RNA–Protein interactions for RNA: ENST00000542495.5

ATPAF1-212, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-212ENST00000542495 CRYAAP02489 173 aa4.27□□□□□ -1.73
ATPAF1-212ENST00000542495 ARL14EPLP0DKL9 152 aa4.27□□□□□ -1.73
ATPAF1-212ENST00000542495 WT1P19544 449 aaPredicted RBP4.27□□□□□ -1.73
ATPAF1-212ENST00000542495 DDTP30046 118 aa4.27□□□□□ -1.73
ATPAF1-212ENST00000542495 CCKARP32238 428 aa4.27□□□□□ -1.73
ATPAF1-212ENST00000542495 CHRNA7P36544 502 aa4.27□□□□□ -1.73
ATPAF1-212ENST00000542495 GATA4P43694 442 aa4.27□□□□□ -1.73
ATPAF1-212ENST00000542495 RAB7AP51149 207 aa4.27□□□□□ -1.73
ATPAF1-212ENST00000542495 CCL11P51671 97 aa4.27□□□□□ -1.73
ATPAF1-212ENST00000542495 YPEL3P61236 119 aaPredicted RBP4.27□□□□□ -1.73
ATPAF1-212ENST00000542495 ERVK-16P61578 105 aa4.27□□□□□ -1.73
ATPAF1-212ENST00000542495 SPRNQ5BIV9 151 aa4.27□□□□□ -1.73
ATPAF1-212ENST00000542495 CT45A1Q5HYN5 189 aa4.27□□□□□ -1.73
ATPAF1-212ENST00000542495 UTF1Q5T230 341 aa4.27□□□□□ -1.73
ATPAF1-212ENST00000542495 MIC13Q5XKP0 118 aa4.27□□□□□ -1.73
ATPAF1-212ENST00000542495 LRP11Q86VZ4 500 aa4.27□□□□□ -1.73
ATPAF1-212ENST00000542495 ZNF114Q8NC26 417 aa4.27□□□□□ -1.73
ATPAF1-212ENST00000542495 ZNF439Q8NDP4 499 aa4.27□□□□□ -1.73
ATPAF1-212ENST00000542495 OR4S2Q8NH73 311 aa4.27□□□□□ -1.73
ATPAF1-212ENST00000542495 CT45A3Q8NHU0 189 aa4.27□□□□□ -1.73
ATPAF1-212ENST00000542495 MBD3L2Q8NHZ7 208 aaPredicted RBP4.27□□□□□ -1.73
ATPAF1-212ENST00000542495 C11orf52Q96A22 123 aa4.27□□□□□ -1.73
ATPAF1-212ENST00000542495 S1PR3Q99500 378 aa4.27□□□□□ -1.73
ATPAF1-212ENST00000542495 TMEM204Q9BSN7 226 aa4.27□□□□□ -1.73
ATPAF1-212ENST00000542495 DERL1Q9BUN8 251 aa4.27□□□□□ -1.73
ATPAF1-212ENST00000542495 OPN3Q9H1Y3 402 aaPredicted RBP4.27□□□□□ -1.73
ATPAF1-212ENST00000542495 LINC00574Q9H8X3 128 aa4.27□□□□□ -1.73
ATPAF1-212ENST00000542495 NPVFQ9HCQ7 196 aa4.27□□□□□ -1.73
ATPAF1-212ENST00000542495 ASCL3Q9NQ33 180 aa4.27□□□□□ -1.73
ATPAF1-212ENST00000542495 HEYLQ9NQ87 328 aaPredicted RBP4.27□□□□□ -1.73
ATPAF1-212ENST00000542495 TMEM14BQ9NUH8 114 aa4.27□□□□□ -1.73
ATPAF1-212ENST00000542495 CALYQ9NYX4 217 aa4.27□□□□□ -1.73
ATPAF1-212ENST00000542495 PROCRQ9UNN8 238 aa4.27□□□□□ -1.73
ATPAF1-212ENST00000542495 FUT9Q9Y231 359 aa4.27□□□□□ -1.73
ATPAF1-212ENST00000542495 PXMP4Q9Y6I8 212 aa4.27□□□□□ -1.73
ATPAF1-212ENST00000542495 CEP295Q9C0D2 2601 aa4.26□□□□□ -1.73
ATPAF1-212ENST00000542495 IGLV3-9A0A075B6K5 115 aa4.26□□□□□ -1.73
ATPAF1-212ENST00000542495 TRAV9-1A0A075B6T8 112 aa4.26□□□□□ -1.73
ATPAF1-212ENST00000542495 FAM90A27PA6NNH2 459 aa4.26□□□□□ -1.73
ATPAF1-212ENST00000542495 A8MWP6 167 aa4.26□□□□□ -1.73
ATPAF1-212ENST00000542495 TSTD3H0UI37 97 aa4.26□□□□□ -1.73
ATPAF1-212ENST00000542495 GCHFRP30047 84 aa4.26□□□□□ -1.73
ATPAF1-212ENST00000542495 GLRXP35754 106 aa4.26□□□□□ -1.73
ATPAF1-212ENST00000542495 RPL29P47914 159 aaKnown RBP4.26□□□□□ -1.73
ATPAF1-212ENST00000542495 THBS3P49746 956 aa4.26□□□□□ -1.73
ATPAF1-212ENST00000542495 CNN1P51911 297 aaKnown RBP4.26□□□□□ -1.73
ATPAF1-212ENST00000542495 UBE2G2P60604 165 aa4.26□□□□□ -1.73
ATPAF1-212ENST00000542495 HSPE1P61604 102 aaKnown RBP4.26□□□□□ -1.73
ATPAF1-212ENST00000542495 SRSF6Q13247 344 aaKnown RBP4.26□□□□□ -1.73
ATPAF1-212ENST00000542495 PRSS8Q16651 343 aa4.26□□□□□ -1.73
ATPAF1-212ENST00000542495 LTC4SQ16873 150 aa4.26□□□□□ -1.73
ATPAF1-212ENST00000542495 CLEC12BQ2HXU8 276 aa4.26□□□□□ -1.73
ATPAF1-212ENST00000542495 TMEM30BQ3MIR4 351 aa4.26□□□□□ -1.73
ATPAF1-212ENST00000542495 TIMM23BQ5SRD1 257 aa4.26□□□□□ -1.73
ATPAF1-212ENST00000542495 FAM78BQ5VT40 261 aa4.26□□□□□ -1.73
ATPAF1-212ENST00000542495 CST9LP1Q5W188 147 aa4.26□□□□□ -1.73
ATPAF1-212ENST00000542495 ZNF600Q6ZNG1 722 aa4.26□□□□□ -1.73
ATPAF1-212ENST00000542495 SSX9Q7RTT3 188 aa4.26□□□□□ -1.73
ATPAF1-212ENST00000542495 KRTAP19-1Q8IUB9 90 aa4.26□□□□□ -1.73
ATPAF1-212ENST00000542495 VKORC1L1Q8N0U8 176 aa4.26□□□□□ -1.73
ATPAF1-212ENST00000542495 ABHD12Q8N2K0 398 aa4.26□□□□□ -1.73
ATPAF1-212ENST00000542495 GBGT1Q8N5D6 347 aa4.26□□□□□ -1.73
ATPAF1-212ENST00000542495 TMEM37Q8WXS4 190 aa4.26□□□□□ -1.73
ATPAF1-212ENST00000542495 NEUROG1Q92886 237 aa4.26□□□□□ -1.73
ATPAF1-212ENST00000542495 SDSLQ96GA7 329 aa4.26□□□□□ -1.73
ATPAF1-212ENST00000542495 SFRP2Q96HF1 295 aa4.26□□□□□ -1.73
ATPAF1-212ENST00000542495 ADTRPQ96IZ2 230 aa4.26□□□□□ -1.73
ATPAF1-212ENST00000542495 NOL4LQ96MY1 436 aaPredicted RBP4.26□□□□□ -1.73
ATPAF1-212ENST00000542495 OR2V2Q96R30 315 aa4.26□□□□□ -1.73
ATPAF1-212ENST00000542495 SFXN3Q9BWM7 321 aa4.26□□□□□ -1.73
ATPAF1-212ENST00000542495 PATZ1Q9HBE1 687 aaKnown RBP4.26□□□□□ -1.73
ATPAF1-212ENST00000542495 RAB9BQ9NP90 201 aa4.26□□□□□ -1.73
ATPAF1-212ENST00000542495 ELOVL5Q9NYP7 299 aa4.26□□□□□ -1.73
ATPAF1-212ENST00000542495 YTHDF2Q9Y5A9 579 aaKnown RBP4.26□□□□□ -1.73
ATPAF1-212ENST00000542495 LY96Q9Y6Y9 160 aa4.26□□□□□ -1.73
ATPAF1-212ENST00000542495 ARL2-SNX15V9GYD0 113 aa4.26□□□□□ -1.73
ATPAF1-212ENST00000542495 DOCK11Q5JSL3 2073 aa4.26□□□□□ -1.73
ATPAF1-212ENST00000542495 HCFC1P51610 2035 aa4.26□□□□□ -1.73
ATPAF1-212ENST00000542495 TET2Q6N021 2002 aaPredicted RBP4.26□□□□□ -1.73
ATPAF1-212ENST00000542495 IGHV3OR15-7A0A075B7D8 119 aa4.25□□□□□ -1.73
ATPAF1-212ENST00000542495 A0A087X0M5 115 aa4.25□□□□□ -1.73
ATPAF1-212ENST00000542495 SAA2-SAA4A0A096LPE2 208 aa4.25□□□□□ -1.73
ATPAF1-212ENST00000542495 TRGV10A0A0A0MS01 117 aa4.25□□□□□ -1.73
ATPAF1-212ENST00000542495 KBTBD11-OT1A0A1B0GTJ5 212 aa4.25□□□□□ -1.73
ATPAF1-212ENST00000542495 A0A1B0GX30 115 aa4.25□□□□□ -1.73
ATPAF1-212ENST00000542495 SCO2A0A1W2PP80 73 aa4.25□□□□□ -1.73
ATPAF1-212ENST00000542495 C9JCJ5 164 aa4.25□□□□□ -1.73
ATPAF1-212ENST00000542495 LINC00869P0C866 280 aa4.25□□□□□ -1.73
ATPAF1-212ENST00000542495 SAA2P0DJI9 122 aaPredicted RBP4.25□□□□□ -1.73
ATPAF1-212ENST00000542495 AREGP15514 252 aa4.25□□□□□ -1.73
ATPAF1-212ENST00000542495 NPY1RP25929 384 aa4.25□□□□□ -1.73
ATPAF1-212ENST00000542495 TIMP3P35625 211 aa4.25□□□□□ -1.73
ATPAF1-212ENST00000542495 SELENOTP62341 195 aa4.25□□□□□ -1.73
ATPAF1-212ENST00000542495 RHOBP62745 196 aa4.25□□□□□ -1.73
ATPAF1-212ENST00000542495 EFNB3Q15768 340 aa4.25□□□□□ -1.73
ATPAF1-212ENST00000542495 STUMQ69YW2 141 aa4.25□□□□□ -1.73
ATPAF1-212ENST00000542495 OR4A47Q6IF82 309 aa4.25□□□□□ -1.73
ATPAF1-212ENST00000542495 TEX38Q6PEX7 206 aa4.25□□□□□ -1.73
ATPAF1-212ENST00000542495 TEPPQ6URK8 271 aa4.25□□□□□ -1.73
ATPAF1-212ENST00000542495 TCF23Q7RTU1 214 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms