RNA–Protein interactions for RNA: ENST00000549271.1

DDX54-206, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 756 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-206ENST00000549271 F2RP25116 425 aa9.15□□□□□ -0.94
DDX54-206ENST00000549271 PSMB6P28072 239 aa9.15□□□□□ -0.94
DDX54-206ENST00000549271 RCVRNP35243 200 aa9.15□□□□□ -0.94
DDX54-206ENST00000549271 OR2B8PP59922 312 aa9.15□□□□□ -0.94
DDX54-206ENST00000549271 ATP5G2Q06055 141 aa9.15□□□□□ -0.94
DDX54-206ENST00000549271 ZNF585BQ52M93 769 aa9.15□□□□□ -0.94
DDX54-206ENST00000549271 SLC25A42Q86VD7 318 aa9.15□□□□□ -0.94
DDX54-206ENST00000549271 NECAP1Q8NC96 275 aa9.15□□□□□ -0.94
DDX54-206ENST00000549271 OR52I2Q8NH67 350 aa9.15□□□□□ -0.94
DDX54-206ENST00000549271 CD300LFQ8TDQ1 290 aa9.15□□□□□ -0.94
DDX54-206ENST00000549271 AP3S1Q92572 193 aa9.15□□□□□ -0.94
DDX54-206ENST00000549271 BORCS5Q969J3 196 aa9.15□□□□□ -0.94
DDX54-206ENST00000549271 KRTAP4-5Q9BYR2 181 aa9.15□□□□□ -0.94
DDX54-206ENST00000549271 PLEKHA3Q9HB20 300 aa9.15□□□□□ -0.94
DDX54-206ENST00000549271 HRASLSQ9HDD0 168 aa9.15□□□□□ -0.94
DDX54-206ENST00000549271 ZC4H2Q9NQZ6 224 aa9.15□□□□□ -0.94
DDX54-206ENST00000549271 KLK11Q9UBX7 282 aa9.15□□□□□ -0.94
DDX54-206ENST00000549271 DMRT1Q9Y5R6 373 aa9.15□□□□□ -0.94
DDX54-206ENST00000549271 M0QYG6 137 aa9.14□□□□□ -0.95
DDX54-206ENST00000549271 CTDSP2O14595 271 aa9.14□□□□□ -0.95
DDX54-206ENST00000549271 OR2J3O76001 311 aa9.14□□□□□ -0.95
DDX54-206ENST00000549271 TPPPO94811 219 aa9.14□□□□□ -0.95
DDX54-206ENST00000549271 RPA2P15927 270 aa9.14□□□□□ -0.95
DDX54-206ENST00000549271 CTRB1P17538 263 aa9.14□□□□□ -0.95
DDX54-206ENST00000549271 LPAR6P43657 344 aa9.14□□□□□ -0.95
DDX54-206ENST00000549271 UCP3P55916 312 aa9.14□□□□□ -0.95
DDX54-206ENST00000549271 TSPAN5P62079 268 aa9.14□□□□□ -0.95
DDX54-206ENST00000549271 EXOSC2Q13868 293 aaKnown RBP9.14□□□□□ -0.95
DDX54-206ENST00000549271 DEFB114Q30KQ6 69 aa9.14□□□□□ -0.95
DDX54-206ENST00000549271 CD300EQ496F6 205 aaPredicted RBP9.14□□□□□ -0.95
DDX54-206ENST00000549271 CTRB2Q6GPI1 263 aa9.14□□□□□ -0.95
DDX54-206ENST00000549271 CLVS1Q8IUQ0 354 aaPredicted RBP9.14□□□□□ -0.95
DDX54-206ENST00000549271 FCAMRQ8WWV6 532 aa9.14□□□□□ -0.95
DDX54-206ENST00000549271 DGCR14Q96DF8 476 aaKnown RBP9.14□□□□□ -0.95
DDX54-206ENST00000549271 NEURL2Q9BR09 285 aa9.14□□□□□ -0.95
DDX54-206ENST00000549271 TMEM140Q9NV12 185 aa9.14□□□□□ -0.95
DDX54-206ENST00000549271 SLC2A8Q9NY64 477 aa9.14□□□□□ -0.95
DDX54-206ENST00000549271 TECRQ9NZ01 308 aaKnown RBP9.14□□□□□ -0.95
DDX54-206ENST00000549271 COMMD9Q9P000 198 aa9.14□□□□□ -0.95
DDX54-206ENST00000549271 EXTL2Q9UBQ6 330 aa9.14□□□□□ -0.95
DDX54-206ENST00000549271 MTFP1Q9UDX5 166 aa9.14□□□□□ -0.95
DDX54-206ENST00000549271 DNAH11Q96DT5 4516 aa9.14□□□□□ -0.95
DDX54-206ENST00000549271 IGLC7A0M8Q6 106 aa9.13□□□□□ -0.95
DDX54-206ENST00000549271 LGALS9O00182 355 aa9.13□□□□□ -0.95
DDX54-206ENST00000549271 NDUFB8O95169 186 aa9.13□□□□□ -0.95
DDX54-206ENST00000549271 REG1AP05451 166 aa9.13□□□□□ -0.95
DDX54-206ENST00000549271 FGF2P09038 288 aa9.13□□□□□ -0.95
DDX54-206ENST00000549271 CD81P60033 236 aa9.13□□□□□ -0.95
DDX54-206ENST00000549271 EWSR1Q01844 656 aaKnown RBP eCLIP9.13□□□□□ -0.95
DDX54-206ENST00000549271 C15orf32Q32M92 178 aa9.13□□□□□ -0.95
DDX54-206ENST00000549271 PHLDA2Q53GA4 152 aa9.13□□□□□ -0.95
DDX54-206ENST00000549271 RNASE12Q5GAN4 147 aaKnown RBP9.13□□□□□ -0.95
DDX54-206ENST00000549271 CMTM1Q8IZ96 169 aa9.13□□□□□ -0.95
DDX54-206ENST00000549271 CADM3Q8N126 398 aa9.13□□□□□ -0.95
DDX54-206ENST00000549271 DMBX1Q8NFW5 382 aa9.13□□□□□ -0.95
DDX54-206ENST00000549271 FBXL7Q9UJT9 491 aa9.13□□□□□ -0.95
DDX54-206ENST00000549271 TEX50A0A1B0GTY4 177 aa9.12□□□□□ -0.95
DDX54-206ENST00000549271 DPPA5A6NC42 116 aa9.12□□□□□ -0.95
DDX54-206ENST00000549271 C2orf70A6NJV1 201 aa9.12□□□□□ -0.95
DDX54-206ENST00000549271 MARCH11A6NNE9 402 aa9.12□□□□□ -0.95
DDX54-206ENST00000549271 GGCTO75223 188 aaKnown RBP9.12□□□□□ -0.95
DDX54-206ENST00000549271 CD3DP04234 171 aa9.12□□□□□ -0.95
DDX54-206ENST00000549271 CD7P09564 240 aa9.12□□□□□ -0.95
DDX54-206ENST00000549271 TMBIM6P55061 237 aa9.12□□□□□ -0.95
DDX54-206ENST00000549271 LPCAT3Q6P1A2 487 aa9.12□□□□□ -0.95
DDX54-206ENST00000549271 LHFPL1Q86WI0 220 aa9.12□□□□□ -0.95
DDX54-206ENST00000549271 GPHB5Q86YW7 130 aa9.12□□□□□ -0.95
DDX54-206ENST00000549271 OR10W1Q8NGF6 305 aa9.12□□□□□ -0.95
DDX54-206ENST00000549271 DYNC2LI1Q8TCX1 351 aa9.12□□□□□ -0.95
DDX54-206ENST00000549271 KLK5Q9Y337 293 aaPredicted RBP9.12□□□□□ -0.95
DDX54-206ENST00000549271 HERC1Q15751 4861 aa9.12□□□□□ -0.95
DDX54-206ENST00000549271 IGLV11-55A0A075B6I3 123 aa9.11□□□□□ -0.95
DDX54-206ENST00000549271 PPP5D1E7EU14 171 aa9.11□□□□□ -0.95
DDX54-206ENST00000549271 KRASP01116 189 aa9.11□□□□□ -0.95
DDX54-206ENST00000549271 IGKV1-39P01597 117 aa9.11□□□□□ -0.95
DDX54-206ENST00000549271 IGKV1D-39P04432 117 aa9.11□□□□□ -0.95
DDX54-206ENST00000549271 FOLR2P14207 255 aa9.11□□□□□ -0.95
DDX54-206ENST00000549271 G6PCP35575 357 aa9.11□□□□□ -0.95
DDX54-206ENST00000549271 RPL5P46777 297 aaKnown RBP9.11□□□□□ -0.95
DDX54-206ENST00000549271 TBC1D26Q86UD7 250 aa9.11□□□□□ -0.95
DDX54-206ENST00000549271 SLC38A6Q8IZM9 456 aa9.11□□□□□ -0.95
DDX54-206ENST00000549271 DEFB125Q8N687 156 aa9.11□□□□□ -0.95
DDX54-206ENST00000549271 OR4D10Q8NGI6 311 aa9.11□□□□□ -0.95
DDX54-206ENST00000549271 DYNLRB2Q8TF09 96 aa9.11□□□□□ -0.95
DDX54-206ENST00000549271 RAB2BQ8WUD1 216 aa9.11□□□□□ -0.95
DDX54-206ENST00000549271 CCDC140Q96MF4 163 aa9.11□□□□□ -0.95
DDX54-206ENST00000549271 BCL7BQ9BQE9 202 aa9.11□□□□□ -0.95
DDX54-206ENST00000549271 SRSF8Q9BRL6 282 aaKnown RBP9.11□□□□□ -0.95
DDX54-206ENST00000549271 OVOL2Q9BRP0 275 aa9.11□□□□□ -0.95
DDX54-206ENST00000549271 COMMD5Q9GZQ3 224 aa9.11□□□□□ -0.95
DDX54-206ENST00000549271 NDUFA4L2Q9NRX3 87 aa9.11□□□□□ -0.95
DDX54-206ENST00000549271 FAM212BQ9NTI7 297 aaPredicted RBP9.11□□□□□ -0.95
DDX54-206ENST00000549271 NSG2Q9Y328 171 aa9.11□□□□□ -0.95
DDX54-206ENST00000549271 S4R3C0 116 aa9.11□□□□□ -0.95
DDX54-206ENST00000549271 PKD1P98161 4303 aa9.11□□□□□ -0.95
DDX54-206ENST00000549271 A0A1B0GVY2 172 aa9.1□□□□□ -0.95
DDX54-206ENST00000549271 OR11H12B2RN74 326 aa9.1□□□□□ -0.95
DDX54-206ENST00000549271 RGS5O15539 181 aa9.1□□□□□ -0.95
DDX54-206ENST00000549271 OR2C1O95371 312 aa9.1□□□□□ -0.95
DDX54-206ENST00000549271 IGHV3-23P01764 117 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms