RNA–Protein interactions for RNA: ENST00000545738.6

LIMS2-217, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 5 BASIC

Gene LIMS2, Length 1,730 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-217ENST00000545738 KRTAP21-3Q3LHN1 58 aa12.74□□□□□ -0.37
LIMS2-217ENST00000545738 AARDQ4LEZ3 155 aa12.74□□□□□ -0.37
LIMS2-217ENST00000545738 UNQ5815/PRO19632Q6UWF5 114 aa12.74□□□□□ -0.37
LIMS2-217ENST00000545738 RNASE11Q8TAA1 199 aaKnown RBP12.74□□□□□ -0.37
LIMS2-217ENST00000545738 KLK15Q9H2R5 256 aa12.74□□□□□ -0.37
LIMS2-217ENST00000545738 A0A1W2PN81 502 aa12.73□□□□□ -0.37
LIMS2-217ENST00000545738 PSMB11A5LHX3 300 aa12.73□□□□□ -0.37
LIMS2-217ENST00000545738 CREBL2O60519 120 aaPredicted RBP12.73□□□□□ -0.37
LIMS2-217ENST00000545738 REG1AP05451 166 aa12.73□□□□□ -0.37
LIMS2-217ENST00000545738 CHRNA7P36544 502 aa12.73□□□□□ -0.37
LIMS2-217ENST00000545738 DEFA5Q01523 94 aa12.73□□□□□ -0.37
LIMS2-217ENST00000545738 TATDN3Q17R31 274 aa12.73□□□□□ -0.37
LIMS2-217ENST00000545738 AKIRIN2Q53H80 203 aa12.73□□□□□ -0.37
LIMS2-217ENST00000545738 ZNF429Q86V71 674 aa12.73□□□□□ -0.37
LIMS2-217ENST00000545738 OR5AU1Q8NGC0 362 aa12.73□□□□□ -0.37
LIMS2-217ENST00000545738 OR4A16Q8NH70 328 aa12.73□□□□□ -0.37
LIMS2-217ENST00000545738 CHPT1Q8WUD6 406 aa12.73□□□□□ -0.37
LIMS2-217ENST00000545738 COMMD5Q9GZQ3 224 aa12.73□□□□□ -0.37
LIMS2-217ENST00000545738 PRNDQ9UKY0 176 aa12.73□□□□□ -0.37
LIMS2-217ENST00000545738 A0A1B0GUS0 222 aa12.72□□□□□ -0.37
LIMS2-217ENST00000545738 PITX3O75364 302 aa12.72□□□□□ -0.37
LIMS2-217ENST00000545738 SNAPC5O75971 98 aa12.72□□□□□ -0.37
LIMS2-217ENST00000545738 IGLV1-40P01703 118 aa12.72□□□□□ -0.37
LIMS2-217ENST00000545738 PRH1P02810 166 aa12.72□□□□□ -0.37
LIMS2-217ENST00000545738 CENPVQ7Z7K6 275 aaPredicted RBP12.72□□□□□ -0.37
LIMS2-217ENST00000545738 OR5T1Q8NG75 326 aa12.72□□□□□ -0.37
LIMS2-217ENST00000545738 COQ8AQ8NI60 647 aa12.72□□□□□ -0.37
LIMS2-217ENST00000545738 OR10C1Q96KK4 312 aa12.72□□□□□ -0.37
LIMS2-217ENST00000545738 PHB2Q99623 299 aa12.72□□□□□ -0.37
LIMS2-217ENST00000545738 DMRT1Q9Y5R6 373 aa12.72□□□□□ -0.37
LIMS2-217ENST00000545738 DUXBA0A1W2PPF3 345 aa12.71□□□□□ -0.37
LIMS2-217ENST00000545738 ATG12O94817 140 aa12.71□□□□□ -0.37
LIMS2-217ENST00000545738 IGHG4P01861 327 aa12.71□□□□□ -0.37
LIMS2-217ENST00000545738 PSMB8P28062 276 aa12.71□□□□□ -0.37
LIMS2-217ENST00000545738 SMUG1Q53HV7 270 aa12.71□□□□□ -0.37
LIMS2-217ENST00000545738 C12orf45Q8N5I9 185 aaPredicted RBP12.71□□□□□ -0.37
LIMS2-217ENST00000545738 UXS1Q8NBZ7 420 aa12.71□□□□□ -0.37
LIMS2-217ENST00000545738 OR1L8Q8NGR8 309 aa12.71□□□□□ -0.37
LIMS2-217ENST00000545738 OR5B3Q8NH48 314 aa12.71□□□□□ -0.37
LIMS2-217ENST00000545738 HINT2Q9BX68 163 aa12.71□□□□□ -0.37
LIMS2-217ENST00000545738 C7orf66A4D0T2 115 aa12.71□□□□□ -0.38
LIMS2-217ENST00000545738 HSPE1P61604 102 aaKnown RBP12.71□□□□□ -0.38
LIMS2-217ENST00000545738 C18orf65Q6ZTR6 163 aa12.71□□□□□ -0.38
LIMS2-217ENST00000545738 SPIN2AQ99865 258 aa12.71□□□□□ -0.38
LIMS2-217ENST00000545738 CITED1Q99966 193 aa12.71□□□□□ -0.38
LIMS2-217ENST00000545738 SPIN2BQ9BPZ2 258 aa12.71□□□□□ -0.38
LIMS2-217ENST00000545738 PRELID1Q9Y255 219 aa12.71□□□□□ -0.38
LIMS2-217ENST00000545738 ZNF257Q9Y2Q1 563 aa12.71□□□□□ -0.38
LIMS2-217ENST00000545738 TMED3Q9Y3Q3 217 aa12.71□□□□□ -0.38
LIMS2-217ENST00000545738 ALG5Q9Y673 324 aa12.71□□□□□ -0.38
LIMS2-217ENST00000545738 BOLA2-SMG1P6H3BVE0 249 aa12.7□□□□□ -0.38
LIMS2-217ENST00000545738 RPLP1P05386 114 aaKnown RBP12.7□□□□□ -0.38
LIMS2-217ENST00000545738 SULT1A3P0DMM9 295 aa12.7□□□□□ -0.38
LIMS2-217ENST00000545738 SULT1A4P0DMN0 295 aa12.7□□□□□ -0.38
LIMS2-217ENST00000545738 PRCDQ00LT1 54 aa12.7□□□□□ -0.38
LIMS2-217ENST00000545738 KIAA0141Q14154 515 aaPredicted RBP12.7□□□□□ -0.38
LIMS2-217ENST00000545738 SMCO1Q147U7 214 aa12.7□□□□□ -0.38
LIMS2-217ENST00000545738 CXorf66Q5JRM2 361 aaPredicted RBP12.7□□□□□ -0.38
LIMS2-217ENST00000545738 CITED2Q99967 270 aaPredicted RBP12.7□□□□□ -0.38
LIMS2-217ENST00000545738 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.7□□□□□ -0.38
LIMS2-217ENST00000545738 COA4Q9NYJ1 87 aa12.7□□□□□ -0.38
LIMS2-217ENST00000545738 ADARB2-AS1A8MUL3 147 aa12.69□□□□□ -0.38
LIMS2-217ENST00000545738 SNRPGP15A8MWD9 76 aa12.69□□□□□ -0.38
LIMS2-217ENST00000545738 PRAF2O60831 178 aa12.69□□□□□ -0.38
LIMS2-217ENST00000545738 DHFRP00374 187 aa12.69□□□□□ -0.38
LIMS2-217ENST00000545738 TRAPPC2P0DI81 140 aa12.69□□□□□ -0.38
LIMS2-217ENST00000545738 TRAPPC2BP0DI82 140 aa12.69□□□□□ -0.38
LIMS2-217ENST00000545738 CTRB1P17538 263 aa12.69□□□□□ -0.38
LIMS2-217ENST00000545738 MFAP2P55001 183 aa12.69□□□□□ -0.38
LIMS2-217ENST00000545738 CTRB2Q6GPI1 263 aa12.69□□□□□ -0.38
LIMS2-217ENST00000545738 TTC9CQ8N5M4 171 aa12.69□□□□□ -0.38
LIMS2-217ENST00000545738 WDR89Q96FK6 387 aaPredicted RBP12.69□□□□□ -0.38
LIMS2-217ENST00000545738 PKD1L1Q8TDX9 2849 aa12.69□□□□□ -0.38
LIMS2-217ENST00000545738 A0A1B0GU03 582 aa12.68□□□□□ -0.38
LIMS2-217ENST00000545738 FBXO24O75426 580 aa12.68□□□□□ -0.38
LIMS2-217ENST00000545738 CD83Q01151 205 aa12.68□□□□□ -0.38
LIMS2-217ENST00000545738 PDLIM3Q53GG5 364 aaPredicted RBP12.68□□□□□ -0.38
LIMS2-217ENST00000545738 RNF152Q8N8N0 203 aa12.68□□□□□ -0.38
LIMS2-217ENST00000545738 FAM110DQ8TAY7 271 aaPredicted RBP12.68□□□□□ -0.38
LIMS2-217ENST00000545738 MYOZ3Q8TDC0 251 aa12.68□□□□□ -0.38
LIMS2-217ENST00000545738 MS4A10Q96PG2 267 aa12.68□□□□□ -0.38
LIMS2-217ENST00000545738 FKBP11Q9NYL4 201 aa12.68□□□□□ -0.38
LIMS2-217ENST00000545738 SIX6O95475 246 aa12.68□□□□□ -0.38
LIMS2-217ENST00000545738 IFNA17P01571 189 aa12.68□□□□□ -0.38
LIMS2-217ENST00000545738 CRYGCP07315 174 aa12.68□□□□□ -0.38
LIMS2-217ENST00000545738 OR13C7P0DN81 318 aa12.68□□□□□ -0.38
LIMS2-217ENST00000545738 PSMB6P28072 239 aa12.68□□□□□ -0.38
LIMS2-217ENST00000545738 TNFRSF9Q07011 255 aa12.68□□□□□ -0.38
LIMS2-217ENST00000545738 TMEM267Q0VDI3 215 aaPredicted RBP12.68□□□□□ -0.38
LIMS2-217ENST00000545738 TEX38Q6PEX7 206 aa12.68□□□□□ -0.38
LIMS2-217ENST00000545738 C12orf54Q6X4T0 127 aa12.68□□□□□ -0.38
LIMS2-217ENST00000545738 OR4D5Q8NGN0 318 aa12.68□□□□□ -0.38
LIMS2-217ENST00000545738 FANCD2OSQ96PS1 177 aa12.68□□□□□ -0.38
LIMS2-217ENST00000545738 ZNF747Q9BV97 191 aa12.68□□□□□ -0.38
LIMS2-217ENST00000545738 HSPB7Q9UBY9 170 aa12.68□□□□□ -0.38
LIMS2-217ENST00000545738 WNK1Q9H4A3 2382 aa12.67□□□□□ -0.38
LIMS2-217ENST00000545738 NPIPB5A8MRT5 1133 aa12.67□□□□□ -0.38
LIMS2-217ENST00000545738 SLC25A6P12236 298 aa12.67□□□□□ -0.38
LIMS2-217ENST00000545738 SLC35B1P78383 322 aa12.67□□□□□ -0.38
LIMS2-217ENST00000545738 FOXE3Q13461 319 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms