RNA–Protein interactions for RNA: ENST00000546816.5

CCDC38-204, Transcript of coiled-coil domain containing 38, humanhuman

TSL 2

Gene CCDC38, Length 465 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-204ENST00000546816 KIF24Q5T7B8 1368 aa0.65□□□□□ -2.31
CCDC38-204ENST00000546816 MAP3K5Q99683 1374 aa0.65□□□□□ -2.31
CCDC38-204ENST00000546816 PTPRBP23467 1997 aa0.65□□□□□ -2.31
CCDC38-204ENST00000546816 C9orf84Q5VXU9 1444 aa0.64□□□□□ -2.31
CCDC38-204ENST00000546816 IGKV3-7A0A075B6H7 116 aa0.64□□□□□ -2.31
CCDC38-204ENST00000546816 INMT-MINDY4F8WBC2 141 aa0.64□□□□□ -2.31
CCDC38-204ENST00000546816 NOS1APO75052 506 aaPredicted RBP0.64□□□□□ -2.31
CCDC38-204ENST00000546816 IGHV3-7P01780 117 aa0.64□□□□□ -2.31
CCDC38-204ENST00000546816 TPM3P06753 285 aa0.64□□□□□ -2.31
CCDC38-204ENST00000546816 UCHL3P15374 230 aa0.64□□□□□ -2.31
CCDC38-204ENST00000546816 CCR7P32248 378 aa0.64□□□□□ -2.31
CCDC38-204ENST00000546816 FXYD2P54710 66 aa0.64□□□□□ -2.31
CCDC38-204ENST00000546816 TPM4P67936 248 aa0.64□□□□□ -2.31
CCDC38-204ENST00000546816 RPL18Q07020 188 aaKnown RBP0.64□□□□□ -2.31
CCDC38-204ENST00000546816 CD200R1LQ6Q8B3 271 aa0.64□□□□□ -2.31
CCDC38-204ENST00000546816 DCXRQ7Z4W1 244 aa0.64□□□□□ -2.31
CCDC38-204ENST00000546816 DHFR2Q86XF0 187 aa0.64□□□□□ -2.31
CCDC38-204ENST00000546816 C15orf53Q8NAA6 179 aa0.64□□□□□ -2.31
CCDC38-204ENST00000546816 ZNF439Q8NDP4 499 aa0.64□□□□□ -2.31
CCDC38-204ENST00000546816 OPTNQ96CV9 577 aa0.64□□□□□ -2.31
CCDC38-204ENST00000546816 CNBD2Q96M20 576 aa0.64□□□□□ -2.31
CCDC38-204ENST00000546816 ERMAPQ96PL5 475 aaPredicted RBP0.64□□□□□ -2.31
CCDC38-204ENST00000546816 ADAT1Q9BUB4 502 aaKnown RBP0.64□□□□□ -2.31
CCDC38-204ENST00000546816 OR51I1Q9H343 314 aa0.64□□□□□ -2.31
CCDC38-204ENST00000546816 XPNPEP1Q9NQW7 623 aa0.64□□□□□ -2.31
CCDC38-204ENST00000546816 TONSLQ96HA7 1378 aa0.64□□□□□ -2.31
CCDC38-204ENST00000546816 MUC5BQ9HC84 5762 aaPredicted RBP0.64□□□□□ -2.31
CCDC38-204ENST00000546816 MYH11P35749 1972 aa0.63□□□□□ -2.31
CCDC38-204ENST00000546816 PCDH15Q96QU1 1955 aa0.63□□□□□ -2.31
CCDC38-204ENST00000546816 GLI3P10071 1580 aa0.63□□□□□ -2.31
CCDC38-204ENST00000546816 EIF4G1Q04637 1599 aaKnown RBP0.63□□□□□ -2.31
CCDC38-204ENST00000546816 ACOX3O15254 700 aa0.63□□□□□ -2.31
CCDC38-204ENST00000546816 ISG15P05161 165 aa0.63□□□□□ -2.31
CCDC38-204ENST00000546816 KCNE1P15382 129 aa0.63□□□□□ -2.31
CCDC38-204ENST00000546816 NFYAP23511 347 aaPredicted RBP0.63□□□□□ -2.31
CCDC38-204ENST00000546816 ZNF80P51504 273 aaPredicted RBP0.63□□□□□ -2.31
CCDC38-204ENST00000546816 SYPL2Q5VXT5 272 aa0.63□□□□□ -2.31
CCDC38-204ENST00000546816 GLT8D1Q68CQ7 371 aa0.63□□□□□ -2.31
CCDC38-204ENST00000546816 ALKAL1Q6UXT8 129 aa0.63□□□□□ -2.31
CCDC38-204ENST00000546816 RPS19BP1Q86WX3 136 aaKnown RBP0.63□□□□□ -2.31
CCDC38-204ENST00000546816 C10orf67Q8IYJ2 551 aa0.63□□□□□ -2.31
CCDC38-204ENST00000546816 C1orf158Q8N1D5 194 aa0.63□□□□□ -2.31
CCDC38-204ENST00000546816 OR8B3Q8NGG8 313 aa0.63□□□□□ -2.31
CCDC38-204ENST00000546816 EFCAB1Q9HAE3 211 aa0.63□□□□□ -2.31
CCDC38-204ENST00000546816 NKIRAS1Q9NYS0 192 aa0.63□□□□□ -2.31
CCDC38-204ENST00000546816 IL36BQ9NZH7 164 aa0.63□□□□□ -2.31
CCDC38-204ENST00000546816 EVC2Q86UK5 1308 aa0.63□□□□□ -2.31
CCDC38-204ENST00000546816 IRGMA1A4Y4 181 aa0.62□□□□□ -2.31
CCDC38-204ENST00000546816 GGT3PA6NGU5 568 aa0.62□□□□□ -2.31
CCDC38-204ENST00000546816 SLC22A1O15245 554 aa0.62□□□□□ -2.31
CCDC38-204ENST00000546816 CLPSP04118 112 aa0.62□□□□□ -2.31
CCDC38-204ENST00000546816 PRM2P04554 102 aa0.62□□□□□ -2.31
CCDC38-204ENST00000546816 OR5G3P0C626 314 aa0.62□□□□□ -2.31
CCDC38-204ENST00000546816 SUPT4H1P63272 117 aaKnown RBP0.62□□□□□ -2.31
CCDC38-204ENST00000546816 CTAG1AP78358 180 aa0.62□□□□□ -2.31
CCDC38-204ENST00000546816 CCL20P78556 96 aa0.62□□□□□ -2.31
CCDC38-204ENST00000546816 PLCXD2Q0VAA5 305 aa0.62□□□□□ -2.31
CCDC38-204ENST00000546816 COTL1Q14019 142 aa0.62□□□□□ -2.31
CCDC38-204ENST00000546816 ZNF345Q14585 488 aa0.62□□□□□ -2.31
CCDC38-204ENST00000546816 CDK5R1Q15078 307 aa0.62□□□□□ -2.31
CCDC38-204ENST00000546816 NDUFA5Q16718 116 aa0.62□□□□□ -2.31
CCDC38-204ENST00000546816 GUK1Q16774 197 aa0.62□□□□□ -2.31
CCDC38-204ENST00000546816 COQ5Q5HYK3 327 aa0.62□□□□□ -2.31
CCDC38-204ENST00000546816 CDKL4Q5MAI5 379 aa0.62□□□□□ -2.31
CCDC38-204ENST00000546816 IBA57Q5T440 356 aaKnown RBP0.62□□□□□ -2.31
CCDC38-204ENST00000546816 PTH2Q96A98 100 aa0.62□□□□□ -2.31
CCDC38-204ENST00000546816 CISHQ9NSE2 258 aa0.62□□□□□ -2.31
CCDC38-204ENST00000546816 BAIAP2Q9UQB8 552 aa0.62□□□□□ -2.31
CCDC38-204ENST00000546816 SETD5Q9C0A6 1442 aa0.62□□□□□ -2.31
CCDC38-204ENST00000546816 ZNF469Q96JG9 3925 aaPredicted RBP0.61□□□□□ -2.31
CCDC38-204ENST00000546816 TRBV20OR9-2A0A075B6H5 130 aa0.61□□□□□ -2.31
CCDC38-204ENST00000546816 A0A0J9YY10 115 aa0.61□□□□□ -2.31
CCDC38-204ENST00000546816 A0A1B0GV50 99 aa0.61□□□□□ -2.31
CCDC38-204ENST00000546816 A0A1B0GX78 115 aa0.61□□□□□ -2.31
CCDC38-204ENST00000546816 FABP5P3A8MUU1 101 aa0.61□□□□□ -2.31
CCDC38-204ENST00000546816 SDCBPO00560 298 aaPredicted RBP0.61□□□□□ -2.31
CCDC38-204ENST00000546816 TGOLN2O43493 480 aa0.61□□□□□ -2.31
CCDC38-204ENST00000546816 METTL15P1P0C7V9 234 aa0.61□□□□□ -2.31
CCDC38-204ENST00000546816 RNASE3P12724 160 aaKnown RBP0.61□□□□□ -2.31
CCDC38-204ENST00000546816 AP2S1P53680 142 aaPredicted RBP0.61□□□□□ -2.31
CCDC38-204ENST00000546816 TCL1AP56279 114 aa0.61□□□□□ -2.31
CCDC38-204ENST00000546816 MAGOHP61326 146 aaKnown RBP0.61□□□□□ -2.31
CCDC38-204ENST00000546816 PMAIP1Q13794 54 aa0.61□□□□□ -2.31
CCDC38-204ENST00000546816 KISS1Q15726 138 aa0.61□□□□□ -2.31
CCDC38-204ENST00000546816 C10orf55Q5SWW7 151 aa0.61□□□□□ -2.31
CCDC38-204ENST00000546816 TMEM86BQ8N661 226 aa0.61□□□□□ -2.31
CCDC38-204ENST00000546816 OR5B17Q8NGF7 314 aa0.61□□□□□ -2.31
CCDC38-204ENST00000546816 OR2T4Q8NH00 348 aa0.61□□□□□ -2.31
CCDC38-204ENST00000546816 YIPF3Q9GZM5 350 aa0.61□□□□□ -2.31
CCDC38-204ENST00000546816 FREM1Q5H8C1 2179 aa0.61□□□□□ -2.31
CCDC38-204ENST00000546816 INTS1Q8N201 2190 aaKnown RBP0.6□□□□□ -2.31
CCDC38-204ENST00000546816 BAZ2BQ9UIF8 2168 aaKnown RBP0.6□□□□□ -2.31
CCDC38-204ENST00000546816 GREB1Q4ZG55 1949 aa0.6□□□□□ -2.31
CCDC38-204ENST00000546816 HCRTO43612 131 aa0.6□□□□□ -2.31
CCDC38-204ENST00000546816 DCTN3O75935 186 aa0.6□□□□□ -2.31
CCDC38-204ENST00000546816 PMP2P02689 132 aa0.6□□□□□ -2.31
CCDC38-204ENST00000546816 RPS4Y1P22090 263 aaKnown RBP0.6□□□□□ -2.31
CCDC38-204ENST00000546816 SURF2Q15527 256 aaPredicted RBP0.6□□□□□ -2.31
CCDC38-204ENST00000546816 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP0.6□□□□□ -2.31
CCDC38-204ENST00000546816 RASSF5Q8WWW0 418 aa0.6□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms