RNA–Protein interactions for RNA: ENST00000544584.1

CLSTN3-215, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 546 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-215ENST00000544584 C18orf65Q6ZTR6 163 aa4.33□□□□□ -1.72
CLSTN3-215ENST00000544584 FAM219AQ8IW50 185 aa4.33□□□□□ -1.72
CLSTN3-215ENST00000544584 LAX1Q8IWV1 398 aa4.33□□□□□ -1.72
CLSTN3-215ENST00000544584 VKORC1L1Q8N0U8 176 aa4.33□□□□□ -1.72
CLSTN3-215ENST00000544584 TMEM229BQ8NBD8 167 aa4.33□□□□□ -1.72
CLSTN3-215ENST00000544584 VN1R17PQ8TDU5 208 aa4.33□□□□□ -1.72
CLSTN3-215ENST00000544584 DYNLRB2Q8TF09 96 aa4.33□□□□□ -1.72
CLSTN3-215ENST00000544584 DLX4Q92988 240 aaPredicted RBP4.33□□□□□ -1.72
CLSTN3-215ENST00000544584 MARC2Q969Z3 335 aa4.33□□□□□ -1.72
CLSTN3-215ENST00000544584 B9D2Q9BPU9 175 aa4.33□□□□□ -1.72
CLSTN3-215ENST00000544584 HINT2Q9BX68 163 aa4.33□□□□□ -1.72
CLSTN3-215ENST00000544584 TUBA4BQ9H853 241 aa4.33□□□□□ -1.72
CLSTN3-215ENST00000544584 TPSG1Q9NRR2 321 aa4.33□□□□□ -1.72
CLSTN3-215ENST00000544584 SLC2A8Q9NY64 477 aa4.33□□□□□ -1.72
CLSTN3-215ENST00000544584 NDUFA13Q9P0J0 144 aa4.33□□□□□ -1.72
CLSTN3-215ENST00000544584 FBXL7Q9UJT9 491 aa4.33□□□□□ -1.72
CLSTN3-215ENST00000544584 FBXO7Q9Y3I1 522 aa4.33□□□□□ -1.72
CLSTN3-215ENST00000544584 OR51B2Q9Y5P1 312 aa4.33□□□□□ -1.72
CLSTN3-215ENST00000544584 DNAH1Q9P2D7 4330 aa4.32□□□□□ -1.72
CLSTN3-215ENST00000544584 TNCP24821 2201 aa4.32□□□□□ -1.72
CLSTN3-215ENST00000544584 FABP12A6NFH5 140 aa4.32□□□□□ -1.72
CLSTN3-215ENST00000544584 CENPXA8MT69 81 aa4.32□□□□□ -1.72
CLSTN3-215ENST00000544584 ZNF701M0R085 212 aaPredicted RBP4.32□□□□□ -1.72
CLSTN3-215ENST00000544584 LGALS9O00182 355 aa4.32□□□□□ -1.72
CLSTN3-215ENST00000544584 CORTO00230 105 aa4.32□□□□□ -1.72
CLSTN3-215ENST00000544584 SOX15O60248 233 aa4.32□□□□□ -1.72
CLSTN3-215ENST00000544584 IFNA17P01571 189 aa4.32□□□□□ -1.72
CLSTN3-215ENST00000544584 IGLV2-14P01704 120 aa4.32□□□□□ -1.72
CLSTN3-215ENST00000544584 PRB2P02812 416 aaPredicted RBP4.32□□□□□ -1.72
CLSTN3-215ENST00000544584 CD3DP04234 171 aa4.32□□□□□ -1.72
CLSTN3-215ENST00000544584 APELAP0DMC3 54 aa4.32□□□□□ -1.72
CLSTN3-215ENST00000544584 OR13C7P0DN81 318 aa4.32□□□□□ -1.72
CLSTN3-215ENST00000544584 GP9P14770 177 aa4.32□□□□□ -1.72
CLSTN3-215ENST00000544584 CTRB1P17538 263 aa4.32□□□□□ -1.72
CLSTN3-215ENST00000544584 PTBP1P26599 531 aaKnown RBP eCLIP4.32□□□□□ -1.722e-6■■■□□ 16.6
CLSTN3-215ENST00000544584 SLURP1P55000 103 aa4.32□□□□□ -1.72
CLSTN3-215ENST00000544584 PIGPP57054 158 aa4.32□□□□□ -1.72
CLSTN3-215ENST00000544584 SYNJ2BPP57105 145 aa4.32□□□□□ -1.72
CLSTN3-215ENST00000544584 LINC00205P59089 165 aa4.32□□□□□ -1.72
CLSTN3-215ENST00000544584 RPL30P62888 115 aaKnown RBP4.32□□□□□ -1.72
CLSTN3-215ENST00000544584 DHODHQ02127 395 aa4.32□□□□□ -1.72
CLSTN3-215ENST00000544584 EIF4EBP1Q13541 118 aaPredicted RBP4.32□□□□□ -1.72
CLSTN3-215ENST00000544584 PHLDA2Q53GA4 152 aa4.32□□□□□ -1.72
CLSTN3-215ENST00000544584 CTRB2Q6GPI1 263 aa4.32□□□□□ -1.72
CLSTN3-215ENST00000544584 LAMTOR1Q6IAA8 161 aa4.32□□□□□ -1.72
CLSTN3-215ENST00000544584 SLC25A24Q6NUK1 477 aa4.32□□□□□ -1.72
CLSTN3-215ENST00000544584 STEAP1BQ6NZ63 245 aa4.32□□□□□ -1.72
CLSTN3-215ENST00000544584 PLET1Q6UQ28 207 aa4.32□□□□□ -1.72
CLSTN3-215ENST00000544584 SLC16A13Q7RTY0 426 aa4.32□□□□□ -1.72
CLSTN3-215ENST00000544584 TBC1D26Q86UD7 250 aa4.32□□□□□ -1.72
CLSTN3-215ENST00000544584 GPHB5Q86YW7 130 aa4.32□□□□□ -1.72
CLSTN3-215ENST00000544584 LYSMD2Q8IV50 215 aa4.32□□□□□ -1.72
CLSTN3-215ENST00000544584 SLC35G3Q8N808 338 aa4.32□□□□□ -1.72
CLSTN3-215ENST00000544584 GDPD1Q8N9F7 314 aa4.32□□□□□ -1.72
CLSTN3-215ENST00000544584 MCFD2Q8NI22 146 aa4.32□□□□□ -1.72
CLSTN3-215ENST00000544584 SMIM4Q8WVI0 70 aa4.32□□□□□ -1.72
CLSTN3-215ENST00000544584 BSCL2Q96G97 398 aaPredicted RBP4.32□□□□□ -1.72
CLSTN3-215ENST00000544584 NARS2Q96I59 477 aaKnown RBP4.32□□□□□ -1.72
CLSTN3-215ENST00000544584 HIPK2Q9H2X6 1198 aa4.32□□□□□ -1.72
CLSTN3-215ENST00000544584 PLEKHA3Q9HB20 300 aa4.32□□□□□ -1.72
CLSTN3-215ENST00000544584 AKIP1Q9NQ31 210 aa4.32□□□□□ -1.72
CLSTN3-215ENST00000544584 UFC1Q9Y3C8 167 aa4.32□□□□□ -1.72
CLSTN3-215ENST00000544584 DNAH9Q9NYC9 4486 aa4.31□□□□□ -1.72
CLSTN3-215ENST00000544584 DNAH3Q8TD57 4116 aa4.31□□□□□ -1.72
CLSTN3-215ENST00000544584 C3orf85A0A1B0GTC6 90 aa4.31□□□□□ -1.72
CLSTN3-215ENST00000544584 RPS10-NUDT3A0A1W2PQS6 291 aa4.31□□□□□ -1.72
CLSTN3-215ENST00000544584 ZNF320A2RRD8 509 aa4.31□□□□□ -1.72
CLSTN3-215ENST00000544584 HMX3A6NHT5 357 aa4.31□□□□□ -1.72
CLSTN3-215ENST00000544584 TEX22C9J3V5 150 aa4.31□□□□□ -1.72
CLSTN3-215ENST00000544584 K7EIL1 84 aa4.31□□□□□ -1.72
CLSTN3-215ENST00000544584 NUPL2O15504 423 aaKnown RBP4.31□□□□□ -1.72
CLSTN3-215ENST00000544584 OR2J3O76001 311 aa4.31□□□□□ -1.72
CLSTN3-215ENST00000544584 S1PR2O95136 353 aa4.31□□□□□ -1.72
CLSTN3-215ENST00000544584 CD74P04233 296 aa4.31□□□□□ -1.72
CLSTN3-215ENST00000544584 CLEC3BP05452 202 aa4.31□□□□□ -1.72
CLSTN3-215ENST00000544584 CTSDP07339 412 aaPredicted RBP4.31□□□□□ -1.72
CLSTN3-215ENST00000544584 IL6RP08887 468 aaPredicted RBP4.31□□□□□ -1.72
CLSTN3-215ENST00000544584 SMIM18P0DKX4 95 aa4.31□□□□□ -1.72
CLSTN3-215ENST00000544584 PTHLHP12272 177 aa4.31□□□□□ -1.72
CLSTN3-215ENST00000544584 G6PCP35575 357 aa4.31□□□□□ -1.72
CLSTN3-215ENST00000544584 NPBWR1P48145 328 aa4.31□□□□□ -1.72
CLSTN3-215ENST00000544584 ELLP55199 621 aaPredicted RBP4.31□□□□□ -1.72
CLSTN3-215ENST00000544584 CMC4P56277 68 aaPredicted RBP4.31□□□□□ -1.72
CLSTN3-215ENST00000544584 OR2B8PP59922 312 aa4.31□□□□□ -1.72
CLSTN3-215ENST00000544584 KRTAP10-11P60412 298 aa4.31□□□□□ -1.72
CLSTN3-215ENST00000544584 HSPE1P61604 102 aaKnown RBP4.31□□□□□ -1.72
CLSTN3-215ENST00000544584 RPP30P78346 268 aaKnown RBP4.31□□□□□ -1.72
CLSTN3-215ENST00000544584 PYDC2Q56P42 97 aa4.31□□□□□ -1.72
CLSTN3-215ENST00000544584 ETFRF1Q6IPR1 90 aa4.31□□□□□ -1.72
CLSTN3-215ENST00000544584 RBPMS2Q6ZRY4 209 aaKnown RBP4.31□□□□□ -1.72
CLSTN3-215ENST00000544584 TOMM5Q8N4H5 51 aa4.31□□□□□ -1.72
CLSTN3-215ENST00000544584 OR1P1Q8NH06 330 aa4.31□□□□□ -1.72
CLSTN3-215ENST00000544584 OR52I2Q8NH67 350 aa4.31□□□□□ -1.72
CLSTN3-215ENST00000544584 CASTOR1Q8WTX7 329 aa4.31□□□□□ -1.72
CLSTN3-215ENST00000544584 C5orf30Q96GV9 206 aa4.31□□□□□ -1.72
CLSTN3-215ENST00000544584 WWC2-AS2Q96NR7 200 aa4.31□□□□□ -1.72
CLSTN3-215ENST00000544584 ABHD1Q96SE0 405 aa4.31□□□□□ -1.72
CLSTN3-215ENST00000544584 TXN2Q99757 166 aa4.31□□□□□ -1.72
CLSTN3-215ENST00000544584 ALX4Q9H161 411 aaPredicted RBP4.31□□□□□ -1.72
CLSTN3-215ENST00000544584 NDUFA4L2Q9NRX3 87 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms