RNA–Protein interactions for RNA: ENST00000542641.5

YBX3-213, Transcript of Y-box binding protein 3, humanhuman

TSL 4

Gene YBX3, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-213ENST00000542641 ZNF429Q86V71 674 aa9.12□□□□□ -0.95
YBX3-213ENST00000542641 OR1S1Q8NH92 325 aa9.12□□□□□ -0.95
YBX3-213ENST00000542641 PDCD10Q9BUL8 212 aa9.12□□□□□ -0.95
YBX3-213ENST00000542641 COA4Q9NYJ1 87 aa9.12□□□□□ -0.95
YBX3-213ENST00000542641 ZNF257Q9Y2Q1 563 aa9.12□□□□□ -0.95
YBX3-213ENST00000542641 ALG5Q9Y673 324 aa9.12□□□□□ -0.95
YBX3-213ENST00000542641 FBN1P35555 2871 aaKnown RBP9.11□□□□□ -0.95
YBX3-213ENST00000542641 C13orf42A0A1B0GVH6 325 aa9.11□□□□□ -0.95
YBX3-213ENST00000542641 C7orf66A4D0T2 115 aa9.11□□□□□ -0.95
YBX3-213ENST00000542641 PSMB11A5LHX3 300 aa9.11□□□□□ -0.95
YBX3-213ENST00000542641 HMX3A6NHT5 357 aa9.11□□□□□ -0.95
YBX3-213ENST00000542641 CGB1A6NKQ9 187 aa9.11□□□□□ -0.95
YBX3-213ENST00000542641 MPTX1A8MV57 137 aa9.11□□□□□ -0.95
YBX3-213ENST00000542641 FAM25EA8MYX2 175 aa9.11□□□□□ -0.95
YBX3-213ENST00000542641 SLC25A6P12236 298 aa9.11□□□□□ -0.95
YBX3-213ENST00000542641 CRIP2P52943 208 aaPredicted RBP9.11□□□□□ -0.95
YBX3-213ENST00000542641 SLC35B1P78383 322 aa9.11□□□□□ -0.95
YBX3-213ENST00000542641 KLHDC1Q8N7A1 406 aa9.11□□□□□ -0.95
YBX3-213ENST00000542641 TMEM68Q96MH6 324 aa9.11□□□□□ -0.95
YBX3-213ENST00000542641 WNT10AQ9GZT5 417 aa9.11□□□□□ -0.95
YBX3-213ENST00000542641 NDUFA4L2Q9NRX3 87 aa9.11□□□□□ -0.95
YBX3-213ENST00000542641 CACFD1Q9UGQ2 172 aa9.11□□□□□ -0.95
YBX3-213ENST00000542641 ZNF580Q9UK33 172 aa9.11□□□□□ -0.95
YBX3-213ENST00000542641 A0A1B0GW64 132 aa9.1□□□□□ -0.95
YBX3-213ENST00000542641 A0A1W2PN81 502 aa9.1□□□□□ -0.95
YBX3-213ENST00000542641 C5orf51A6NDU8 294 aa9.1□□□□□ -0.95
YBX3-213ENST00000542641 TEX22C9J3V5 150 aa9.1□□□□□ -0.95
YBX3-213ENST00000542641 CCSO14618 274 aa9.1□□□□□ -0.95
YBX3-213ENST00000542641 NXPH3O95157 252 aa9.1□□□□□ -0.95
YBX3-213ENST00000542641 CHRNA7P36544 502 aa9.1□□□□□ -0.95
YBX3-213ENST00000542641 PROK1P58294 105 aa9.1□□□□□ -0.95
YBX3-213ENST00000542641 PRCDQ00LT1 54 aa9.1□□□□□ -0.95
YBX3-213ENST00000542641 IAH1Q2TAA2 248 aaPredicted RBP9.1□□□□□ -0.95
YBX3-213ENST00000542641 AARDQ4LEZ3 155 aa9.1□□□□□ -0.95
YBX3-213ENST00000542641 AWAT1Q58HT5 328 aa9.1□□□□□ -0.95
YBX3-213ENST00000542641 LCE2AQ5TA79 106 aaPredicted RBP9.1□□□□□ -0.95
YBX3-213ENST00000542641 ASPHD1Q5U4P2 390 aa9.1□□□□□ -0.95
YBX3-213ENST00000542641 ZNF329Q86UD4 541 aa9.1□□□□□ -0.95
YBX3-213ENST00000542641 OR5T1Q8NG75 326 aa9.1□□□□□ -0.95
YBX3-213ENST00000542641 OR5AU1Q8NGC0 362 aa9.1□□□□□ -0.95
YBX3-213ENST00000542641 OR10W1Q8NGF6 305 aa9.1□□□□□ -0.95
YBX3-213ENST00000542641 OR52E5Q8NH55 327 aa9.1□□□□□ -0.95
YBX3-213ENST00000542641 SRSF8Q9BRL6 282 aaKnown RBP9.1□□□□□ -0.95
YBX3-213ENST00000542641 ATRQ13535 2644 aa9.1□□□□□ -0.95
YBX3-213ENST00000542641 IGLC7A0M8Q6 106 aa9.09□□□□□ -0.95
YBX3-213ENST00000542641 GOSR2O14653 212 aa9.09□□□□□ -0.95
YBX3-213ENST00000542641 PITX3O75364 302 aa9.09□□□□□ -0.95
YBX3-213ENST00000542641 REG1AP05451 166 aa9.09□□□□□ -0.95
YBX3-213ENST00000542641 AREGP15514 252 aa9.09□□□□□ -0.95
YBX3-213ENST00000542641 PPIFP30405 207 aaKnown RBP9.09□□□□□ -0.95
YBX3-213ENST00000542641 SPCS3P61009 180 aa9.09□□□□□ -0.95
YBX3-213ENST00000542641 CFHR3Q02985 330 aa9.09□□□□□ -0.95
YBX3-213ENST00000542641 C2orf68Q2NKX9 166 aa9.09□□□□□ -0.95
YBX3-213ENST00000542641 C19orf54Q5BKX5 351 aa9.09□□□□□ -0.95
YBX3-213ENST00000542641 SPINK9Q5DT21 86 aa9.09□□□□□ -0.95
YBX3-213ENST00000542641 TEX38Q6PEX7 206 aa9.09□□□□□ -0.95
YBX3-213ENST00000542641 C10orf99Q6UWK7 81 aa9.09□□□□□ -0.95
YBX3-213ENST00000542641 GSG1LQ6UXU4 331 aa9.09□□□□□ -0.95
YBX3-213ENST00000542641 HSD17B13Q7Z5P4 300 aaPredicted RBP9.09□□□□□ -0.95
YBX3-213ENST00000542641 MRPL41Q8IXM3 137 aaKnown RBP9.09□□□□□ -0.95
YBX3-213ENST00000542641 OR5M8Q8NGP6 311 aa9.09□□□□□ -0.95
YBX3-213ENST00000542641 OR10C1Q96KK4 312 aa9.09□□□□□ -0.95
YBX3-213ENST00000542641 PLEKHA3Q9HB20 300 aa9.09□□□□□ -0.95
YBX3-213ENST00000542641 ENY2Q9NPA8 101 aa9.09□□□□□ -0.95
YBX3-213ENST00000542641 GSKIPQ9P0R6 139 aa9.09□□□□□ -0.95
YBX3-213ENST00000542641 PLXNB1O43157 2135 aa9.08□□□□□ -0.96
YBX3-213ENST00000542641 CEBPZOSA8MTT3 80 aa9.08□□□□□ -0.96
YBX3-213ENST00000542641 OR13C7P0DN81 318 aa9.08□□□□□ -0.96
YBX3-213ENST00000542641 DEFA4P12838 97 aa9.08□□□□□ -0.96
YBX3-213ENST00000542641 PSMB6P28072 239 aa9.08□□□□□ -0.96
YBX3-213ENST00000542641 HOXA1P49639 335 aaPredicted RBP9.08□□□□□ -0.96
YBX3-213ENST00000542641 ERHP84090 104 aaKnown RBP9.08□□□□□ -0.96
YBX3-213ENST00000542641 WT1-ASQ06250 92 aa9.08□□□□□ -0.96
YBX3-213ENST00000542641 TNFRSF9Q07011 255 aa9.08□□□□□ -0.96
YBX3-213ENST00000542641 PDLIM3Q53GG5 364 aaPredicted RBP9.08□□□□□ -0.96
YBX3-213ENST00000542641 CXorf66Q5JRM2 361 aaPredicted RBP9.08□□□□□ -0.96
YBX3-213ENST00000542641 LCE2CQ5TA81 110 aa9.08□□□□□ -0.96
YBX3-213ENST00000542641 TTC9CQ8N5M4 171 aa9.08□□□□□ -0.96
YBX3-213ENST00000542641 ZBTB8BQ8NAP8 495 aaPredicted RBP9.08□□□□□ -0.96
YBX3-213ENST00000542641 MED28Q9H204 178 aa9.08□□□□□ -0.96
YBX3-213ENST00000542641 ZNF355PQ9NSJ1 428 aa9.08□□□□□ -0.96
YBX3-213ENST00000542641 MGAT4CQ9UBM8 478 aa9.08□□□□□ -0.96
YBX3-213ENST00000542641 HSPB7Q9UBY9 170 aa9.08□□□□□ -0.96
YBX3-213ENST00000542641 TNCP24821 2201 aa9.08□□□□□ -0.96
YBX3-213ENST00000542641 NPIPB5A8MRT5 1133 aa9.07□□□□□ -0.96
YBX3-213ENST00000542641 FAM90A26D6RGX4 464 aa9.07□□□□□ -0.96
YBX3-213ENST00000542641 SOX15O60248 233 aa9.07□□□□□ -0.96
YBX3-213ENST00000542641 SIX6O95475 246 aa9.07□□□□□ -0.96
YBX3-213ENST00000542641 IGLV1-40P01703 118 aa9.07□□□□□ -0.96
YBX3-213ENST00000542641 IGHG4P01861 327 aa9.07□□□□□ -0.96
YBX3-213ENST00000542641 CRYGCP07315 174 aa9.07□□□□□ -0.96
YBX3-213ENST00000542641 PF4V1P10720 104 aa9.07□□□□□ -0.96
YBX3-213ENST00000542641 NKX2-1P43699 371 aaPredicted RBP9.07□□□□□ -0.96
YBX3-213ENST00000542641 FOXE3Q13461 319 aa9.07□□□□□ -0.96
YBX3-213ENST00000542641 TMEM65Q6PI78 240 aa9.07□□□□□ -0.96
YBX3-213ENST00000542641 C12orf54Q6X4T0 127 aa9.07□□□□□ -0.96
YBX3-213ENST00000542641 COMMD1Q8N668 190 aa9.07□□□□□ -0.96
YBX3-213ENST00000542641 C11orf44Q8N8P7 122 aa9.07□□□□□ -0.96
YBX3-213ENST00000542641 OR4X2Q8NGF9 303 aa9.07□□□□□ -0.96
YBX3-213ENST00000542641 OR4D5Q8NGN0 318 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms