RNA–Protein interactions for RNA: ENST00000548786.1

DDX54-205, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 498 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-205ENST00000548786 CLEC19AQ6UXS0 136 aa12.07□□□□□ -0.48
DDX54-205ENST00000548786 OR1L8Q8NGR8 309 aa12.07□□□□□ -0.48
DDX54-205ENST00000548786 TP53RKQ96S44 253 aa12.07□□□□□ -0.48
DDX54-205ENST00000548786 ELOVL1Q9BW60 279 aa12.07□□□□□ -0.48
DDX54-205ENST00000548786 RBM38Q9H0Z9 239 aaKnown RBP12.07□□□□□ -0.48
DDX54-205ENST00000548786 ZC4H2Q9NQZ6 224 aa12.07□□□□□ -0.48
DDX54-205ENST00000548786 COPZ2Q9P299 210 aa12.07□□□□□ -0.48
DDX54-205ENST00000548786 RSL24D1Q9UHA3 163 aaKnown RBP12.07□□□□□ -0.48
DDX54-205ENST00000548786 DNAH9Q9NYC9 4486 aa12.06□□□□□ -0.48
DDX54-205ENST00000548786 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.06□□□□□ -0.48
DDX54-205ENST00000548786 MFSD2BA6NFX1 497 aa12.06□□□□□ -0.48
DDX54-205ENST00000548786 DISC1C4P0D8 188 aa12.06□□□□□ -0.48
DDX54-205ENST00000548786 CTDSPLO15194 276 aa12.06□□□□□ -0.48
DDX54-205ENST00000548786 AKAIN1P0CW23 69 aa12.06□□□□□ -0.48
DDX54-205ENST00000548786 SSBP1Q04837 148 aaKnown RBP12.06□□□□□ -0.48
DDX54-205ENST00000548786 WT1-ASQ06250 92 aa12.06□□□□□ -0.48
DDX54-205ENST00000548786 MEF2DQ14814 521 aa12.06□□□□□ -0.48
DDX54-205ENST00000548786 H2BFWTQ7Z2G1 175 aa12.06□□□□□ -0.48
DDX54-205ENST00000548786 OR9G4Q8NGQ1 327 aa12.06□□□□□ -0.48
DDX54-205ENST00000548786 SEC22AQ96IW7 307 aa12.06□□□□□ -0.48
DDX54-205ENST00000548786 CCDC140Q96MF4 163 aa12.06□□□□□ -0.48
DDX54-205ENST00000548786 NXF2Q9GZY0 626 aaKnown RBP12.06□□□□□ -0.48
DDX54-205ENST00000548786 DMRT1Q9Y5R6 373 aa12.06□□□□□ -0.48
DDX54-205ENST00000548786 IGLV11-55A0A075B6I3 123 aa12.05□□□□□ -0.48
DDX54-205ENST00000548786 IGHV3-21A0A0B4J1V1 117 aa12.05□□□□□ -0.48
DDX54-205ENST00000548786 C3orf85A0A1B0GTC6 90 aa12.05□□□□□ -0.48
DDX54-205ENST00000548786 H0Y980 276 aa12.05□□□□□ -0.48
DDX54-205ENST00000548786 RND3P61587 244 aa12.05□□□□□ -0.48
DDX54-205ENST00000548786 CD69Q07108 199 aa12.05□□□□□ -0.48
DDX54-205ENST00000548786 TRIM16LQ309B1 348 aa12.05□□□□□ -0.48
DDX54-205ENST00000548786 PYDC2Q56P42 97 aa12.05□□□□□ -0.48
DDX54-205ENST00000548786 SPINK9Q5DT21 86 aa12.05□□□□□ -0.48
DDX54-205ENST00000548786 OR6Q1Q8NGQ2 317 aa12.05□□□□□ -0.48
DDX54-205ENST00000548786 OR4A16Q8NH70 328 aa12.05□□□□□ -0.48
DDX54-205ENST00000548786 ZFAND1Q8TCF1 268 aa12.05□□□□□ -0.48
DDX54-205ENST00000548786 EEF1AKMT3Q96AZ1 226 aa12.05□□□□□ -0.48
DDX54-205ENST00000548786 ZNF486Q96H40 463 aaPredicted RBP12.05□□□□□ -0.48
DDX54-205ENST00000548786 NDUFA4L2Q9NRX3 87 aa12.05□□□□□ -0.48
DDX54-205ENST00000548786 MCUBQ9NWR8 336 aa12.05□□□□□ -0.48
DDX54-205ENST00000548786 PRNDQ9UKY0 176 aa12.05□□□□□ -0.48
DDX54-205ENST00000548786 C15orf61A6NNL5 157 aa12.04□□□□□ -0.48
DDX54-205ENST00000548786 GSTZ1O43708 216 aaPredicted RBP12.04□□□□□ -0.48
DDX54-205ENST00000548786 OR2C1O95371 312 aa12.04□□□□□ -0.48
DDX54-205ENST00000548786 HIST1H1BP16401 226 aaKnown RBP12.04□□□□□ -0.48
DDX54-205ENST00000548786 ARL3P36405 182 aa12.04□□□□□ -0.48
DDX54-205ENST00000548786 AKR1C2P52895 323 aa12.04□□□□□ -0.48
DDX54-205ENST00000548786 SLC25A24Q6NUK1 477 aa12.04□□□□□ -0.48
DDX54-205ENST00000548786 IL34Q6ZMJ4 242 aa12.04□□□□□ -0.48
DDX54-205ENST00000548786 GDPD1Q8N9F7 314 aa12.04□□□□□ -0.48
DDX54-205ENST00000548786 CCDC71LQ8N9Z2 235 aa12.04□□□□□ -0.48
DDX54-205ENST00000548786 OR51S1Q8NGJ8 323 aa12.04□□□□□ -0.48
DDX54-205ENST00000548786 LSM10Q969L4 123 aaKnown RBP12.04□□□□□ -0.48
DDX54-205ENST00000548786 TMEM14BQ9NUH8 114 aa12.04□□□□□ -0.48
DDX54-205ENST00000548786 RABL2AQ9UBK7 228 aaPredicted RBP12.04□□□□□ -0.48
DDX54-205ENST00000548786 RABL2BQ9UNT1 228 aa12.04□□□□□ -0.48
DDX54-205ENST00000548786 C14orf166Q9Y224 244 aaKnown RBP12.04□□□□□ -0.48
DDX54-205ENST00000548786 SELENOKQ9Y6D0 94 aa12.04□□□□□ -0.48
DDX54-205ENST00000548786 ANKRD20A5PA0PJZ0 165 aa12.03□□□□□ -0.48
DDX54-205ENST00000548786 IGKV1-5P01602 117 aa12.03□□□□□ -0.48
DDX54-205ENST00000548786 CTSDP07339 412 aaPredicted RBP12.03□□□□□ -0.48
DDX54-205ENST00000548786 CSN3P07498 182 aa12.03□□□□□ -0.48
DDX54-205ENST00000548786 GP9P14770 177 aa12.03□□□□□ -0.48
DDX54-205ENST00000548786 EDN2P20800 178 aa12.03□□□□□ -0.48
DDX54-205ENST00000548786 TATDN3Q17R31 274 aa12.03□□□□□ -0.48
DDX54-205ENST00000548786 RNASE11Q8TAA1 199 aaKnown RBP12.03□□□□□ -0.48
DDX54-205ENST00000548786 TSC22D3Q99576 134 aa12.03□□□□□ -0.48
DDX54-205ENST00000548786 SOSTQ9BQB4 213 aa12.03□□□□□ -0.48
DDX54-205ENST00000548786 FAM212BQ9NTI7 297 aaPredicted RBP12.03□□□□□ -0.48
DDX54-205ENST00000548786 SORL1Q92673 2214 aa12.02□□□□□ -0.48
DDX54-205ENST00000548786 IGHV3-35A0A0C4DH35 117 aa12.02□□□□□ -0.49
DDX54-205ENST00000548786 TEX13DA0A0J9YY54 714 aaPredicted RBP12.02□□□□□ -0.49
DDX54-205ENST00000548786 GGCTO75223 188 aaKnown RBP12.02□□□□□ -0.49
DDX54-205ENST00000548786 FGF2P09038 288 aa12.02□□□□□ -0.49
DDX54-205ENST00000548786 OR5AC1P0C628 307 aa12.02□□□□□ -0.49
DDX54-205ENST00000548786 PTBP1P26599 531 aaKnown RBP eCLIP12.02□□□□□ -0.49
DDX54-205ENST00000548786 GPR183P32249 361 aa12.02□□□□□ -0.49
DDX54-205ENST00000548786 S100A5P33763 92 aa12.02□□□□□ -0.49
DDX54-205ENST00000548786 MFAP2P55001 183 aa12.02□□□□□ -0.49
DDX54-205ENST00000548786 C11orf87Q6NUJ2 197 aa12.02□□□□□ -0.49
DDX54-205ENST00000548786 PRRT1Q99946 306 aa12.02□□□□□ -0.49
DDX54-205ENST00000548786 SRSF8Q9BRL6 282 aaKnown RBP12.02□□□□□ -0.49
DDX54-205ENST00000548786 RTBDNQ9BSG5 229 aaPredicted RBP12.02□□□□□ -0.49
DDX54-205ENST00000548786 THAP7Q9BT49 309 aaPredicted RBP12.02□□□□□ -0.49
DDX54-205ENST00000548786 C5orf66Q9H5L9 145 aa12.02□□□□□ -0.49
DDX54-205ENST00000548786 FKBP11Q9NYL4 201 aa12.02□□□□□ -0.49
DDX54-205ENST00000548786 LSM4Q9Y4Z0 139 aaKnown RBP12.02□□□□□ -0.49
DDX54-205ENST00000548786 V9GYH0 126 aa12.02□□□□□ -0.49
DDX54-205ENST00000548786 IGLV1-51P01701 117 aa12.01□□□□□ -0.49
DDX54-205ENST00000548786 CLEC3BP05452 202 aa12.01□□□□□ -0.49
DDX54-205ENST00000548786 THOC7Q6I9Y2 204 aaKnown RBP12.01□□□□□ -0.49
DDX54-205ENST00000548786 OR5B3Q8NH48 314 aa12.01□□□□□ -0.49
DDX54-205ENST00000548786 CXorf58Q96LI9 332 aa12.01□□□□□ -0.49
DDX54-205ENST00000548786 TMEM56Q96MV1 263 aa12.01□□□□□ -0.49
DDX54-205ENST00000548786 ASCL2Q99929 193 aa12.01□□□□□ -0.49
DDX54-205ENST00000548786 B9D2Q9BPU9 175 aa12.01□□□□□ -0.49
DDX54-205ENST00000548786 PRR13Q9NZ81 148 aa12.01□□□□□ -0.49
DDX54-205ENST00000548786 A0A0G2JRQ6 117 aa12□□□□□ -0.49
DDX54-205ENST00000548786 ZNF320A2RRD8 509 aa12□□□□□ -0.49
DDX54-205ENST00000548786 CYB5BO43169 146 aa12□□□□□ -0.49
DDX54-205ENST00000548786 DCTN2Q13561 401 aaKnown RBP12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms