RNA–Protein interactions for RNA: ENST00000550075.5

CPSF6-205, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 4

Gene CPSF6, Length 540 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-205ENST00000550075 OR51B2Q9Y5P1 312 aa20.04■□□□□ 0.8
CPSF6-205ENST00000550075 TEX13DA0A0J9YY54 714 aaPredicted RBP20.03■□□□□ 0.8
CPSF6-205ENST00000550075 C15orf61A6NNL5 157 aa20.03■□□□□ 0.8
CPSF6-205ENST00000550075 SEC14L6B5MCN3 397 aa20.03■□□□□ 0.8
CPSF6-205ENST00000550075 OVOL1O14753 267 aa20.03■□□□□ 0.8
CPSF6-205ENST00000550075 PRH1P02810 166 aa20.03■□□□□ 0.8
CPSF6-205ENST00000550075 CTRB1P17538 263 aa20.03■□□□□ 0.8
CPSF6-205ENST00000550075 ZNF45Q02386 682 aa20.03■□□□□ 0.8
CPSF6-205ENST00000550075 EXOSC2Q13868 293 aaKnown RBP20.03■□□□□ 0.8
CPSF6-205ENST00000550075 CTRB2Q6GPI1 263 aa20.03■□□□□ 0.8
CPSF6-205ENST00000550075 ZNF343Q6P1L6 599 aa20.03■□□□□ 0.8
CPSF6-205ENST00000550075 OR4A16Q8NH70 328 aa20.03■□□□□ 0.8
CPSF6-205ENST00000550075 IGLC7A0M8Q6 106 aa20.02■□□□□ 0.8
CPSF6-205ENST00000550075 CGB1A6NKQ9 187 aa20.02■□□□□ 0.8
CPSF6-205ENST00000550075 IGKV1-39P01597 117 aa20.02■□□□□ 0.8
CPSF6-205ENST00000550075 IGKV1D-39P04432 117 aa20.02■□□□□ 0.8
CPSF6-205ENST00000550075 UCP1P25874 307 aa20.02■□□□□ 0.8
CPSF6-205ENST00000550075 INPP1P49441 399 aa20.02■□□□□ 0.8
CPSF6-205ENST00000550075 SLURP1P55000 103 aa20.02■□□□□ 0.8
CPSF6-205ENST00000550075 GDPD1Q8N9F7 314 aa20.02■□□□□ 0.8
CPSF6-205ENST00000550075 DCUN1D4Q92564 292 aa20.02■□□□□ 0.8
CPSF6-205ENST00000550075 LSM10Q969L4 123 aaKnown RBP20.02■□□□□ 0.8
CPSF6-205ENST00000550075 HINT2Q9BX68 163 aa20.02■□□□□ 0.8
CPSF6-205ENST00000550075 C5orf66Q9H5L9 145 aa20.02■□□□□ 0.8
CPSF6-205ENST00000550075 NAA60Q9H7X0 242 aa20.02■□□□□ 0.8
CPSF6-205ENST00000550075 GPR132Q9UNW8 380 aa20.02■□□□□ 0.8
CPSF6-205ENST00000550075 NSG2Q9Y328 171 aa20.02■□□□□ 0.8
CPSF6-205ENST00000550075 TEX50A0A1B0GTY4 177 aa20.01■□□□□ 0.79
CPSF6-205ENST00000550075 ANKRD34BA5PLL1 514 aa20.01■□□□□ 0.79
CPSF6-205ENST00000550075 OR2J3O76001 311 aa20.01■□□□□ 0.79
CPSF6-205ENST00000550075 TRIQKQ629K1 86 aa20.01■□□□□ 0.79
CPSF6-205ENST00000550075 RNASE11Q8TAA1 199 aaKnown RBP20.01■□□□□ 0.79
CPSF6-205ENST00000550075 TMEM56Q96MV1 263 aa20.01■□□□□ 0.79
CPSF6-205ENST00000550075 RTBDNQ9BSG5 229 aaPredicted RBP20.01■□□□□ 0.79
CPSF6-205ENST00000550075 SRRQ9GZT4 340 aa20.01■□□□□ 0.79
CPSF6-205ENST00000550075 TMEM14BQ9NUH8 114 aa20.01■□□□□ 0.79
CPSF6-205ENST00000550075 PEF1Q9UBV8 284 aaKnown RBP20.01■□□□□ 0.79
CPSF6-205ENST00000550075 RBMXL2O75526 392 aaKnown RBP20■□□□□ 0.79
CPSF6-205ENST00000550075 REG1AP05451 166 aa20■□□□□ 0.79
CPSF6-205ENST00000550075 HOXD3P31249 432 aaPredicted RBP20■□□□□ 0.79
CPSF6-205ENST00000550075 C15orf32Q32M92 178 aa20■□□□□ 0.79
CPSF6-205ENST00000550075 ZNF57Q68EA5 555 aaPredicted RBP20■□□□□ 0.79
CPSF6-205ENST00000550075 TMEM222Q9H0R3 208 aa20■□□□□ 0.79
CPSF6-205ENST00000550075 FBXL7Q9UJT9 491 aa20■□□□□ 0.79
CPSF6-205ENST00000550075 CRYM-AS1A6NIL9 109 aa19.99■□□□□ 0.79
CPSF6-205ENST00000550075 WIPF1O43516 503 aa19.99■□□□□ 0.79
CPSF6-205ENST00000550075 INSL3P51460 131 aa19.99■□□□□ 0.79
CPSF6-205ENST00000550075 DHODHQ02127 395 aa19.99■□□□□ 0.79
CPSF6-205ENST00000550075 SP6Q3SY56 376 aa19.99■□□□□ 0.79
CPSF6-205ENST00000550075 PDLIM3Q53GG5 364 aaPredicted RBP19.99■□□□□ 0.79
CPSF6-205ENST00000550075 SGPP2Q8IWX5 399 aa19.99■□□□□ 0.79
CPSF6-205ENST00000550075 DLX4Q92988 240 aaPredicted RBP19.99■□□□□ 0.79
CPSF6-205ENST00000550075 RRNAD1Q96FB5 475 aaKnown RBP19.99■□□□□ 0.79
CPSF6-205ENST00000550075 NDUFA4L2Q9NRX3 87 aa19.99■□□□□ 0.79
CPSF6-205ENST00000550075 THYN1Q9P016 225 aa19.99■□□□□ 0.79
CPSF6-205ENST00000550075 OR5AC1P0C628 307 aa19.98■□□□□ 0.79
CPSF6-205ENST00000550075 OR13C7P0DN81 318 aa19.98■□□□□ 0.79
CPSF6-205ENST00000550075 MECP2P51608 486 aaKnown RBP19.98■□□□□ 0.79
CPSF6-205ENST00000550075 EGFEM1PQ0D2K5 195 aa19.98■□□□□ 0.79
CPSF6-205ENST00000550075 C19orf35Q6ZS72 473 aa19.98■□□□□ 0.79
CPSF6-205ENST00000550075 OR10W1Q8NGF6 305 aa19.98■□□□□ 0.79
CPSF6-205ENST00000550075 KCNIP3Q9Y2W7 256 aa19.98■□□□□ 0.79
CPSF6-205ENST00000550075 KLK9Q2XQG4 91 aa19.97■□□□□ 0.79
CPSF6-205ENST00000550075 FANCD2OSQ96PS1 177 aa19.97■□□□□ 0.79
CPSF6-205ENST00000550075 KLK9Q9UKQ9 250 aa19.97■□□□□ 0.79
CPSF6-205ENST00000550075 IGLV11-55A0A075B6I3 123 aa19.96■□□□□ 0.79
CPSF6-205ENST00000550075 IGKV1-5P01602 117 aa19.96■□□□□ 0.79
CPSF6-205ENST00000550075 RPEL1Q2QD12 228 aa19.96■□□□□ 0.79
CPSF6-205ENST00000550075 FAM219AQ8IW50 185 aa19.96■□□□□ 0.79
CPSF6-205ENST00000550075 RBPMSQ93062 196 aaKnown RBP19.96■□□□□ 0.79
CPSF6-205ENST00000550075 EEF1AKMT3Q96AZ1 226 aa19.96■□□□□ 0.79
CPSF6-205ENST00000550075 CXorf58Q96LI9 332 aa19.96■□□□□ 0.79
CPSF6-205ENST00000550075 AURKAIP1Q9NWT8 199 aaPredicted RBP19.96■□□□□ 0.79
CPSF6-205ENST00000550075 PRB2P02812 416 aaPredicted RBP19.95■□□□□ 0.78
CPSF6-205ENST00000550075 WT1-ASQ06250 92 aa19.95■□□□□ 0.78
CPSF6-205ENST00000550075 TATDN3Q17R31 274 aa19.95■□□□□ 0.78
CPSF6-205ENST00000550075 ZNF429Q86V71 674 aa19.95■□□□□ 0.78
CPSF6-205ENST00000550075 OR1L6Q8NGR2 347 aa19.95■□□□□ 0.78
CPSF6-205ENST00000550075 SLC25A21Q9BQT8 299 aaPredicted RBP19.95■□□□□ 0.78
CPSF6-205ENST00000550075 PDCD10Q9BUL8 212 aa19.95■□□□□ 0.78
CPSF6-205ENST00000550075 ELOVL1Q9BW60 279 aa19.95■□□□□ 0.78
CPSF6-205ENST00000550075 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP19.94■□□□□ 0.78
CPSF6-205ENST00000550075 SAP30O75446 220 aa19.94■□□□□ 0.78
CPSF6-205ENST00000550075 CDS2O95674 445 aa19.94■□□□□ 0.78
CPSF6-205ENST00000550075 ANXA3P12429 323 aa19.94■□□□□ 0.78
CPSF6-205ENST00000550075 HSPE1P61604 102 aaKnown RBP19.94■□□□□ 0.78
CPSF6-205ENST00000550075 PRCDQ00LT1 54 aa19.94■□□□□ 0.78
CPSF6-205ENST00000550075 GLYATL2Q8WU03 294 aa19.94■□□□□ 0.78
CPSF6-205ENST00000550075 GALNT14Q96FL9 552 aa19.94■□□□□ 0.78
CPSF6-205ENST00000550075 F11RQ9Y624 299 aaKnown RBP19.94■□□□□ 0.78
CPSF6-205ENST00000550075 DNAH3Q8TD57 4116 aa19.93■□□□□ 0.78
CPSF6-205ENST00000550075 DBX1A6NMT0 343 aa19.93■□□□□ 0.78
CPSF6-205ENST00000550075 NDUFB8O95169 186 aa19.93■□□□□ 0.78
CPSF6-205ENST00000550075 TRBV12-3P01733 135 aa19.93■□□□□ 0.78
CPSF6-205ENST00000550075 P0C879 139 aa19.93■□□□□ 0.78
CPSF6-205ENST00000550075 AKR1C4P17516 323 aa19.93■□□□□ 0.78
CPSF6-205ENST00000550075 PLEKHA3Q9HB20 300 aa19.93■□□□□ 0.78
CPSF6-205ENST00000550075 TRBV7-1A0A0A6YYK4 115 aa19.92■□□□□ 0.78
CPSF6-205ENST00000550075 PIGBOS1A0A0B4J2F0 54 aa19.92■□□□□ 0.78
CPSF6-205ENST00000550075 NAP1L6A6NFF2 107 aa19.92■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms