RNA–Protein interactions for RNA: ENST00000544990.5

CPSF7-224, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 646 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-224ENST00000544990 A0A087WW49 117 aa5.68□□□□□ -1.5
CPSF7-224ENST00000544990 FAM223BA6NKX1 122 aa5.68□□□□□ -1.5
CPSF7-224ENST00000544990 H3BMQ9 156 aa5.68□□□□□ -1.5
CPSF7-224ENST00000544990 M0QYG6 137 aa5.68□□□□□ -1.5
CPSF7-224ENST00000544990 UPK2O00526 184 aa5.68□□□□□ -1.5
CPSF7-224ENST00000544990 CTDSPLO15194 276 aa5.68□□□□□ -1.5
CPSF7-224ENST00000544990 SNAPC5O75971 98 aa5.68□□□□□ -1.5
CPSF7-224ENST00000544990 S1PR2O95136 353 aa5.68□□□□□ -1.5
CPSF7-224ENST00000544990 RAB3DO95716 219 aa5.68□□□□□ -1.5
CPSF7-224ENST00000544990 CD3DP04234 171 aa5.68□□□□□ -1.5
CPSF7-224ENST00000544990 FGF2P09038 288 aa5.68□□□□□ -1.5
CPSF7-224ENST00000544990 ZNF735P0CB33 412 aa5.68□□□□□ -1.5
CPSF7-224ENST00000544990 PGAM2P15259 253 aa5.68□□□□□ -1.5
CPSF7-224ENST00000544990 HLA-GP17693 338 aa5.68□□□□□ -1.5
CPSF7-224ENST00000544990 LPAR6P43657 344 aa5.68□□□□□ -1.5
CPSF7-224ENST00000544990 ATP5G2Q06055 141 aa5.68□□□□□ -1.5
CPSF7-224ENST00000544990 DCTN2Q13561 401 aaKnown RBP5.68□□□□□ -1.5
CPSF7-224ENST00000544990 TATDN3Q17R31 274 aa5.68□□□□□ -1.5
CPSF7-224ENST00000544990 PHLDA2Q53GA4 152 aa5.68□□□□□ -1.5
CPSF7-224ENST00000544990 DEFB121Q5J5C9 76 aa5.68□□□□□ -1.5
CPSF7-224ENST00000544990 FAM209BQ5JX69 171 aa5.68□□□□□ -1.5
CPSF7-224ENST00000544990 C10orf55Q5SWW7 151 aa5.68□□□□□ -1.5
CPSF7-224ENST00000544990 ZNF429Q86V71 674 aa5.68□□□□□ -1.5
CPSF7-224ENST00000544990 FAM223AQ8IWN6 122 aa5.68□□□□□ -1.5
CPSF7-224ENST00000544990 TMEM229BQ8NBD8 167 aa5.68□□□□□ -1.5
CPSF7-224ENST00000544990 DLX4Q92988 240 aaPredicted RBP5.68□□□□□ -1.5
CPSF7-224ENST00000544990 ZNF486Q96H40 463 aaPredicted RBP5.68□□□□□ -1.5
CPSF7-224ENST00000544990 ELOVL1Q9BW60 279 aa5.68□□□□□ -1.5
CPSF7-224ENST00000544990 SLC2A9Q9NRM0 540 aa5.68□□□□□ -1.5
CPSF7-224ENST00000544990 FAM212BQ9NTI7 297 aaPredicted RBP5.68□□□□□ -1.5
CPSF7-224ENST00000544990 PEF1Q9UBV8 284 aaKnown RBP5.68□□□□□ -1.5
CPSF7-224ENST00000544990 CMYA5Q8N3K9 4069 aa5.68□□□□□ -1.5
CPSF7-224ENST00000544990 TRBV9A0A0B4J1U6 114 aa5.67□□□□□ -1.5
CPSF7-224ENST00000544990 HMX3A6NHT5 357 aa5.67□□□□□ -1.5
CPSF7-224ENST00000544990 MARCH11A6NNE9 402 aa5.67□□□□□ -1.5
CPSF7-224ENST00000544990 NPIPB5A8MRT5 1133 aa5.67□□□□□ -1.5
CPSF7-224ENST00000544990 TEX22C9J3V5 150 aa5.67□□□□□ -1.5
CPSF7-224ENST00000544990 E7EUB6 86 aa5.67□□□□□ -1.5
CPSF7-224ENST00000544990 CYB5BO43169 146 aa5.67□□□□□ -1.5
CPSF7-224ENST00000544990 SAP30O75446 220 aa5.67□□□□□ -1.5
CPSF7-224ENST00000544990 KRASP01116 189 aa5.67□□□□□ -1.5
CPSF7-224ENST00000544990 CD74P04233 296 aa5.67□□□□□ -1.5
CPSF7-224ENST00000544990 IL6RP08887 468 aaPredicted RBP5.67□□□□□ -1.5
CPSF7-224ENST00000544990 DEFA4P12838 97 aa5.67□□□□□ -1.5
CPSF7-224ENST00000544990 HIST1H1BP16401 226 aaKnown RBP5.67□□□□□ -1.5
CPSF7-224ENST00000544990 PSMB6P28072 239 aa5.67□□□□□ -1.5
CPSF7-224ENST00000544990 KRTAP10-11P60412 298 aa5.67□□□□□ -1.5
CPSF7-224ENST00000544990 RHOGP84095 191 aa5.67□□□□□ -1.5
CPSF7-224ENST00000544990 MEF2DQ14814 521 aa5.67□□□□□ -1.5
CPSF7-224ENST00000544990 SCGB2B2Q4G0G5 96 aa5.67□□□□□ -1.5
CPSF7-224ENST00000544990 THOC7Q6I9Y2 204 aaKnown RBP5.67□□□□□ -1.5
CPSF7-224ENST00000544990 STEAP1BQ6NZ63 245 aa5.67□□□□□ -1.5
CPSF7-224ENST00000544990 ZNF343Q6P1L6 599 aa5.67□□□□□ -1.5
CPSF7-224ENST00000544990 TBC1D26Q86UD7 250 aa5.67□□□□□ -1.5
CPSF7-224ENST00000544990 LHFPL1Q86WI0 220 aa5.67□□□□□ -1.5
CPSF7-224ENST00000544990 CADM3Q8N126 398 aa5.67□□□□□ -1.5
CPSF7-224ENST00000544990 NECAP1Q8NC96 275 aa5.67□□□□□ -1.5
CPSF7-224ENST00000544990 TERB2Q8NHR7 220 aa5.67□□□□□ -1.5
CPSF7-224ENST00000544990 MCFD2Q8NI22 146 aa5.67□□□□□ -1.5
CPSF7-224ENST00000544990 ZFAND1Q8TCF1 268 aa5.67□□□□□ -1.5
CPSF7-224ENST00000544990 SMIM4Q8WVI0 70 aa5.67□□□□□ -1.5
CPSF7-224ENST00000544990 OR4C12Q96R67 309 aa5.67□□□□□ -1.5
CPSF7-224ENST00000544990 TSC22D3Q99576 134 aa5.67□□□□□ -1.5
CPSF7-224ENST00000544990 ARPC5LQ9BPX5 153 aa5.67□□□□□ -1.5
CPSF7-224ENST00000544990 SRSF8Q9BRL6 282 aaKnown RBP5.67□□□□□ -1.5
CPSF7-224ENST00000544990 AKIP1Q9NQ31 210 aa5.67□□□□□ -1.5
CPSF7-224ENST00000544990 FKBP11Q9NYL4 201 aa5.67□□□□□ -1.5
CPSF7-224ENST00000544990 RSL24D1Q9UHA3 163 aaKnown RBP5.67□□□□□ -1.5
CPSF7-224ENST00000544990 SLC45A2Q9UMX9 530 aa5.67□□□□□ -1.5
CPSF7-224ENST00000544990 CEPT1Q9Y6K0 416 aa5.67□□□□□ -1.5
CPSF7-224ENST00000544990 TRAV3A0A0B4J244 114 aa5.66□□□□□ -1.5
CPSF7-224ENST00000544990 FABP12A6NFH5 140 aa5.66□□□□□ -1.5
CPSF7-224ENST00000544990 DISC1C4P0D8 188 aa5.66□□□□□ -1.5
CPSF7-224ENST00000544990 DIRC3C9JPN6 131 aa5.66□□□□□ -1.5
CPSF7-224ENST00000544990 K7EIL1 84 aa5.66□□□□□ -1.5
CPSF7-224ENST00000544990 OR2J3O76001 311 aa5.66□□□□□ -1.5
CPSF7-224ENST00000544990 ATG12O94817 140 aa5.66□□□□□ -1.5
CPSF7-224ENST00000544990 PRH1P02810 166 aa5.66□□□□□ -1.5
CPSF7-224ENST00000544990 SERPINE2P07093 398 aa5.66□□□□□ -1.5
CPSF7-224ENST00000544990 CRYGCP07315 174 aa5.66□□□□□ -1.5
CPSF7-224ENST00000544990 AKAIN1P0CW23 69 aa5.66□□□□□ -1.5
CPSF7-224ENST00000544990 TRAPPC2P0DI81 140 aa5.66□□□□□ -1.5
CPSF7-224ENST00000544990 TRAPPC2BP0DI82 140 aa5.66□□□□□ -1.5
CPSF7-224ENST00000544990 RPA2P15927 270 aa5.66□□□□□ -1.5
CPSF7-224ENST00000544990 CTRB1P17538 263 aa5.66□□□□□ -1.5
CPSF7-224ENST00000544990 PTBP1P26599 531 aaKnown RBP eCLIP5.66□□□□□ -1.5
CPSF7-224ENST00000544990 TNFSF8P32971 234 aa5.66□□□□□ -1.5
CPSF7-224ENST00000544990 S100A5P33763 92 aa5.66□□□□□ -1.5
CPSF7-224ENST00000544990 G6PCP35575 357 aa5.66□□□□□ -1.5
CPSF7-224ENST00000544990 PIGPP57054 158 aa5.66□□□□□ -1.5
CPSF7-224ENST00000544990 OR2B8PP59922 312 aa5.66□□□□□ -1.5
CPSF7-224ENST00000544990 RND3P61587 244 aa5.66□□□□□ -1.5
CPSF7-224ENST00000544990 ZNF45Q02386 682 aa5.66□□□□□ -1.5
CPSF7-224ENST00000544990 EXOSC2Q13868 293 aaKnown RBP5.66□□□□□ -1.5
CPSF7-224ENST00000544990 RPEL1Q2QD12 228 aa5.66□□□□□ -1.5
CPSF7-224ENST00000544990 C15orf32Q32M92 178 aa5.66□□□□□ -1.5
CPSF7-224ENST00000544990 ZNF585BQ52M93 769 aa5.66□□□□□ -1.5
CPSF7-224ENST00000544990 CTRB2Q6GPI1 263 aa5.66□□□□□ -1.5
CPSF7-224ENST00000544990 ACSM6Q6P461 480 aa5.66□□□□□ -1.5
CPSF7-224ENST00000544990 H2BFWTQ7Z2G1 175 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms