RNA–Protein interactions for RNA: ENST00000546378.1

HOXC11-202, Transcript of homeobox C11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC11, Length 3,261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC11-202ENST00000546378 ARL2-SNX15V9GYD0 113 aa12.18□□□□□ -0.46
HOXC11-202ENST00000546378 MUC21A0A0G2JKD1 596 aa12.17□□□□□ -0.46
HOXC11-202ENST00000546378 MUC21A0A140T8X8 626 aa12.17□□□□□ -0.46
HOXC11-202ENST00000546378 WT1P19544 449 aaPredicted RBP12.17□□□□□ -0.46
HOXC11-202ENST00000546378 ARR3P36575 388 aa12.17□□□□□ -0.46
HOXC11-202ENST00000546378 CENPWQ5EE01 88 aa12.17□□□□□ -0.46
HOXC11-202ENST00000546378 MUC21Q5SSG8 566 aa12.17□□□□□ -0.46
HOXC11-202ENST00000546378 CISD2Q8N5K1 135 aaKnown RBP12.17□□□□□ -0.46
HOXC11-202ENST00000546378 ZNF645Q8N7E2 425 aa12.17□□□□□ -0.46
HOXC11-202ENST00000546378 STPG3Q8N7X2 389 aa12.17□□□□□ -0.46
HOXC11-202ENST00000546378 SLC24A4Q8NFF2 622 aa12.17□□□□□ -0.46
HOXC11-202ENST00000546378 OR2D3Q8NGH3 330 aa12.17□□□□□ -0.46
HOXC11-202ENST00000546378 KLF14Q8TD94 323 aaPredicted RBP12.17□□□□□ -0.46
HOXC11-202ENST00000546378 ANAPC16Q96DE5 110 aa12.17□□□□□ -0.46
HOXC11-202ENST00000546378 TMEM68Q96MH6 324 aa12.17□□□□□ -0.46
HOXC11-202ENST00000546378 GNB4Q9HAV0 340 aa12.17□□□□□ -0.46
HOXC11-202ENST00000546378 ZNF355PQ9NSJ1 428 aa12.17□□□□□ -0.46
HOXC11-202ENST00000546378 PIEZO1Q92508 2521 aa12.17□□□□□ -0.46
HOXC11-202ENST00000546378 IGHV3-72A0A0B4J1Y9 119 aa12.17□□□□□ -0.46
HOXC11-202ENST00000546378 CYC1P08574 325 aa12.17□□□□□ -0.46
HOXC11-202ENST00000546378 CLDN18P56856 261 aa12.17□□□□□ -0.46
HOXC11-202ENST00000546378 FOXF2Q12947 444 aa12.17□□□□□ -0.46
HOXC11-202ENST00000546378 MRPL49Q13405 166 aaKnown RBP12.17□□□□□ -0.46
HOXC11-202ENST00000546378 S1PR3Q99500 378 aa12.17□□□□□ -0.46
HOXC11-202ENST00000546378 FBXL7Q9UJT9 491 aa12.17□□□□□ -0.46
HOXC11-202ENST00000546378 CHRNB4P30926 498 aa12.17□□□□□ -0.46
HOXC11-202ENST00000546378 FOXC1Q12948 553 aa12.17□□□□□ -0.46
HOXC11-202ENST00000546378 TMEM183BQ1AE95 376 aa12.17□□□□□ -0.46
HOXC11-202ENST00000546378 TMEM14EPQ6UXP3 125 aa12.17□□□□□ -0.46
HOXC11-202ENST00000546378 ZNF586Q9NXT0 402 aa12.17□□□□□ -0.46
HOXC11-202ENST00000546378 ELOVL5Q9NYP7 299 aa12.17□□□□□ -0.46
HOXC11-202ENST00000546378 OR5B21A6NL26 309 aa12.16□□□□□ -0.46
HOXC11-202ENST00000546378 MAS1LP35410 378 aa12.16□□□□□ -0.46
HOXC11-202ENST00000546378 RAB7AP51149 207 aa12.16□□□□□ -0.46
HOXC11-202ENST00000546378 ZNF497Q6ZNH5 498 aa12.16□□□□□ -0.46
HOXC11-202ENST00000546378 FOXL2NBQ6ZUU3 175 aa12.16□□□□□ -0.46
HOXC11-202ENST00000546378 C15orf62A8K5M9 175 aa12.16□□□□□ -0.46
HOXC11-202ENST00000546378 TMEM250H0YL14 139 aa12.16□□□□□ -0.46
HOXC11-202ENST00000546378 RNFT1Q5M7Z0 435 aa12.16□□□□□ -0.46
HOXC11-202ENST00000546378 RIPPLY2Q5TAB7 128 aa12.16□□□□□ -0.46
HOXC11-202ENST00000546378 TREML4Q6UXN2 200 aa12.16□□□□□ -0.46
HOXC11-202ENST00000546378 OR8G5Q8NG78 346 aa12.16□□□□□ -0.46
HOXC11-202ENST00000546378 OR10W1Q8NGF6 305 aa12.16□□□□□ -0.46
HOXC11-202ENST00000546378 BORCS7Q96B45 105 aa12.16□□□□□ -0.46
HOXC11-202ENST00000546378 NAA38Q9BRA0 125 aaKnown RBP12.16□□□□□ -0.46
HOXC11-202ENST00000546378 CLEC5AQ9NY25 188 aa12.16□□□□□ -0.46
HOXC11-202ENST00000546378 ZNF138P52744 262 aa12.15□□□□□ -0.46
HOXC11-202ENST00000546378 BRWD1-AS2P59051 145 aa12.15□□□□□ -0.46
HOXC11-202ENST00000546378 VAMP3Q15836 100 aa12.15□□□□□ -0.46
HOXC11-202ENST00000546378 SPRNQ5BIV9 151 aa12.15□□□□□ -0.46
HOXC11-202ENST00000546378 VWA1Q6PCB0 445 aa12.15□□□□□ -0.46
HOXC11-202ENST00000546378 C19orf35Q6ZS72 473 aa12.15□□□□□ -0.46
HOXC11-202ENST00000546378 LSM10Q969L4 123 aaKnown RBP12.15□□□□□ -0.46
HOXC11-202ENST00000546378 COQ2Q96H96 371 aa12.15□□□□□ -0.46
HOXC11-202ENST00000546378 NEU1Q99519 415 aa12.15□□□□□ -0.46
HOXC11-202ENST00000546378 MGST2Q99735 147 aa12.15□□□□□ -0.46
HOXC11-202ENST00000546378 FAM173AQ9BQD7 235 aa12.15□□□□□ -0.46
HOXC11-202ENST00000546378 LPAR2Q9HBW0 351 aa12.15□□□□□ -0.46
HOXC11-202ENST00000546378 MPC1Q9Y5U8 109 aa12.15□□□□□ -0.46
HOXC11-202ENST00000546378 TRAV1-1A0A0B4J248 108 aa12.15□□□□□ -0.46
HOXC11-202ENST00000546378 HELTA6NFD8 242 aa12.15□□□□□ -0.46
HOXC11-202ENST00000546378 K7EN84 100 aa12.15□□□□□ -0.46
HOXC11-202ENST00000546378 KLK10O43240 276 aa12.15□□□□□ -0.46
HOXC11-202ENST00000546378 MFAP2P55001 183 aa12.15□□□□□ -0.46
HOXC11-202ENST00000546378 GFRA1P56159 465 aa12.15□□□□□ -0.46
HOXC11-202ENST00000546378 SOX8P57073 446 aa12.15□□□□□ -0.46
HOXC11-202ENST00000546378 MOGAT3Q86VF5 341 aa12.15□□□□□ -0.46
HOXC11-202ENST00000546378 TMEM140Q9NV12 185 aa12.15□□□□□ -0.46
HOXC11-202ENST00000546378 MALRD1Q5VYJ5 2156 aa12.15□□□□□ -0.46
HOXC11-202ENST00000546378 HSBP1O75506 76 aa12.15□□□□□ -0.46
HOXC11-202ENST00000546378 PYYP10082 97 aa12.15□□□□□ -0.46
HOXC11-202ENST00000546378 CCKARP32238 428 aa12.15□□□□□ -0.46
HOXC11-202ENST00000546378 RANP62826 216 aaKnown RBP12.15□□□□□ -0.46
HOXC11-202ENST00000546378 LEMD1Q68G75 181 aa12.15□□□□□ -0.46
HOXC11-202ENST00000546378 GNG5P63218 68 aa12.14□□□□□ -0.47
HOXC11-202ENST00000546378 FDCSPQ8NFU4 85 aa12.14□□□□□ -0.47
HOXC11-202ENST00000546378 IL6RP08887 468 aaPredicted RBP12.14□□□□□ -0.47
HOXC11-202ENST00000546378 ORM2P19652 201 aa12.14□□□□□ -0.47
HOXC11-202ENST00000546378 RPEL1Q2QD12 228 aa12.14□□□□□ -0.47
HOXC11-202ENST00000546378 TIGITQ495A1 244 aa12.14□□□□□ -0.47
HOXC11-202ENST00000546378 OR9G1Q8NH87 305 aa12.14□□□□□ -0.47
HOXC11-202ENST00000546378 FAM168AQ92567 244 aa12.14□□□□□ -0.47
HOXC11-202ENST00000546378 HSPB7Q9UBY9 170 aa12.14□□□□□ -0.47
HOXC11-202ENST00000546378 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.14□□□□□ -0.47
HOXC11-202ENST00000546378 ENSAO43768 121 aaKnown RBP12.13□□□□□ -0.47
HOXC11-202ENST00000546378 CA2P00918 260 aa12.13□□□□□ -0.47
HOXC11-202ENST00000546378 RPL8P62917 257 aaKnown RBP12.13□□□□□ -0.47
HOXC11-202ENST00000546378 C10orf55Q5SWW7 151 aa12.13□□□□□ -0.47
HOXC11-202ENST00000546378 NRN1Q9NPD7 142 aa12.13□□□□□ -0.47
HOXC11-202ENST00000546378 SLC35D1Q9NTN3 355 aa12.13□□□□□ -0.47
HOXC11-202ENST00000546378 MLNRO43193 412 aa12.13□□□□□ -0.47
HOXC11-202ENST00000546378 DLEU1O43261 78 aa12.13□□□□□ -0.47
HOXC11-202ENST00000546378 GCHFRP30047 84 aa12.13□□□□□ -0.47
HOXC11-202ENST00000546378 C1orf194Q5T5A4 169 aa12.13□□□□□ -0.47
HOXC11-202ENST00000546378 FBXW9Q5XUX1 488 aa12.13□□□□□ -0.47
HOXC11-202ENST00000546378 TGIF2LYQ8IUE0 185 aa12.13□□□□□ -0.47
HOXC11-202ENST00000546378 STPG4Q8N801 248 aa12.13□□□□□ -0.47
HOXC11-202ENST00000546378 IGFBPL1Q8WX77 278 aa12.13□□□□□ -0.47
HOXC11-202ENST00000546378 NANOS1Q8WY41 292 aaKnown RBP12.13□□□□□ -0.47
HOXC11-202ENST00000546378 SPSB4Q96A44 273 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms