RNA–Protein interactions for RNA: ENST00000550376.5

PRDM4-205, Transcript of PR/SET domain 4, humanhuman

TSL 1 (best)

Gene PRDM4, Length 2,591 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM4-205ENST00000550376 LINC00311Q8N616 119 aa16.95■□□□□ 0.3
PRDM4-205ENST00000550376 RAB1CQ92928 201 aa16.95■□□□□ 0.3
PRDM4-205ENST00000550376 KPTNQ9Y664 436 aa16.95■□□□□ 0.3
PRDM4-205ENST00000550376 ZFHX3Q15911 3703 aa16.95■□□□□ 0.3
PRDM4-205ENST00000550376 TSPAN9O75954 239 aa16.94■□□□□ 0.3
PRDM4-205ENST00000550376 SOHLH1Q5JUK2 328 aa16.94■□□□□ 0.3
PRDM4-205ENST00000550376 LDLRAD2Q5SZI1 272 aa16.94■□□□□ 0.3
PRDM4-205ENST00000550376 OR4C13Q8NGP0 309 aa16.94■□□□□ 0.3
PRDM4-205ENST00000550376 OSR1Q8TAX0 266 aaPredicted RBP16.94■□□□□ 0.3
PRDM4-205ENST00000550376 ZNF596Q8TC21 504 aa16.94■□□□□ 0.3
PRDM4-205ENST00000550376 WDR83OSQ9Y284 106 aa16.94■□□□□ 0.3
PRDM4-205ENST00000550376 PRB1P04280 392 aa16.94■□□□□ 0.3
PRDM4-205ENST00000550376 SRP19P09132 144 aaKnown RBP16.94■□□□□ 0.3
PRDM4-205ENST00000550376 MIC13Q5XKP0 118 aa16.94■□□□□ 0.3
PRDM4-205ENST00000550376 CENPVQ7Z7K6 275 aaPredicted RBP16.94■□□□□ 0.3
PRDM4-205ENST00000550376 RPS10P5Q9NQ39 176 aa16.94■□□□□ 0.3
PRDM4-205ENST00000550376 IGLV2-23P01705 113 aa16.93■□□□□ 0.3
PRDM4-205ENST00000550376 RAB11AP62491 216 aa16.93■□□□□ 0.3
PRDM4-205ENST00000550376 PRCDQ00LT1 54 aa16.93■□□□□ 0.3
PRDM4-205ENST00000550376 TMEM177Q53S58 311 aa16.93■□□□□ 0.3
PRDM4-205ENST00000550376 AWAT1Q58HT5 328 aa16.93■□□□□ 0.3
PRDM4-205ENST00000550376 MBD3L1Q8WWY6 194 aa16.93■□□□□ 0.3
PRDM4-205ENST00000550376 TIMD4Q96H15 378 aa16.93■□□□□ 0.3
PRDM4-205ENST00000550376 MGST2Q99735 147 aa16.93■□□□□ 0.3
PRDM4-205ENST00000550376 MIOXQ9UGB7 285 aa16.93■□□□□ 0.3
PRDM4-205ENST00000550376 WASHC3Q9Y3C0 194 aa16.93■□□□□ 0.3
PRDM4-205ENST00000550376 BTBD17A6NE02 478 aa16.93■□□□□ 0.3
PRDM4-205ENST00000550376 IGLV1-47P01700 117 aa16.93■□□□□ 0.3
PRDM4-205ENST00000550376 IGHV3-48P01763 117 aa16.93■□□□□ 0.3
PRDM4-205ENST00000550376 HBE1P02100 147 aa16.93■□□□□ 0.3
PRDM4-205ENST00000550376 KLRD1Q13241 179 aa16.93■□□□□ 0.3
PRDM4-205ENST00000550376 COMMD5Q9GZQ3 224 aa16.93■□□□□ 0.3
PRDM4-205ENST00000550376 BET1LQ9NYM9 111 aa16.93■□□□□ 0.3
PRDM4-205ENST00000550376 TIMM9Q9Y5J7 89 aa16.93■□□□□ 0.3
PRDM4-205ENST00000550376 RPL8P62917 257 aaKnown RBP16.92■□□□□ 0.3
PRDM4-205ENST00000550376 HLA-DRB5Q30154 266 aa16.92■□□□□ 0.3
PRDM4-205ENST00000550376 DTX2Q86UW9 622 aa16.92■□□□□ 0.3
PRDM4-205ENST00000550376 ZNF430Q9H8G1 570 aaPredicted RBP16.92■□□□□ 0.3
PRDM4-205ENST00000550376 BUB1B-PAK6H3BSN5 160 aa16.92■□□□□ 0.3
PRDM4-205ENST00000550376 RAB24Q969Q5 203 aa16.92■□□□□ 0.3
PRDM4-205ENST00000550376 CLEC7AQ9BXN2 247 aa16.92■□□□□ 0.3
PRDM4-205ENST00000550376 TRAV1-1A0A0B4J248 108 aa16.91■□□□□ 0.3
PRDM4-205ENST00000550376 A0A1B0GW64 132 aa16.91■□□□□ 0.3
PRDM4-205ENST00000550376 REG1AP05451 166 aa16.91■□□□□ 0.3
PRDM4-205ENST00000550376 ZNF506Q5JVG8 444 aa16.91■□□□□ 0.3
PRDM4-205ENST00000550376 INSIG2Q9Y5U4 225 aa16.91■□□□□ 0.3
PRDM4-205ENST00000550376 CD24P25063 80 aa16.91■□□□□ 0.3
PRDM4-205ENST00000550376 C8orf31Q8N9H6 132 aa16.91■□□□□ 0.3
PRDM4-205ENST00000550376 NEU4Q8WWR8 484 aaPredicted RBP16.91■□□□□ 0.3
PRDM4-205ENST00000550376 LOC102723971A0A1B0GUV8 181 aa16.9■□□□□ 0.3
PRDM4-205ENST00000550376 CGB1A6NKQ9 187 aa16.9■□□□□ 0.3
PRDM4-205ENST00000550376 RNF224P0DH78 156 aa16.9■□□□□ 0.3
PRDM4-205ENST00000550376 C19orf35Q6ZS72 473 aa16.9■□□□□ 0.3
PRDM4-205ENST00000550376 PDPNQ86YL7 162 aa16.9■□□□□ 0.3
PRDM4-205ENST00000550376 OR4P4Q8NGL7 312 aa16.9■□□□□ 0.3
PRDM4-205ENST00000550376 ISOC2Q96AB3 205 aa16.9■□□□□ 0.3
PRDM4-205ENST00000550376 CHODLQ9H9P2 273 aa16.9■□□□□ 0.3
PRDM4-205ENST00000550376 DOPEY1Q5JWR5 2465 aa16.9■□□□□ 0.3
PRDM4-205ENST00000550376 C7orf77A4D0Y5 90 aa16.9■□□□□ 0.3
PRDM4-205ENST00000550376 YIF1AO95070 293 aa16.9■□□□□ 0.3
PRDM4-205ENST00000550376 ZNF137PP52743 207 aa16.9■□□□□ 0.3
PRDM4-205ENST00000550376 PRRX1P54821 245 aa16.9■□□□□ 0.3
PRDM4-205ENST00000550376 ZNF257Q9Y2Q1 563 aa16.9■□□□□ 0.3
PRDM4-205ENST00000550376 HILPDAQ9Y5L2 63 aa16.9■□□□□ 0.3
PRDM4-205ENST00000550376 SOX15O60248 233 aa16.89■□□□□ 0.3
PRDM4-205ENST00000550376 LIPFP07098 398 aa16.89■□□□□ 0.3
PRDM4-205ENST00000550376 BCL2P10415 239 aa16.89■□□□□ 0.3
PRDM4-205ENST00000550376 SSBP3Q9BWW4 388 aaPredicted RBP16.89■□□□□ 0.3
PRDM4-205ENST00000550376 NDUFA4L2Q9NRX3 87 aa16.89■□□□□ 0.3
PRDM4-205ENST00000550376 FAM208BQ5VWN6 2430 aa16.89■□□□□ 0.29
PRDM4-205ENST00000550376 IGHV1-3A0A0C4DH29 117 aa16.89■□□□□ 0.29
PRDM4-205ENST00000550376 C17orf112F2Z3M2 114 aa16.89■□□□□ 0.29
PRDM4-205ENST00000550376 GATA2P23769 480 aaPredicted RBP16.89■□□□□ 0.29
PRDM4-205ENST00000550376 ZFP36P26651 326 aaKnown RBP16.89■□□□□ 0.29
PRDM4-205ENST00000550376 GGTLC1Q9BX51 225 aa16.89■□□□□ 0.29
PRDM4-205ENST00000550376 LOC105371242A0A075B767 164 aa16.88■□□□□ 0.29
PRDM4-205ENST00000550376 IGFBP2P18065 325 aa16.88■□□□□ 0.29
PRDM4-205ENST00000550376 WT1-ASQ06250 92 aa16.88■□□□□ 0.29
PRDM4-205ENST00000550376 GPR6P46095 362 aaPredicted RBP16.88■□□□□ 0.29
PRDM4-205ENST00000550376 MRGPRG-AS1Q2M3A8 158 aa16.88■□□□□ 0.29
PRDM4-205ENST00000550376 LHFPL4Q7Z7J7 247 aa16.88■□□□□ 0.29
PRDM4-205ENST00000550376 LY6G5BQ8NDX9 201 aa16.88■□□□□ 0.29
PRDM4-205ENST00000550376 NPVFQ9HCQ7 196 aa16.88■□□□□ 0.29
PRDM4-205ENST00000550376 PXMP4Q9Y6I8 212 aa16.88■□□□□ 0.29
PRDM4-205ENST00000550376 LRRK2Q5S007 2527 aa16.88■□□□□ 0.29
PRDM4-205ENST00000550376 H3BQ15 152 aa16.87■□□□□ 0.29
PRDM4-205ENST00000550376 DLK1P80370 383 aa16.87■□□□□ 0.29
PRDM4-205ENST00000550376 OR5B3Q8NH48 314 aa16.87■□□□□ 0.29
PRDM4-205ENST00000550376 RPEQ96AT9 228 aa16.87■□□□□ 0.29
PRDM4-205ENST00000550376 ACTR3CQ9C0K3 210 aaPredicted RBP16.87■□□□□ 0.29
PRDM4-205ENST00000550376 IGKV1OR2-108A0A075B7D4 117 aa16.87■□□□□ 0.29
PRDM4-205ENST00000550376 HSPB1P04792 205 aaKnown RBP16.87■□□□□ 0.29
PRDM4-205ENST00000550376 RNASE2P10153 161 aaKnown RBP16.87■□□□□ 0.29
PRDM4-205ENST00000550376 IL3RAP26951 378 aa16.87■□□□□ 0.29
PRDM4-205ENST00000550376 KHDC3LQ587J8 217 aa16.87■□□□□ 0.29
PRDM4-205ENST00000550376 TMEM167AQ8TBQ9 72 aa16.87■□□□□ 0.29
PRDM4-205ENST00000550376 FKBP11Q9NYL4 201 aa16.87■□□□□ 0.29
PRDM4-205ENST00000550376 CTXND1A0A1B0GTU2 59 aa16.86■□□□□ 0.29
PRDM4-205ENST00000550376 A0A1W2PPH5 198 aa16.86■□□□□ 0.29
PRDM4-205ENST00000550376 FSTL3O95633 263 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms