RNA–Protein interactions for RNA: ENST00000545354.1

UBE4A-203, Transcript of ubiquitination factor E4A, humanhuman

TSL 2 BASIC

Gene UBE4A, Length 2,149 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4A-203ENST00000545354 MRPL55Q7Z7F7 128 aaKnown RBP4.26□□□□□ -1.73
UBE4A-203ENST00000545354 VKORC1L1Q8N0U8 176 aa4.26□□□□□ -1.73
UBE4A-203ENST00000545354 OR8B3Q8NGG8 313 aa4.26□□□□□ -1.73
UBE4A-203ENST00000545354 CT55Q8WUE5 264 aa4.26□□□□□ -1.73
UBE4A-203ENST00000545354 GNB1LQ9BYB4 327 aa4.26□□□□□ -1.73
UBE4A-203ENST00000545354 ZNF576Q9H609 170 aa4.26□□□□□ -1.73
UBE4A-203ENST00000545354 SCRT2Q9NQ03 307 aa4.26□□□□□ -1.73
UBE4A-203ENST00000545354 TPSG1Q9NRR2 321 aa4.26□□□□□ -1.73
UBE4A-203ENST00000545354 FZR1Q9UM11 496 aa4.26□□□□□ -1.73
UBE4A-203ENST00000545354 ZNF835Q9Y2P0 537 aa4.26□□□□□ -1.73
UBE4A-203ENST00000545354 LAMA3Q16787 3333 aa4.26□□□□□ -1.73
UBE4A-203ENST00000545354 COL5A3P25940 1745 aaPredicted RBP4.26□□□□□ -1.73
UBE4A-203ENST00000545354 TRBV20-1A0A075B6N2 111 aa4.25□□□□□ -1.73
UBE4A-203ENST00000545354 FAM236DA0A1B0GTK5 79 aa4.25□□□□□ -1.73
UBE4A-203ENST00000545354 LILRA5A6NI73 299 aa4.25□□□□□ -1.73
UBE4A-203ENST00000545354 NDUFC2-KCTD14E9PQ53 114 aa4.25□□□□□ -1.73
UBE4A-203ENST00000545354 IGHV3-7P01780 117 aa4.25□□□□□ -1.73
UBE4A-203ENST00000545354 FAM236CP0DP71 79 aa4.25□□□□□ -1.73
UBE4A-203ENST00000545354 EMDP50402 254 aa4.25□□□□□ -1.73
UBE4A-203ENST00000545354 HILS1P60008 231 aa4.25□□□□□ -1.73
UBE4A-203ENST00000545354 PPP1CAP62136 330 aa4.25□□□□□ -1.73
UBE4A-203ENST00000545354 UNC119Q13432 240 aa4.25□□□□□ -1.73
UBE4A-203ENST00000545354 TESK1Q15569 626 aa4.25□□□□□ -1.73
UBE4A-203ENST00000545354 ZNF791Q3KP31 576 aaPredicted RBP4.25□□□□□ -1.73
UBE4A-203ENST00000545354 ZNF324BQ6AW86 544 aaPredicted RBP4.25□□□□□ -1.73
UBE4A-203ENST00000545354 SLC25A47Q6Q0C1 308 aa4.25□□□□□ -1.73
UBE4A-203ENST00000545354 ACP7Q6ZNF0 438 aa4.25□□□□□ -1.73
UBE4A-203ENST00000545354 SLC25A48Q6ZT89 311 aaKnown RBP4.25□□□□□ -1.73
UBE4A-203ENST00000545354 SPATA12Q7Z6I5 190 aa4.25□□□□□ -1.73
UBE4A-203ENST00000545354 ELSPBP1Q96BH3 223 aa4.25□□□□□ -1.73
UBE4A-203ENST00000545354 OR8B2Q96RD0 313 aa4.25□□□□□ -1.73
UBE4A-203ENST00000545354 ADOQ96SZ5 270 aa4.25□□□□□ -1.73
UBE4A-203ENST00000545354 C20orf78Q9BR46 151 aa4.25□□□□□ -1.73
UBE4A-203ENST00000545354 KCNIP2Q9NS61 270 aa4.25□□□□□ -1.73
UBE4A-203ENST00000545354 SLC39A9Q9NUM3 307 aa4.25□□□□□ -1.73
UBE4A-203ENST00000545354 DLL3Q9NYJ7 618 aa4.25□□□□□ -1.73
UBE4A-203ENST00000545354 C21orf62Q9NYP8 219 aa4.25□□□□□ -1.73
UBE4A-203ENST00000545354 DLEC1Q9Y238 1755 aa4.25□□□□□ -1.73
UBE4A-203ENST00000545354 TRIOBPQ9H2D6 2365 aa4.25□□□□□ -1.73
UBE4A-203ENST00000545354 SCN1AP35498 2009 aa4.25□□□□□ -1.73
UBE4A-203ENST00000545354 SHISA3A0PJX4 238 aa4.25□□□□□ -1.73
UBE4A-203ENST00000545354 C1orf226A1L170 272 aa4.25□□□□□ -1.73
UBE4A-203ENST00000545354 FAM24AA6NFZ4 105 aa4.25□□□□□ -1.73
UBE4A-203ENST00000545354 FCN1O00602 326 aa4.25□□□□□ -1.73
UBE4A-203ENST00000545354 CRYGSP22914 178 aa4.25□□□□□ -1.73
UBE4A-203ENST00000545354 EDNRAP25101 427 aa4.25□□□□□ -1.73
UBE4A-203ENST00000545354 IL3RAP26951 378 aa4.25□□□□□ -1.73
UBE4A-203ENST00000545354 EIF3IQ13347 325 aaKnown RBP4.25□□□□□ -1.73
UBE4A-203ENST00000545354 RTP5Q14D33 572 aa4.25□□□□□ -1.73
UBE4A-203ENST00000545354 FAM27D1Q5T7N8 215 aa4.25□□□□□ -1.73
UBE4A-203ENST00000545354 ANKRD29Q8N6D5 301 aa4.25□□□□□ -1.73
UBE4A-203ENST00000545354 OR10G8Q8NGN5 311 aa4.25□□□□□ -1.73
UBE4A-203ENST00000545354 STAG3L4Q8TBR4 150 aa4.25□□□□□ -1.73
UBE4A-203ENST00000545354 LMX1AQ8TE12 382 aa4.25□□□□□ -1.73
UBE4A-203ENST00000545354 GATAD1Q8WUU5 269 aa4.25□□□□□ -1.73
UBE4A-203ENST00000545354 APOBEC4Q8WW27 367 aaKnown RBP4.25□□□□□ -1.73
UBE4A-203ENST00000545354 UBE2E3Q969T4 207 aa4.25□□□□□ -1.73
UBE4A-203ENST00000545354 DNAJA3Q96EY1 480 aa4.25□□□□□ -1.73
UBE4A-203ENST00000545354 DPH3Q96FX2 82 aa4.25□□□□□ -1.73
UBE4A-203ENST00000545354 OR2A5Q96R48 311 aa4.25□□□□□ -1.73
UBE4A-203ENST00000545354 SMIM7Q9BQ49 75 aa4.25□□□□□ -1.73
UBE4A-203ENST00000545354 VKORC1Q9BQB6 163 aa4.25□□□□□ -1.73
UBE4A-203ENST00000545354 TMEM147Q9BVK8 224 aa4.25□□□□□ -1.73
UBE4A-203ENST00000545354 CACNG5Q9UF02 275 aa4.25□□□□□ -1.73
UBE4A-203ENST00000545354 TRIP11Q15643 1979 aa4.25□□□□□ -1.73
UBE4A-203ENST00000545354 DDX60LQ5H9U9 1706 aaKnown RBP4.24□□□□□ -1.73
UBE4A-203ENST00000545354 GBF1Q92538 1859 aa4.24□□□□□ -1.73
UBE4A-203ENST00000545354 PATJQ8NI35 1801 aa4.24□□□□□ -1.73
UBE4A-203ENST00000545354 A0A096LPE4 126 aa4.24□□□□□ -1.73
UBE4A-203ENST00000545354 A0A1W2PPZ6 126 aa4.24□□□□□ -1.73
UBE4A-203ENST00000545354 ZNF732B4DXR9 585 aa4.24□□□□□ -1.73
UBE4A-203ENST00000545354 PRSS46E5RG02 174 aa4.24□□□□□ -1.73
UBE4A-203ENST00000545354 H7C1H1 209 aa4.24□□□□□ -1.73
UBE4A-203ENST00000545354 OR1I1O60431 355 aa4.24□□□□□ -1.73
UBE4A-203ENST00000545354 STC2O76061 302 aa4.24□□□□□ -1.73
UBE4A-203ENST00000545354 NMUP48645 174 aa4.24□□□□□ -1.73
UBE4A-203ENST00000545354 CLDN2P57739 230 aa4.24□□□□□ -1.73
UBE4A-203ENST00000545354 DYNLT1P63172 113 aa4.24□□□□□ -1.73
UBE4A-203ENST00000545354 PRDX1Q06830 199 aaKnown RBP4.24□□□□□ -1.73
UBE4A-203ENST00000545354 LOXL1Q08397 574 aaPredicted RBP4.24□□□□□ -1.73
UBE4A-203ENST00000545354 WFDC2Q14508 124 aa4.24□□□□□ -1.73
UBE4A-203ENST00000545354 NMSQ5H8A3 153 aa4.24□□□□□ -1.73
UBE4A-203ENST00000545354 SP5Q6BEB4 398 aaPredicted RBP4.24□□□□□ -1.73
UBE4A-203ENST00000545354 TMEM14EPQ6UXP3 125 aa4.24□□□□□ -1.73
UBE4A-203ENST00000545354 HSD11B1LQ7Z5J1 315 aa4.24□□□□□ -1.73
UBE4A-203ENST00000545354 TEN1Q86WV5 123 aa4.24□□□□□ -1.73
UBE4A-203ENST00000545354 TEX45Q8NA69 505 aa4.24□□□□□ -1.73
UBE4A-203ENST00000545354 NFAM1Q8NET5 270 aaPredicted RBP4.24□□□□□ -1.73
UBE4A-203ENST00000545354 OR2AJ1Q8NGZ0 328 aa4.24□□□□□ -1.73
UBE4A-203ENST00000545354 PIFOQ8TCI5 191 aa4.24□□□□□ -1.73
UBE4A-203ENST00000545354 MRPL53Q96EL3 112 aaKnown RBP4.24□□□□□ -1.73
UBE4A-203ENST00000545354 SLC25A44Q96H78 314 aaPredicted RBP4.24□□□□□ -1.73
UBE4A-203ENST00000545354 WNT10AQ9GZT5 417 aa4.24□□□□□ -1.73
UBE4A-203ENST00000545354 R3HDMLQ9H3Y0 253 aa4.24□□□□□ -1.73
UBE4A-203ENST00000545354 WRAP73Q9P2S5 460 aaPredicted RBP4.24□□□□□ -1.73
UBE4A-203ENST00000545354 LSM7Q9UK45 103 aaKnown RBP4.24□□□□□ -1.73
UBE4A-203ENST00000545354 V9GY05 133 aa4.24□□□□□ -1.73
UBE4A-203ENST00000545354 ARL2-SNX15V9GYD0 113 aa4.24□□□□□ -1.73
UBE4A-203ENST00000545354 SIPA1L3O60292 1781 aaPredicted RBP4.24□□□□□ -1.73
UBE4A-203ENST00000545354 NRXN2Q9P2S2 1712 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms