RNA–Protein interactions for RNA: ENST00000548379.5

PTCH1-216, Transcript of patched 1, humanhuman

TSL 4

Gene PTCH1, Length 548 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-216ENST00000548379 TMEM213A2RRL7 107 aa2.32□□□□□ -2.04
PTCH1-216ENST00000548379 EVPLLA8MZ36 301 aa2.32□□□□□ -2.04
PTCH1-216ENST00000548379 SMLR1H3BR10 107 aa2.32□□□□□ -2.04
PTCH1-216ENST00000548379 KPNA4O00629 521 aaPredicted RBP2.32□□□□□ -2.04
PTCH1-216ENST00000548379 ITGB1BP1O14713 200 aa2.32□□□□□ -2.04
PTCH1-216ENST00000548379 PHYHO14832 338 aa2.32□□□□□ -2.04
PTCH1-216ENST00000548379 SGCEO43556 437 aa2.32□□□□□ -2.04
PTCH1-216ENST00000548379 NDUFA2O43678 99 aa2.32□□□□□ -2.04
PTCH1-216ENST00000548379 CHP2O43745 196 aa2.32□□□□□ -2.04
PTCH1-216ENST00000548379 CCNKO75909 580 aa2.32□□□□□ -2.04
PTCH1-216ENST00000548379 FSTL3O95633 263 aa2.32□□□□□ -2.04
PTCH1-216ENST00000548379 SERPINE1P05121 402 aa2.32□□□□□ -2.04
PTCH1-216ENST00000548379 GLAP06280 429 aa2.32□□□□□ -2.04
PTCH1-216ENST00000548379 BPGMP07738 259 aa2.32□□□□□ -2.04
PTCH1-216ENST00000548379 FBP1P09467 338 aa2.32□□□□□ -2.04
PTCH1-216ENST00000548379 IDO1P14902 403 aa2.32□□□□□ -2.04
PTCH1-216ENST00000548379 PPIBP23284 216 aaKnown RBP2.32□□□□□ -2.04
PTCH1-216ENST00000548379 HTR1DP28221 377 aa2.32□□□□□ -2.04
PTCH1-216ENST00000548379 CD40LGP29965 261 aa2.32□□□□□ -2.04
PTCH1-216ENST00000548379 KDELR2P33947 212 aa2.32□□□□□ -2.04
PTCH1-216ENST00000548379 POLR2IP36954 125 aaKnown RBP2.32□□□□□ -2.04
PTCH1-216ENST00000548379 MPV17P39210 176 aa2.32□□□□□ -2.04
PTCH1-216ENST00000548379 RGS6P49758 472 aa2.32□□□□□ -2.04
PTCH1-216ENST00000548379 KRTAP10-8P60410 259 aa2.32□□□□□ -2.04
PTCH1-216ENST00000548379 UBE2G2P60604 165 aa2.32□□□□□ -2.04
PTCH1-216ENST00000548379 TSPAN5P62079 268 aa2.32□□□□□ -2.04
PTCH1-216ENST00000548379 CDK5Q00535 292 aa2.32□□□□□ -2.04
PTCH1-216ENST00000548379 EMX1Q04741 257 aaPredicted RBP2.32□□□□□ -2.04
PTCH1-216ENST00000548379 FADDQ13158 208 aa2.32□□□□□ -2.04
PTCH1-216ENST00000548379 OR1Q1Q15612 314 aa2.32□□□□□ -2.04
PTCH1-216ENST00000548379 OR8B8Q15620 311 aa2.32□□□□□ -2.04
PTCH1-216ENST00000548379 MPV17L2Q567V2 206 aa2.32□□□□□ -2.04
PTCH1-216ENST00000548379 RNASE13Q5GAN3 156 aaKnown RBP2.32□□□□□ -2.04
PTCH1-216ENST00000548379 DEFB121Q5J5C9 76 aa2.32□□□□□ -2.04
PTCH1-216ENST00000548379 HHATQ5VTY9 493 aa2.32□□□□□ -2.04
PTCH1-216ENST00000548379 OR2T5Q6IEZ7 315 aa2.32□□□□□ -2.04
PTCH1-216ENST00000548379 DHRS4L2Q6PKH6 230 aa2.32□□□□□ -2.04
PTCH1-216ENST00000548379 SLC30A8Q8IWU4 369 aa2.32□□□□□ -2.04
PTCH1-216ENST00000548379 ZNF101Q8IZC7 436 aa2.32□□□□□ -2.04
PTCH1-216ENST00000548379 LGI3Q8N145 548 aa2.32□□□□□ -2.04
PTCH1-216ENST00000548379 NECAP1Q8NC96 275 aa2.32□□□□□ -2.04
PTCH1-216ENST00000548379 OR4C13Q8NGP0 309 aa2.32□□□□□ -2.04
PTCH1-216ENST00000548379 OR13G1Q8NGZ3 307 aa2.32□□□□□ -2.04
PTCH1-216ENST00000548379 OR2T29Q8NH02 315 aa2.32□□□□□ -2.04
PTCH1-216ENST00000548379 CMBLQ96DG6 245 aa2.32□□□□□ -2.04
PTCH1-216ENST00000548379 OR2V2Q96R30 315 aa2.32□□□□□ -2.04
PTCH1-216ENST00000548379 GGTLC1Q9BX51 225 aa2.32□□□□□ -2.04
PTCH1-216ENST00000548379 SRRQ9GZT4 340 aa2.32□□□□□ -2.04
PTCH1-216ENST00000548379 C16orf95Q9H693 158 aa2.32□□□□□ -2.04
PTCH1-216ENST00000548379 BCL2L10Q9HD36 194 aa2.32□□□□□ -2.04
PTCH1-216ENST00000548379 C8orf17Q9NRJ1 99 aa2.32□□□□□ -2.04
PTCH1-216ENST00000548379 INIPQ9NRY2 104 aa2.32□□□□□ -2.04
PTCH1-216ENST00000548379 RHBDL2Q9NX52 303 aa2.32□□□□□ -2.04
PTCH1-216ENST00000548379 PYCARDQ9ULZ3 195 aa2.32□□□□□ -2.04
PTCH1-216ENST00000548379 ANGPT4Q9Y264 503 aa2.32□□□□□ -2.04
PTCH1-216ENST00000548379 ZNF257Q9Y2Q1 563 aa2.32□□□□□ -2.04
PTCH1-216ENST00000548379 NOP16Q9Y3C1 178 aaKnown RBP2.32□□□□□ -2.04
PTCH1-216ENST00000548379 USH1CQ9Y6N9 552 aa2.32□□□□□ -2.04
PTCH1-216ENST00000548379 MAP1AP78559 2803 aaPredicted RBP2.32□□□□□ -2.04
PTCH1-216ENST00000548379 SEC16AO15027 2179 aa2.32□□□□□ -2.04
PTCH1-216ENST00000548379 INTS1Q8N201 2190 aaKnown RBP2.32□□□□□ -2.04
PTCH1-216ENST00000548379 KIAA1549Q9HCM3 1950 aa2.31□□□□□ -2.04
PTCH1-216ENST00000548379 ANK3Q12955 4377 aaKnown RBP2.31□□□□□ -2.04
PTCH1-216ENST00000548379 CHD3Q12873 2000 aaKnown RBP2.31□□□□□ -2.04
PTCH1-216ENST00000548379 MDC1Q14676 2089 aaKnown RBP2.31□□□□□ -2.04
PTCH1-216ENST00000548379 ANKRD12Q6UB98 2062 aa2.31□□□□□ -2.04
PTCH1-216ENST00000548379 IGKV1D-42A0A075B6H8 117 aa2.31□□□□□ -2.04
PTCH1-216ENST00000548379 IGKV1-27A0A075B6S5 117 aa2.31□□□□□ -2.04
PTCH1-216ENST00000548379 SMIM26A0A096LP01 95 aa2.31□□□□□ -2.04
PTCH1-216ENST00000548379 TRAV38-1A0A0B4J264 116 aa2.31□□□□□ -2.04
PTCH1-216ENST00000548379 CENPVL3A0A0U1RRI6 287 aa2.31□□□□□ -2.04
PTCH1-216ENST00000548379 TRAPPC13A5PLN9 417 aa2.31□□□□□ -2.04
PTCH1-216ENST00000548379 CPSF4LA6NMK7 179 aaKnown RBP2.31□□□□□ -2.04
PTCH1-216ENST00000548379 COLCA2A8K830 154 aa2.31□□□□□ -2.04
PTCH1-216ENST00000548379 TNFRSF11BO00300 401 aa2.31□□□□□ -2.04
PTCH1-216ENST00000548379 ZNF593O00488 134 aaPredicted RBP2.31□□□□□ -2.04
PTCH1-216ENST00000548379 TAAR5O14804 337 aa2.31□□□□□ -2.04
PTCH1-216ENST00000548379 BIRC5O15392 142 aa2.31□□□□□ -2.04
PTCH1-216ENST00000548379 PTTG1O95997 202 aa2.31□□□□□ -2.04
PTCH1-216ENST00000548379 CYB5R3P00387 301 aaPredicted RBP2.31□□□□□ -2.04
PTCH1-216ENST00000548379 IGHV1-69P01742 117 aa2.31□□□□□ -2.04
PTCH1-216ENST00000548379 SHBGP04278 402 aa2.31□□□□□ -2.04
PTCH1-216ENST00000548379 CST2P09228 141 aa2.31□□□□□ -2.04
PTCH1-216ENST00000548379 MMP7P09237 267 aaPredicted RBP2.31□□□□□ -2.04
PTCH1-216ENST00000548379 OR5AL1P0C617 328 aa2.31□□□□□ -2.04
PTCH1-216ENST00000548379 COX5BP10606 129 aa2.31□□□□□ -2.04
PTCH1-216ENST00000548379 CDKN2CP42773 168 aa2.31□□□□□ -2.04
PTCH1-216ENST00000548379 TAS2R31P59538 309 aa2.31□□□□□ -2.04
PTCH1-216ENST00000548379 CDK6Q00534 326 aa2.31□□□□□ -2.04
PTCH1-216ENST00000548379 PSG4Q00888 419 aa2.31□□□□□ -2.04
PTCH1-216ENST00000548379 ZNF816Q0VGE8 651 aaPredicted RBP2.31□□□□□ -2.04
PTCH1-216ENST00000548379 TPBGQ13641 420 aa2.31□□□□□ -2.04
PTCH1-216ENST00000548379 ZNF181Q2M3W8 571 aa2.31□□□□□ -2.04
PTCH1-216ENST00000548379 ZNF404Q494X3 552 aa2.31□□□□□ -2.04
PTCH1-216ENST00000548379 C10orf128Q5T292 105 aa2.31□□□□□ -2.04
PTCH1-216ENST00000548379 KPRPQ5T749 579 aaPredicted RBP2.31□□□□□ -2.04
PTCH1-216ENST00000548379 FAM27D1Q5T7N8 215 aa2.31□□□□□ -2.04
PTCH1-216ENST00000548379 FAM27BQ5VT28 67 aa2.31□□□□□ -2.04
PTCH1-216ENST00000548379 AHSA2Q719I0 299 aa2.31□□□□□ -2.04
PTCH1-216ENST00000548379 FAM19A1Q7Z5A9 133 aa2.31□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms