RNA–Protein interactions for RNA: ENST00000543462.1

VEGFB-204, Transcript of vascular endothelial growth factor B, humanhuman

TSL 2

Gene VEGFB, Length 663 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFB-204ENST00000543462 ACTL6BO94805 426 aa7.68□□□□□ -1.18
VEGFB-204ENST00000543462 SFT2D2O95562 160 aa7.68□□□□□ -1.18
VEGFB-204ENST00000543462 PSMB6P28072 239 aa7.68□□□□□ -1.18
VEGFB-204ENST00000543462 NSUN5P1Q3KNT7 163 aa7.68□□□□□ -1.18
VEGFB-204ENST00000543462 ANKRD55Q3KP44 614 aa7.68□□□□□ -1.18
VEGFB-204ENST00000543462 C19orf35Q6ZS72 473 aa7.68□□□□□ -1.18
VEGFB-204ENST00000543462 TMED4Q7Z7H5 227 aa7.68□□□□□ -1.18
VEGFB-204ENST00000543462 ZNF695Q8IW36 515 aa7.68□□□□□ -1.18
VEGFB-204ENST00000543462 FAM219AQ8IW50 185 aa7.68□□□□□ -1.18
VEGFB-204ENST00000543462 CENPSQ8N2Z9 138 aa7.68□□□□□ -1.18
VEGFB-204ENST00000543462 SLC35G3Q8N808 338 aa7.68□□□□□ -1.18
VEGFB-204ENST00000543462 LSM10Q969L4 123 aaKnown RBP7.68□□□□□ -1.18
VEGFB-204ENST00000543462 FANCD2OSQ96PS1 177 aa7.68□□□□□ -1.18
VEGFB-204ENST00000543462 NOTCH1P46531 2555 aa7.68□□□□□ -1.18
VEGFB-204ENST00000543462 NOTCH3Q9UM47 2321 aa7.67□□□□□ -1.18
VEGFB-204ENST00000543462 IGLV11-55A0A075B6I3 123 aa7.67□□□□□ -1.18
VEGFB-204ENST00000543462 A0A0B4J2A0 478 aa7.67□□□□□ -1.18
VEGFB-204ENST00000543462 A0A1W2PRX2 142 aa7.67□□□□□ -1.18
VEGFB-204ENST00000543462 CENPXA8MT69 81 aa7.67□□□□□ -1.18
VEGFB-204ENST00000543462 LGALS1P09382 135 aaKnown RBP7.67□□□□□ -1.18
VEGFB-204ENST00000543462 APELAP0DMC3 54 aa7.67□□□□□ -1.18
VEGFB-204ENST00000543462 PF4V1P10720 104 aa7.67□□□□□ -1.18
VEGFB-204ENST00000543462 AKR1C4P17516 323 aa7.67□□□□□ -1.18
VEGFB-204ENST00000543462 INPP1P49441 399 aa7.67□□□□□ -1.18
VEGFB-204ENST00000543462 MFAP2P55001 183 aa7.67□□□□□ -1.18
VEGFB-204ENST00000543462 SRPXP78539 464 aa7.67□□□□□ -1.18
VEGFB-204ENST00000543462 PRCDQ00LT1 54 aa7.67□□□□□ -1.18
VEGFB-204ENST00000543462 DHRS2Q13268 280 aa7.67□□□□□ -1.18
VEGFB-204ENST00000543462 DCTN2Q13561 401 aaKnown RBP7.67□□□□□ -1.18
VEGFB-204ENST00000543462 TRIM16LQ309B1 348 aa7.67□□□□□ -1.18
VEGFB-204ENST00000543462 TMEM268Q5VZI3 342 aa7.67□□□□□ -1.18
VEGFB-204ENST00000543462 PVRIGQ6DKI7 326 aa7.67□□□□□ -1.18
VEGFB-204ENST00000543462 TREML4Q6UXN2 200 aa7.67□□□□□ -1.18
VEGFB-204ENST00000543462 C8orf86Q6ZUL3 223 aa7.67□□□□□ -1.18
VEGFB-204ENST00000543462 H2BFWTQ7Z2G1 175 aa7.67□□□□□ -1.18
VEGFB-204ENST00000543462 LINC00482Q8N8I6 264 aa7.67□□□□□ -1.18
VEGFB-204ENST00000543462 ZNF114Q8NC26 417 aa7.67□□□□□ -1.18
VEGFB-204ENST00000543462 KLHL30-AS1Q8NEE0 82 aa7.67□□□□□ -1.18
VEGFB-204ENST00000543462 OR5T1Q8NG75 326 aa7.67□□□□□ -1.18
VEGFB-204ENST00000543462 OR10W1Q8NGF6 305 aa7.67□□□□□ -1.18
VEGFB-204ENST00000543462 OR1L8Q8NGR8 309 aa7.67□□□□□ -1.18
VEGFB-204ENST00000543462 RAX2Q96IS3 184 aa7.67□□□□□ -1.18
VEGFB-204ENST00000543462 FYTTD1Q96QD9 318 aaKnown RBP7.67□□□□□ -1.18
VEGFB-204ENST00000543462 COMMD5Q9GZQ3 224 aa7.67□□□□□ -1.18
VEGFB-204ENST00000543462 ALX4Q9H161 411 aaPredicted RBP7.67□□□□□ -1.18
VEGFB-204ENST00000543462 C20orf85Q9H1P6 137 aa7.67□□□□□ -1.18
VEGFB-204ENST00000543462 COA4Q9NYJ1 87 aa7.67□□□□□ -1.18
VEGFB-204ENST00000543462 SHPKQ9UHJ6 478 aa7.67□□□□□ -1.18
VEGFB-204ENST00000543462 OR51B2Q9Y5P1 312 aa7.67□□□□□ -1.18
VEGFB-204ENST00000543462 DUXBA0A1W2PPF3 345 aa7.66□□□□□ -1.18
VEGFB-204ENST00000543462 C9orf170A2RU37 121 aa7.66□□□□□ -1.18
VEGFB-204ENST00000543462 ST8SIA3O43173 380 aa7.66□□□□□ -1.18
VEGFB-204ENST00000543462 PITX3O75364 302 aa7.66□□□□□ -1.18
VEGFB-204ENST00000543462 SNAPC5O75971 98 aa7.66□□□□□ -1.18
VEGFB-204ENST00000543462 ATG12O94817 140 aa7.66□□□□□ -1.18
VEGFB-204ENST00000543462 TCRBP04435 133 aa7.66□□□□□ -1.18
VEGFB-204ENST00000543462 TRAPPC2P0DI81 140 aa7.66□□□□□ -1.18
VEGFB-204ENST00000543462 TRAPPC2BP0DI82 140 aa7.66□□□□□ -1.18
VEGFB-204ENST00000543462 ANXA7P20073 488 aaKnown RBP7.66□□□□□ -1.18
VEGFB-204ENST00000543462 AKR1C2P52895 323 aa7.66□□□□□ -1.18
VEGFB-204ENST00000543462 HSPE1P61604 102 aaKnown RBP7.66□□□□□ -1.18
VEGFB-204ENST00000543462 DEFA5Q01523 94 aa7.66□□□□□ -1.18
VEGFB-204ENST00000543462 DEFB136Q30KP8 78 aa7.66□□□□□ -1.18
VEGFB-204ENST00000543462 BSXQ3C1V8 233 aa7.66□□□□□ -1.18
VEGFB-204ENST00000543462 KHDC1LQ5JSQ8 128 aa7.66□□□□□ -1.18
VEGFB-204ENST00000543462 HSD17B13Q7Z5P4 300 aaPredicted RBP7.66□□□□□ -1.18
VEGFB-204ENST00000543462 LGI3Q8N145 548 aa7.66□□□□□ -1.18
VEGFB-204ENST00000543462 WFDC9Q8NEX5 89 aa7.66□□□□□ -1.18
VEGFB-204ENST00000543462 OR4F17Q8NGA8 305 aa7.66□□□□□ -1.18
VEGFB-204ENST00000543462 GPR146Q96CH1 333 aa7.66□□□□□ -1.18
VEGFB-204ENST00000543462 OR4F4Q96R69 305 aa7.66□□□□□ -1.18
VEGFB-204ENST00000543462 PHB2Q99623 299 aa7.66□□□□□ -1.18
VEGFB-204ENST00000543462 FKBP11Q9NYL4 201 aa7.66□□□□□ -1.18
VEGFB-204ENST00000543462 FAM223BA6NKX1 122 aa7.65□□□□□ -1.18
VEGFB-204ENST00000543462 DUS4LO95620 317 aaKnown RBP7.65□□□□□ -1.18
VEGFB-204ENST00000543462 PRH1P02810 166 aa7.65□□□□□ -1.18
VEGFB-204ENST00000543462 TRGV3P03979 118 aa7.65□□□□□ -1.18
VEGFB-204ENST00000543462 OR4E1P0C645 316 aa7.65□□□□□ -1.18
VEGFB-204ENST00000543462 TPPP2P59282 170 aa7.65□□□□□ -1.18
VEGFB-204ENST00000543462 RHOGP84095 191 aa7.65□□□□□ -1.18
VEGFB-204ENST00000543462 ZNF343Q6P1L6 599 aa7.65□□□□□ -1.18
VEGFB-204ENST00000543462 LYZL2Q7Z4W2 148 aa7.65□□□□□ -1.18
VEGFB-204ENST00000543462 LYG2Q86SG7 212 aa7.65□□□□□ -1.18
VEGFB-204ENST00000543462 FAM223AQ8IWN6 122 aa7.65□□□□□ -1.18
VEGFB-204ENST00000543462 OR2C3Q8N628 320 aa7.65□□□□□ -1.18
VEGFB-204ENST00000543462 NECAP1Q8NC96 275 aa7.65□□□□□ -1.18
VEGFB-204ENST00000543462 DUSP18Q8NEJ0 188 aa7.65□□□□□ -1.18
VEGFB-204ENST00000543462 OR52E5Q8NH55 327 aa7.65□□□□□ -1.18
VEGFB-204ENST00000543462 MS4A10Q96PG2 267 aa7.65□□□□□ -1.18
VEGFB-204ENST00000543462 NUDT15Q9NV35 164 aa7.65□□□□□ -1.18
VEGFB-204ENST00000543462 CACNG5Q9UF02 275 aa7.65□□□□□ -1.18
VEGFB-204ENST00000543462 KCNIP3Q9Y2W7 256 aa7.65□□□□□ -1.18
VEGFB-204ENST00000543462 MEGF8Q7Z7M0 2845 aa7.65□□□□□ -1.19
VEGFB-204ENST00000543462 CCL24O00175 119 aa7.64□□□□□ -1.19
VEGFB-204ENST00000543462 WIPF1O43516 503 aa7.64□□□□□ -1.19
VEGFB-204ENST00000543462 HLA-AP01891 365 aaKnown RBP7.64□□□□□ -1.19
VEGFB-204ENST00000543462 REG1AP05451 166 aa7.64□□□□□ -1.19
VEGFB-204ENST00000543462 OR13C7P0DN81 318 aa7.64□□□□□ -1.19
VEGFB-204ENST00000543462 SLC25A6P12236 298 aa7.64□□□□□ -1.19
VEGFB-204ENST00000543462 ANXA3P12429 323 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms