RNA–Protein interactions for RNA: ENST00000542845.3

LIMS1-214, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 5

Gene LIMS1, Length 727 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-214ENST00000542845 CBY3A6NI87 242 aa3.37□□□□□ -1.87
LIMS1-214ENST00000542845 TMEM212A6NML5 194 aa3.37□□□□□ -1.87
LIMS1-214ENST00000542845 KNCNA6PVL3 124 aa3.37□□□□□ -1.87
LIMS1-214ENST00000542845 ZNF705EA8MWA4 302 aaPredicted RBP3.37□□□□□ -1.87
LIMS1-214ENST00000542845 E7EUB6 86 aa3.37□□□□□ -1.87
LIMS1-214ENST00000542845 E9PI62 339 aa3.37□□□□□ -1.87
LIMS1-214ENST00000542845 J3QRK9 145 aa3.37□□□□□ -1.87
LIMS1-214ENST00000542845 DYNC1I1O14576 645 aa3.37□□□□□ -1.87
LIMS1-214ENST00000542845 OGG1O15527 345 aa3.37□□□□□ -1.87
LIMS1-214ENST00000542845 PDCD6O75340 191 aa3.37□□□□□ -1.87
LIMS1-214ENST00000542845 YIF1AO95070 293 aa3.37□□□□□ -1.87
LIMS1-214ENST00000542845 NUDT3O95989 172 aa3.37□□□□□ -1.87
LIMS1-214ENST00000542845 CD2P06729 351 aa3.37□□□□□ -1.87
LIMS1-214ENST00000542845 GIG44P09565 113 aaPredicted RBP3.37□□□□□ -1.87
LIMS1-214ENST00000542845 SAA1P0DJI8 122 aaPredicted RBP3.37□□□□□ -1.87
LIMS1-214ENST00000542845 VPREB1P12018 145 aa3.37□□□□□ -1.87
LIMS1-214ENST00000542845 AREGP15514 252 aa3.37□□□□□ -1.87
LIMS1-214ENST00000542845 HIST1H1BP16401 226 aaKnown RBP3.37□□□□□ -1.87
LIMS1-214ENST00000542845 ANXA7P20073 488 aaKnown RBP3.37□□□□□ -1.87
LIMS1-214ENST00000542845 C4BPBP20851 252 aa3.37□□□□□ -1.87
LIMS1-214ENST00000542845 CRHBPP24387 322 aa3.37□□□□□ -1.87
LIMS1-214ENST00000542845 PSMB6P28072 239 aa3.37□□□□□ -1.87
LIMS1-214ENST00000542845 RPL27AP46776 148 aaKnown RBP3.37□□□□□ -1.87
LIMS1-214ENST00000542845 GTF2A1P52655 376 aaPredicted RBP3.37□□□□□ -1.87
LIMS1-214ENST00000542845 UBE2KP61086 200 aa3.37□□□□□ -1.87
LIMS1-214ENST00000542845 MS4A2Q01362 244 aa3.37□□□□□ -1.87
LIMS1-214ENST00000542845 CDK10Q15131 360 aa3.37□□□□□ -1.87
LIMS1-214ENST00000542845 C12orf73Q69YU5 71 aa3.37□□□□□ -1.87
LIMS1-214ENST00000542845 AWAT2Q6E213 333 aa3.37□□□□□ -1.87
LIMS1-214ENST00000542845 SIGIRRQ6IA17 410 aa3.37□□□□□ -1.87
LIMS1-214ENST00000542845 C6orf201Q7Z4U5 140 aa3.37□□□□□ -1.87
LIMS1-214ENST00000542845 MMD2Q8IY49 270 aa3.37□□□□□ -1.87
LIMS1-214ENST00000542845 VKORC1L1Q8N0U8 176 aa3.37□□□□□ -1.87
LIMS1-214ENST00000542845 TMEM190Q8WZ59 177 aa3.37□□□□□ -1.87
LIMS1-214ENST00000542845 RRNAD1Q96FB5 475 aaKnown RBP3.37□□□□□ -1.87
LIMS1-214ENST00000542845 CXorf58Q96LI9 332 aa3.37□□□□□ -1.87
LIMS1-214ENST00000542845 OR2A7Q96R45 310 aa3.37□□□□□ -1.87
LIMS1-214ENST00000542845 ZNF436Q9C0F3 470 aaPredicted RBP3.37□□□□□ -1.87
LIMS1-214ENST00000542845 OR2D2Q9H210 308 aa3.37□□□□□ -1.87
LIMS1-214ENST00000542845 RIBC2Q9H4K1 309 aa3.37□□□□□ -1.87
LIMS1-214ENST00000542845 SDHAF2Q9NX18 166 aa3.37□□□□□ -1.87
LIMS1-214ENST00000542845 RDH8Q9NYR8 311 aa3.37□□□□□ -1.87
LIMS1-214ENST00000542845 SMPXQ9UHP9 88 aa3.37□□□□□ -1.87
LIMS1-214ENST00000542845 RABAC1Q9UI14 185 aa3.37□□□□□ -1.87
LIMS1-214ENST00000542845 TRAV34A0A0B4J273 112 aa3.36□□□□□ -1.87
LIMS1-214ENST00000542845 IGHV3-66A0A0C4DH42 116 aa3.36□□□□□ -1.87
LIMS1-214ENST00000542845 IGHV7-4-1A0A0J9YVY3 117 aa3.36□□□□□ -1.87
LIMS1-214ENST00000542845 A0A1W2PPK0 400 aa3.36□□□□□ -1.87
LIMS1-214ENST00000542845 KRTAP29-1A8MX34 341 aaPredicted RBP3.36□□□□□ -1.87
LIMS1-214ENST00000542845 EBAG9O00559 213 aa3.36□□□□□ -1.87
LIMS1-214ENST00000542845 CHEK1O14757 476 aa3.36□□□□□ -1.87
LIMS1-214ENST00000542845 BET1O15155 118 aa3.36□□□□□ -1.87
LIMS1-214ENST00000542845 CREBL2O60519 120 aaPredicted RBP3.36□□□□□ -1.87
LIMS1-214ENST00000542845 CD3GP09693 182 aa3.36□□□□□ -1.87
LIMS1-214ENST00000542845 RRASP10301 218 aa3.36□□□□□ -1.87
LIMS1-214ENST00000542845 PRDX6P30041 224 aa3.36□□□□□ -1.87
LIMS1-214ENST00000542845 GBX2P52951 348 aaPredicted RBP3.36□□□□□ -1.87
LIMS1-214ENST00000542845 TPBGQ13641 420 aa3.36□□□□□ -1.87
LIMS1-214ENST00000542845 OR2B11Q5JQS5 317 aa3.36□□□□□ -1.87
LIMS1-214ENST00000542845 ACTL10Q5JWF8 245 aa3.36□□□□□ -1.87
LIMS1-214ENST00000542845 SLC25A24Q6NUK1 477 aa3.36□□□□□ -1.87
LIMS1-214ENST00000542845 MORN3Q6PF18 240 aaPredicted RBP3.36□□□□□ -1.87
LIMS1-214ENST00000542845 TCF24Q7RTU0 167 aa3.36□□□□□ -1.87
LIMS1-214ENST00000542845 NOXA1Q86UR1 476 aa3.36□□□□□ -1.87
LIMS1-214ENST00000542845 FAM24BQ8N5W8 94 aa3.36□□□□□ -1.87
LIMS1-214ENST00000542845 OR8J1Q8NGP2 316 aa3.36□□□□□ -1.87
LIMS1-214ENST00000542845 ZNRF2Q8NHG8 242 aa3.36□□□□□ -1.87
LIMS1-214ENST00000542845 ZNF502Q8TBZ5 544 aa3.36□□□□□ -1.87
LIMS1-214ENST00000542845 TMEM170AQ8WVE7 144 aa3.36□□□□□ -1.87
LIMS1-214ENST00000542845 CANT1Q8WVQ1 401 aa3.36□□□□□ -1.87
LIMS1-214ENST00000542845 MRPL48Q96GC5 212 aaKnown RBP3.36□□□□□ -1.87
LIMS1-214ENST00000542845 FAM210BQ96KR6 192 aa3.36□□□□□ -1.87
LIMS1-214ENST00000542845 NIPSNAP3BQ9BS92 247 aa3.36□□□□□ -1.87
LIMS1-214ENST00000542845 HDHD3Q9BSH5 251 aaPredicted RBP3.36□□□□□ -1.87
LIMS1-214ENST00000542845 MS4A6AQ9H2W1 248 aa3.36□□□□□ -1.87
LIMS1-214ENST00000542845 SLC2A9Q9NRM0 540 aa3.36□□□□□ -1.87
LIMS1-214ENST00000542845 SMPD3Q9NY59 655 aaPredicted RBP3.36□□□□□ -1.87
LIMS1-214ENST00000542845 XCL2Q9UBD3 114 aa3.36□□□□□ -1.87
LIMS1-214ENST00000542845 IGLV11-55A0A075B6I3 123 aa3.35□□□□□ -1.87
LIMS1-214ENST00000542845 TRBV5-7A0A0A0MS05 114 aa3.35□□□□□ -1.87
LIMS1-214ENST00000542845 K7EMT4 169 aa3.35□□□□□ -1.87
LIMS1-214ENST00000542845 NDUFA4O00483 81 aa3.35□□□□□ -1.87
LIMS1-214ENST00000542845 ITGB1BP1O14713 200 aa3.35□□□□□ -1.87
LIMS1-214ENST00000542845 NUPL2O15504 423 aaKnown RBP3.35□□□□□ -1.87
LIMS1-214ENST00000542845 ST8SIA3O43173 380 aa3.35□□□□□ -1.87
LIMS1-214ENST00000542845 FCGR3BO75015 233 aa3.35□□□□□ -1.87
LIMS1-214ENST00000542845 EIF4EP06730 217 aaKnown RBP3.35□□□□□ -1.87
LIMS1-214ENST00000542845 SPP1P10451 314 aa3.35□□□□□ -1.87
LIMS1-214ENST00000542845 HOXA5P20719 270 aa3.35□□□□□ -1.87
LIMS1-214ENST00000542845 MAS1LP35410 378 aa3.35□□□□□ -1.87
LIMS1-214ENST00000542845 POLR2IP36954 125 aaKnown RBP3.35□□□□□ -1.87
LIMS1-214ENST00000542845 CCL18P55774 89 aa3.35□□□□□ -1.87
LIMS1-214ENST00000542845 OR2B8PP59922 312 aa3.35□□□□□ -1.87
LIMS1-214ENST00000542845 KRTAP10-1P60331 282 aa3.35□□□□□ -1.87
LIMS1-214ENST00000542845 HLA-DRB3P79483 266 aa3.35□□□□□ -1.87
LIMS1-214ENST00000542845 FOXI1Q12951 378 aa3.35□□□□□ -1.87
LIMS1-214ENST00000542845 CLINT1Q14677 625 aa3.35□□□□□ -1.87
LIMS1-214ENST00000542845 Q56UQ5 140 aa3.35□□□□□ -1.87
LIMS1-214ENST00000542845 TMEM41BQ5BJD5 291 aa3.35□□□□□ -1.87
LIMS1-214ENST00000542845 OR2G6Q5TZ20 316 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms