RNA–Protein interactions for RNA: ENST00000542685.5

XRCC4-206, Transcript of X-ray repair cross complementing 4, humanhuman

TSL 1 (best)

Gene XRCC4, Length 1,243 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-206ENST00000542685 CTXND1A0A1B0GTU2 59 aa4.78□□□□□ -1.64
XRCC4-206ENST00000542685 A0A1B0GV50 99 aa4.78□□□□□ -1.64
XRCC4-206ENST00000542685 A0A1W2PS18 150 aa4.78□□□□□ -1.64
XRCC4-206ENST00000542685 TMEM8BA6NDV4 472 aa4.78□□□□□ -1.64
XRCC4-206ENST00000542685 LRRC30A6NM36 301 aa4.78□□□□□ -1.64
XRCC4-206ENST00000542685 TMEM14DPA8MWL7 114 aa4.78□□□□□ -1.64
XRCC4-206ENST00000542685 H0Y980 276 aa4.78□□□□□ -1.64
XRCC4-206ENST00000542685 IFNL4K9M1U5 179 aa4.78□□□□□ -1.64
XRCC4-206ENST00000542685 RER1O15258 196 aa4.78□□□□□ -1.64
XRCC4-206ENST00000542685 ERI3O43414 337 aaKnown RBP4.78□□□□□ -1.64
XRCC4-206ENST00000542685 NKX2-2O95096 273 aa4.78□□□□□ -1.64
XRCC4-206ENST00000542685 NUDT14O95848 222 aa4.78□□□□□ -1.64
XRCC4-206ENST00000542685 OR5AL1P0C617 328 aa4.78□□□□□ -1.64
XRCC4-206ENST00000542685 HIST1H1EP10412 219 aaKnown RBP4.78□□□□□ -1.64
XRCC4-206ENST00000542685 SLC25A6P12236 298 aa4.78□□□□□ -1.64
XRCC4-206ENST00000542685 HIST1H1CP16403 213 aaKnown RBP4.78□□□□□ -1.64
XRCC4-206ENST00000542685 ALOX5APP20292 161 aa4.78□□□□□ -1.64
XRCC4-206ENST00000542685 HTR1DP28221 377 aa4.78□□□□□ -1.64
XRCC4-206ENST00000542685 NKX2-1P43699 371 aaPredicted RBP4.78□□□□□ -1.64
XRCC4-206ENST00000542685 GPR1P46091 355 aa4.78□□□□□ -1.64
XRCC4-206ENST00000542685 OR3A4PP47883 348 aa4.78□□□□□ -1.64
XRCC4-206ENST00000542685 RPS15AP62244 130 aaKnown RBP4.78□□□□□ -1.64
XRCC4-206ENST00000542685 QRFPP83859 136 aa4.78□□□□□ -1.64
XRCC4-206ENST00000542685 ZNF141Q15928 474 aa4.78□□□□□ -1.64
XRCC4-206ENST00000542685 MEP1BQ16820 701 aa4.78□□□□□ -1.64
XRCC4-206ENST00000542685 DCAF12Q5T6F0 453 aa4.78□□□□□ -1.64
XRCC4-206ENST00000542685 TXNDC8Q6A555 127 aa4.78□□□□□ -1.64
XRCC4-206ENST00000542685 KCTD18Q6PI47 426 aaPredicted RBP4.78□□□□□ -1.64
XRCC4-206ENST00000542685 Q6Q795 121 aa4.78□□□□□ -1.64
XRCC4-206ENST00000542685 Q6ZS49 121 aa4.78□□□□□ -1.64
XRCC4-206ENST00000542685 BPIFA4PQ86YQ2 179 aa4.78□□□□□ -1.64
XRCC4-206ENST00000542685 SMIM20Q8N5G0 67 aa4.78□□□□□ -1.64
XRCC4-206ENST00000542685 LINC01555Q8NAE3 123 aa4.78□□□□□ -1.64
XRCC4-206ENST00000542685 OR4X2Q8NGF9 303 aa4.78□□□□□ -1.64
XRCC4-206ENST00000542685 OR10D3Q8NH80 312 aa4.78□□□□□ -1.64
XRCC4-206ENST00000542685 OR1L1Q8NH94 360 aa4.78□□□□□ -1.64
XRCC4-206ENST00000542685 MRAPQ8TCY5 172 aa4.78□□□□□ -1.64
XRCC4-206ENST00000542685 TMEM54Q969K7 222 aa4.78□□□□□ -1.64
XRCC4-206ENST00000542685 ADTRPQ96IZ2 230 aa4.78□□□□□ -1.64
XRCC4-206ENST00000542685 NDFIP1Q9BT67 221 aa4.78□□□□□ -1.64
XRCC4-206ENST00000542685 TMEM70Q9BUB7 260 aa4.78□□□□□ -1.64
XRCC4-206ENST00000542685 SPRY4Q9C004 299 aa4.78□□□□□ -1.64
XRCC4-206ENST00000542685 ZNF665Q9H7R5 613 aa4.78□□□□□ -1.64
XRCC4-206ENST00000542685 ZNF286AQ9HBT8 521 aa4.78□□□□□ -1.64
XRCC4-206ENST00000542685 LYRM4Q9HD34 91 aa4.78□□□□□ -1.64
XRCC4-206ENST00000542685 SCRT2Q9NQ03 307 aa4.78□□□□□ -1.64
XRCC4-206ENST00000542685 SPANXB1Q9NS25 103 aaPredicted RBP4.78□□□□□ -1.64
XRCC4-206ENST00000542685 VPREB3Q9UKI3 123 aa4.78□□□□□ -1.64
XRCC4-206ENST00000542685 RARRES3Q9UL19 164 aa4.78□□□□□ -1.64
XRCC4-206ENST00000542685 EML5Q05BV3 1969 aa4.78□□□□□ -1.64
XRCC4-206ENST00000542685 A0A1B0GWA3 101 aa4.77□□□□□ -1.65
XRCC4-206ENST00000542685 GRIFINA4D1Z8 144 aa4.77□□□□□ -1.65
XRCC4-206ENST00000542685 C4orf51C9J302 202 aa4.77□□□□□ -1.65
XRCC4-206ENST00000542685 TMEM262E9PQX1 116 aa4.77□□□□□ -1.65
XRCC4-206ENST00000542685 FCN1O00602 326 aa4.77□□□□□ -1.65
XRCC4-206ENST00000542685 PLPP3O14495 311 aa4.77□□□□□ -1.65
XRCC4-206ENST00000542685 ISLRO14498 428 aa4.77□□□□□ -1.65
XRCC4-206ENST00000542685 SNAI2O43623 268 aa4.77□□□□□ -1.65
XRCC4-206ENST00000542685 LMX1BO60663 402 aa4.77□□□□□ -1.65
XRCC4-206ENST00000542685 GAGE7O76087 117 aa4.77□□□□□ -1.65
XRCC4-206ENST00000542685 SP1P08047 785 aa4.77□□□□□ -1.65
XRCC4-206ENST00000542685 GAGE12FP0CL80 117 aa4.77□□□□□ -1.65
XRCC4-206ENST00000542685 GAGE12GP0CL81 117 aa4.77□□□□□ -1.65
XRCC4-206ENST00000542685 GAGE12IP0CL82 117 aa4.77□□□□□ -1.65
XRCC4-206ENST00000542685 IGHV4-30-4P0DP06 118 aa4.77□□□□□ -1.65
XRCC4-206ENST00000542685 COX8AP10176 69 aa4.77□□□□□ -1.65
XRCC4-206ENST00000542685 PEBP1P30086 187 aaKnown RBP4.77□□□□□ -1.65
XRCC4-206ENST00000542685 ID1P41134 155 aa4.77□□□□□ -1.65
XRCC4-206ENST00000542685 ZNF83P51522 516 aa4.77□□□□□ -1.65
XRCC4-206ENST00000542685 OR1D5P58170 312 aa4.77□□□□□ -1.65
XRCC4-206ENST00000542685 HBG1P69891 147 aa4.77□□□□□ -1.65
XRCC4-206ENST00000542685 HBG2P69892 147 aa4.77□□□□□ -1.65
XRCC4-206ENST00000542685 NTHL1P78549 312 aa4.77□□□□□ -1.65
XRCC4-206ENST00000542685 GAGE4Q13068 117 aa4.77□□□□□ -1.65
XRCC4-206ENST00000542685 KLF5Q13887 457 aaPredicted RBP4.77□□□□□ -1.65
XRCC4-206ENST00000542685 ZNF77Q15935 545 aa4.77□□□□□ -1.65
XRCC4-206ENST00000542685 PDLIM3Q53GG5 364 aaPredicted RBP4.77□□□□□ -1.65
XRCC4-206ENST00000542685 WDR38Q5JTN6 314 aa4.77□□□□□ -1.65
XRCC4-206ENST00000542685 C1orf140Q5VVS0 124 aa4.77□□□□□ -1.65
XRCC4-206ENST00000542685 PLPP4Q5VZY2 271 aa4.77□□□□□ -1.65
XRCC4-206ENST00000542685 ZFAND6Q6FIF0 208 aa4.77□□□□□ -1.65
XRCC4-206ENST00000542685 LCN10Q6JVE6 187 aa4.77□□□□□ -1.65
XRCC4-206ENST00000542685 TRAT1Q6PIZ9 186 aa4.77□□□□□ -1.65
XRCC4-206ENST00000542685 H2BFWTQ7Z2G1 175 aa4.77□□□□□ -1.65
XRCC4-206ENST00000542685 MEX3DQ86XN8 651 aaKnown RBP4.77□□□□□ -1.65
XRCC4-206ENST00000542685 CA13Q8N1Q1 262 aa4.77□□□□□ -1.65
XRCC4-206ENST00000542685 C2orf73Q8N5S3 287 aaPredicted RBP4.77□□□□□ -1.65
XRCC4-206ENST00000542685 GVQW1Q8N7I0 195 aa4.77□□□□□ -1.65
XRCC4-206ENST00000542685 OR5C1Q8NGR4 320 aa4.77□□□□□ -1.65
XRCC4-206ENST00000542685 OR10AC1Q8NH08 325 aa4.77□□□□□ -1.65
XRCC4-206ENST00000542685 OR4A5Q8NH83 315 aa4.77□□□□□ -1.65
XRCC4-206ENST00000542685 OR1L3Q8NH93 324 aa4.77□□□□□ -1.65
XRCC4-206ENST00000542685 ZNF721Q8TF20 911 aa4.77□□□□□ -1.65
XRCC4-206ENST00000542685 TM4SF19Q96DZ7 209 aa4.77□□□□□ -1.65
XRCC4-206ENST00000542685 RNF125Q96EQ8 232 aa4.77□□□□□ -1.65
XRCC4-206ENST00000542685 SLC25A44Q96H78 314 aaPredicted RBP4.77□□□□□ -1.65
XRCC4-206ENST00000542685 DGAT2Q96PD7 388 aa4.77□□□□□ -1.65
XRCC4-206ENST00000542685 RAB40CQ96S21 281 aa4.77□□□□□ -1.65
XRCC4-206ENST00000542685 LMF2Q9BU23 707 aaKnown RBP4.77□□□□□ -1.65
XRCC4-206ENST00000542685 CLEC7AQ9BXN2 247 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms