RNA–Protein interactions for RNA: ENST00000542274.5

CDH3-203, Transcript of cadherin 3, humanhuman

TSL 2

Gene CDH3, Length 2,746 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-203ENST00000542274 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.3□□□□□ -0.92
CDH3-203ENST00000542274 OR5H2Q8NGV7 314 aa9.3□□□□□ -0.92
CDH3-203ENST00000542274 OR51E1Q8TCB6 317 aa9.3□□□□□ -0.92
CDH3-203ENST00000542274 RAB40CQ96S21 281 aa9.3□□□□□ -0.92
CDH3-203ENST00000542274 PBOV1Q9GZY1 135 aa9.3□□□□□ -0.92
CDH3-203ENST00000542274 RAB9BQ9NP90 201 aa9.3□□□□□ -0.92
CDH3-203ENST00000542274 A0A0J9YW62 118 aa9.29□□□□□ -0.92
CDH3-203ENST00000542274 F2Z2F3 143 aa9.29□□□□□ -0.92
CDH3-203ENST00000542274 HPNP05981 417 aa9.29□□□□□ -0.92
CDH3-203ENST00000542274 HIST1H1EP10412 219 aaKnown RBP9.29□□□□□ -0.92
CDH3-203ENST00000542274 CRISP2P16562 243 aa9.29□□□□□ -0.92
CDH3-203ENST00000542274 IGFBP3P17936 291 aaPredicted RBP9.29□□□□□ -0.92
CDH3-203ENST00000542274 RPL7P18124 248 aaKnown RBP9.29□□□□□ -0.92
CDH3-203ENST00000542274 THBS3P49746 956 aa9.29□□□□□ -0.92
CDH3-203ENST00000542274 EIF3IQ13347 325 aaKnown RBP9.29□□□□□ -0.92
CDH3-203ENST00000542274 FAM166AQ6J272 317 aa9.29□□□□□ -0.92
CDH3-203ENST00000542274 ZFP62Q8NB50 900 aaPredicted RBP9.29□□□□□ -0.92
CDH3-203ENST00000542274 SRXN1Q9BYN0 137 aa9.29□□□□□ -0.92
CDH3-203ENST00000542274 ZNF708P17019 499 aa9.29□□□□□ -0.92
CDH3-203ENST00000542274 VDAC1P21796 283 aa9.29□□□□□ -0.92
CDH3-203ENST00000542274 NTF4P34130 210 aa9.29□□□□□ -0.92
CDH3-203ENST00000542274 SSBP1Q04837 148 aaKnown RBP9.29□□□□□ -0.92
CDH3-203ENST00000542274 LRRC75BQ2VPJ9 315 aa9.29□□□□□ -0.92
CDH3-203ENST00000542274 ZNF627Q7L945 461 aa9.29□□□□□ -0.92
CDH3-203ENST00000542274 LRRC75A-AS1Q8N1F1 130 aa9.29□□□□□ -0.92
CDH3-203ENST00000542274 OR5D14Q8NGL3 314 aa9.29□□□□□ -0.92
CDH3-203ENST00000542274 VSTM2AQ8TAG5 236 aa9.29□□□□□ -0.92
CDH3-203ENST00000542274 MRAPQ8TCY5 172 aa9.29□□□□□ -0.92
CDH3-203ENST00000542274 C2orf50Q96LR7 162 aa9.29□□□□□ -0.92
CDH3-203ENST00000542274 DEPPQ9NTK1 212 aa9.29□□□□□ -0.92
CDH3-203ENST00000542274 PRR13Q9NZ81 148 aa9.29□□□□□ -0.92
CDH3-203ENST00000542274 PINLYPA6NC86 204 aa9.28□□□□□ -0.92
CDH3-203ENST00000542274 ISLRO14498 428 aa9.28□□□□□ -0.92
CDH3-203ENST00000542274 ZNHIT1O43257 154 aa9.28□□□□□ -0.92
CDH3-203ENST00000542274 LINC00869P0C866 280 aa9.28□□□□□ -0.92
CDH3-203ENST00000542274 CT45A10P0DMU9 189 aa9.28□□□□□ -0.92
CDH3-203ENST00000542274 KIR2DL2P43627 348 aaPredicted RBP9.28□□□□□ -0.92
CDH3-203ENST00000542274 FUT6P51993 359 aa9.28□□□□□ -0.92
CDH3-203ENST00000542274 LCN12Q6JVE5 192 aa9.28□□□□□ -0.92
CDH3-203ENST00000542274 SLC25A47Q6Q0C1 308 aa9.28□□□□□ -0.92
CDH3-203ENST00000542274 ZNF841Q6ZN19 808 aa9.28□□□□□ -0.92
CDH3-203ENST00000542274 CENPVQ7Z7K6 275 aaPredicted RBP9.28□□□□□ -0.92
CDH3-203ENST00000542274 ZADH2Q8N4Q0 377 aa9.28□□□□□ -0.92
CDH3-203ENST00000542274 POC1AQ8NBT0 407 aa9.28□□□□□ -0.92
CDH3-203ENST00000542274 DNAJC30Q96LL9 226 aa9.28□□□□□ -0.92
CDH3-203ENST00000542274 LOC102723971A0A1B0GUV8 181 aa9.28□□□□□ -0.92
CDH3-203ENST00000542274 NPIPB13A6NJU9 1138 aa9.28□□□□□ -0.92
CDH3-203ENST00000542274 NPIPB4C9JG80 1138 aa9.28□□□□□ -0.92
CDH3-203ENST00000542274 K7EN84 100 aa9.28□□□□□ -0.92
CDH3-203ENST00000542274 VDAC2P45880 294 aaPredicted RBP9.28□□□□□ -0.92
CDH3-203ENST00000542274 PDCD1Q15116 288 aa9.28□□□□□ -0.92
CDH3-203ENST00000542274 HES7Q9BYE0 225 aa9.28□□□□□ -0.92
CDH3-203ENST00000542274 CKLFQ9UBR5 152 aa9.28□□□□□ -0.92
CDH3-203ENST00000542274 ZNF835Q9Y2P0 537 aa9.28□□□□□ -0.92
CDH3-203ENST00000542274 INSIG2Q9Y5U4 225 aa9.28□□□□□ -0.92
CDH3-203ENST00000542274 DCHS1Q96JQ0 3298 aa9.28□□□□□ -0.92
CDH3-203ENST00000542274 CENPVL3A0A0U1RRI6 287 aa9.27□□□□□ -0.92
CDH3-203ENST00000542274 LOC107984640A0A0U1RRK4 108 aa9.27□□□□□ -0.92
CDH3-203ENST00000542274 C17orf112F2Z3M2 114 aa9.27□□□□□ -0.92
CDH3-203ENST00000542274 NBL1P41271 181 aa9.27□□□□□ -0.92
CDH3-203ENST00000542274 LHX2P50458 406 aa9.27□□□□□ -0.92
CDH3-203ENST00000542274 SPINK14Q6IE38 97 aa9.27□□□□□ -0.92
CDH3-203ENST00000542274 KCNIP4Q6PIL6 250 aa9.27□□□□□ -0.92
CDH3-203ENST00000542274 SPATA12Q7Z6I5 190 aa9.27□□□□□ -0.92
CDH3-203ENST00000542274 SGPP2Q8IWX5 399 aa9.27□□□□□ -0.92
CDH3-203ENST00000542274 RNF152Q8N8N0 203 aa9.27□□□□□ -0.92
CDH3-203ENST00000542274 OSR1Q8TAX0 266 aaPredicted RBP9.27□□□□□ -0.92
CDH3-203ENST00000542274 TRGV10A0A0A0MS01 117 aa9.27□□□□□ -0.93
CDH3-203ENST00000542274 A0A1W2PP11 408 aa9.27□□□□□ -0.93
CDH3-203ENST00000542274 DHHO43323 396 aa9.27□□□□□ -0.93
CDH3-203ENST00000542274 AADACP22760 399 aa9.27□□□□□ -0.93
CDH3-203ENST00000542274 PPIFP30405 207 aaKnown RBP9.27□□□□□ -0.93
CDH3-203ENST00000542274 FOXG1P55316 489 aaPredicted RBP9.27□□□□□ -0.93
CDH3-203ENST00000542274 PSG7Q13046 419 aa9.27□□□□□ -0.93
CDH3-203ENST00000542274 Q6ZUT4 128 aa9.27□□□□□ -0.93
CDH3-203ENST00000542274 FAM57BQ71RH2 274 aa9.27□□□□□ -0.93
CDH3-203ENST00000542274 TCF23Q7RTU1 214 aa9.27□□□□□ -0.93
CDH3-203ENST00000542274 LHX4Q969G2 390 aa9.27□□□□□ -0.93
CDH3-203ENST00000542274 RBMXL1Q96E39 390 aaKnown RBP9.27□□□□□ -0.93
CDH3-203ENST00000542274 C20orf78Q9BR46 151 aa9.27□□□□□ -0.93
CDH3-203ENST00000542274 ST6GALNAC5Q9BVH7 336 aa9.27□□□□□ -0.93
CDH3-203ENST00000542274 CDIP1Q9H305 208 aa9.27□□□□□ -0.93
CDH3-203ENST00000542274 H3BRM9 83 aa9.26□□□□□ -0.93
CDH3-203ENST00000542274 OR7C1O76099 320 aaPredicted RBP9.26□□□□□ -0.93
CDH3-203ENST00000542274 ISG15P05161 165 aa9.26□□□□□ -0.93
CDH3-203ENST00000542274 PATE4P0C8F1 98 aa9.26□□□□□ -0.93
CDH3-203ENST00000542274 FSTP19883 344 aa9.26□□□□□ -0.93
CDH3-203ENST00000542274 XGP55808 180 aa9.26□□□□□ -0.93
CDH3-203ENST00000542274 DSCR4P56555 118 aaPredicted RBP9.26□□□□□ -0.93
CDH3-203ENST00000542274 IL15RAQ13261 267 aa9.26□□□□□ -0.93
CDH3-203ENST00000542274 RPEL1Q2QD12 228 aa9.26□□□□□ -0.93
CDH3-203ENST00000542274 FAM19A5Q7Z5A7 132 aaPredicted RBP9.26□□□□□ -0.93
CDH3-203ENST00000542274 SIGLEC9Q9Y336 463 aa9.26□□□□□ -0.93
CDH3-203ENST00000542274 LINC00312Q9Y6C7 94 aa9.26□□□□□ -0.93
CDH3-203ENST00000542274 DNAJC13O75165 2243 aa9.26□□□□□ -0.93
CDH3-203ENST00000542274 ZNF407Q9C0G0 2248 aa9.26□□□□□ -0.93
CDH3-203ENST00000542274 A0A087X0K7 114 aa9.26□□□□□ -0.93
CDH3-203ENST00000542274 A0A1W2PRX2 142 aa9.26□□□□□ -0.93
CDH3-203ENST00000542274 H0YJW9 148 aa9.26□□□□□ -0.93
CDH3-203ENST00000542274 CA7P43166 264 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 797.1 ms