45□□□□□ -1.86
CPSF6-206ENST00000550987 DNAH10OSP0CZ25 163 aa3.45□□□□□ -1.86
CPSF6-206ENST00000550987 ERP29P30040 261 aaKnown RBP3.45□□□□□ -1.86
CPSF6-206ENST00000550987 IFNGR2P38484 337 aa3.45□□□□□ -1.86
CPSF6-206ENST00000550987 CLDN12P56749 244 aa3.45□□□□□ -1.86
CPSF6-206ENST00000550987 OR10A3P58181 314 aa3.45□□□□□ -1.86
CPSF6-206ENST00000550987 TPI1P60174 286 aa3.45□□□□□ -1.86
CPSF6-206ENST00000550987 PNOCQ13519 176 aa3.45□□□□□ -1.86
CPSF6-206ENST00000550987 APOFQ13790 326 aa3.45□□□□□ -1.86
CPSF6-206ENST00000550987 GUSBP1Q15486 140 aa3.45□□□□□ -1.86
CPSF6-206ENST00000550987 ARHGAP11BQ3KRB8 267 aa3.45□□□□□ -1.86
CPSF6-206ENST00000550987 TNFAIP8L2Q6P589 184 aaPredicted RBP3.45□□□□□ -1.86
CPSF6-206ENST00000550987 OPN5Q6U736 354 aa3.45□□□□□ -1.86
CPSF6-206ENST00000550987 SHISA6Q6ZSJ9 500 aa3.45□□□□□ -1.86
CPSF6-206ENST00000550987 GALNT10Q86SR1 603 aa3.45□□□□□ -1.86
CPSF6-206ENST00000550987 OOSP2Q86WS3 158 aa3.45□□□□□ -1.86
CPSF6-206ENST00000550987 DOLPP1Q86YN1 238 aa3.45□□□□□ -1.86
CPSF6-206ENST00000550987 C10orf107Q8IVU9 208 aa3.45□□□□□ -1.86
CPSF6-206ENST00000550987 CYB561D1Q8N8Q1 229 aa3.45□□□□□ -1.86
CPSF6-206ENST00000550987 OR4M2Q8NGB6 313 aa3.45□□□□□ -1.86
CPSF6-206ENST00000550987 OR11G2Q8NGC1 345 aa3.45□□□□□ -1.86
CPSF6-206ENST00000550987 OR4E2Q8NGC2 313 aa3.45□□□□□ -1.86
CPSF6-206ENST00000550987 OR4K17Q8NGC6 315 aa3.45□□□□□ -1.86
CPSF6-206ENST00000550987 STOML3Q8TAV4 291 aa3.45□□□□□ -1.86
CPSF6-206ENST00000550987 DCAKDQ8WVC6 231 aa3.45□□□□□ -1.86
CPSF6-206ENST00000550987 C1orf54Q8WWF1 131 aa3.45□□□□□ -1.86
CPSF6-206ENST00000550987 C11orf40Q8WZ69 217 aa3.45□□□□□ -1.86
CPSF6-206ENST00000550987 PSMF1Q92530 271 aa3.45□□□□□ -1.86
CPSF6-206ENST00000550987 PFDN5Q99471 154 aa3.45□□□□□ -1.86
CPSF6-206ENST00000550987 DOK1Q99704 481 aa3.45□□□□□ -1.86
CPSF6-206ENST00000550987 SEC22CQ9BRL7 303 aa3.45□□□□□ -1.86
CPSF6-206ENST00000550987 EMC6Q9BV81 110 aa3.45□□□□□ -1.86
CPSF6-206ENST00000550987 MAP1LC3AQ9H492 121 aa3.45□□□□□ -1.86
CPSF6-206ENST00000550987 FAM60AQ9NP50 221 aa3.45□□□□□ -1.86
CPSF6-206ENST00000550987 TMEM100Q9NV29 134 aa3.45□□□□□ -1.86
CPSF6-206ENST00000550987 ZNRD1Q9P1U0 126 aa3.45□□□□□ -1.86
CPSF6-206ENST00000550987 DHCR7Q9UBM7 475 aaKnown RBP3.45□□□□□ -1.86
CPSF6-206ENST00000550987 DNAJC12Q9UKB3 198 aa3.45□□□□□ -1.86
CPSF6-206ENST00000550987 TP53TG1Q9Y2A0 90 aa3.45□□□□□ -1.86
CPSF6-206ENST00000550987 ZNF257Q9Y2Q1 563 aa3.45□□□□□ -1.86
CPSF6-206ENST00000550987 VPS13DQ5THJ4 4388 aa3.44□□□□□ -1.86
CPSF6-206ENST00000550987 DAPL1A0PJW8 107 aa3.44□□□□□ -1.86
CPSF6-206ENST00000550987 ISPDA4D126 451 aa3.44□□□□□ -1.86
CPSF6-206ENST00000550987 C15orf65H3BRN8 121 aa3.44□□□□□ -1.86
CPSF6-206ENST00000550987 TAAR5O14804 337 aa3.44□□□□□ -1.86
CPSF6-206ENST00000550987 AZIN1O14977 448 aa3.44□□□□□ -1.86
CPSF6-206ENST00000550987 EIF1BO60739 113 aaKnown RBP3.44□□□□□ -1.86
CPSF6-206ENST00000550987 POP7O75817 140 aaKnown RBP3.44□□□□□ -1.86
CPSF6-206ENST00000550987 SOX14O95416 240 aa3.44□□□□□ -1.86
CPSF6-206ENST00000550987 CD8AP01732 235 aa3.44□□□□□ -1.86
CPSF6-206ENST00000550987 APCSP02743 223 aa3.44□□□□□ -1.86
CPSF6-206ENST00000550987 OR10J4P0C629 311 aa3.44□□□□□ -1.86
CPSF6-206ENST00000550987 ZNF823P16415 610 aa3.44□□□□□ -1.86
CPSF6-206ENST00000550987 AKR1C4P17516 323 aa3.44□□□□□ -1.86
CPSF6-206ENST00000550987 HIST1H1TP22492 207 aaPredicted RBP3.44□□□□□ -1.86
CPSF6-206ENST00000550987 ELK4P28324 431 aa3.44□□□□□ -1.86
CPSF6-206ENST00000550987 S100GP29377 79 aa3.44□□□□□ -1.86
CPSF6-206ENST00000550987 POLR2IP36954 125 aaKnown RBP3.44□□□□□ -1.86
CPSF6-206ENST00000550987 HSPA9P38646 679 aaKnown RBP3.44□□□□□ -1.86
CPSF6-206ENST00000550987 EIF1P41567 113 aaKnown RBP3.44□□□□□ -1.86
CPSF6-206ENST00000550987 GALR1P47211 349 aa3.44□□□□□ -1.86
CPSF6-206ENST00000550987 PRSS8Q16651 343 aa3.44□□□□□ -1.86
CPSF6-206ENST00000550987 TMEM205Q6UW68 189 aa3.44□□□□□ -1.86
CPSF6-206ENST00000550987 TIFABQ6ZNK6 161 aa3.44□□□□□ -1.86
CPSF6-206ENST00000550987 FAM19A1Q7Z5A9 133 aa3.44□□□□□ -1.86
CPSF6-206ENST00000550987 HAVCR2Q8TDQ0 301 aa3.44□□□□□ -1.86
CPSF6-206ENST00000550987 Q8WTZ3 238 aa3.44□□□□□ -1.86
CPSF6-206ENST00000550987 GHSRQ92847 366 aa3.44□□□□□ -1.86
CPSF6-206ENST00000550987 ZNF488Q96MN9 340 aa3.44□□□□□ -1.86
CPSF6-206ENST00000550987 TMEM56Q96MV1 263 aa3.44□□□□□ -1.86
CPSF6-206ENST00000550987 LYSMD1Q96S90 227 aa3.44□□□□□ -1.86
CPSF6-206ENST00000550987 PDCD1LG2Q9BQ51 273 aa3.44□□□□□ -1.86
CPSF6-206ENST00000550987 CMSS1Q9BQ75 279 aaKnown RBP3.44□□□□□ -1.86
CPSF6-206ENST00000550987 SFXN3Q9BWM7 321 aa3.44□□□□□ -1.86
CPSF6-206ENST00000550987 RSPO3Q9BXY4 272 aaPredicted RBP3.44□□□□□ -1.86
CPSF6-206ENST00000550987 FGF23Q9GZV9 251 aaPredicted RBP3.44□□□□□ -1.86
CPSF6-206ENST00000550987 WFDC1Q9HC57 220 aa3.44□□□□□ -1.86
CPSF6-206ENST00000550987 SPANXCQ9NY87 97 aa3.44□□□□□ -1.86
CPSF6-206ENST00000550987 ANAPC11Q9NYG5 84 aa3.44□□□□□ -1.86
CPSF6-206ENST00000550987 GSKIPQ9P0R6 139 aa3.44□□□□□ -1.86
CPSF6-206ENST00000550987 SIGLEC9Q9Y336 463 aa3.44□□□□□ -1.86
CPSF6-206ENST00000550987 SLC22A7Q9Y694 548 aa3.44□□□□□ -1.86
CPSF6-206ENST00000550987 GPR98Q8WXG9 6306 aa3.43□□□□□ -1.86
CPSF6-206ENST00000550987 ZNF407Q9C0G0 2248 aa3.43□□□□□ -1.86
CPSF6-206ENST00000550987 DSCAMO60469 2012 aa3.43□□□□□ -1.86
CPSF6-206ENST00000550987 CENPVL3A0A0U1RRI6 287 aa3.43□□□□□ -1.86
CPSF6-206ENST00000550987 FAM240AA0A1B0GVK7 77 aa3.43□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms