RNA–Protein interactions for RNA: ENST00000541713.5

PTPN1-202, Transcript of protein tyrosine phosphatase, non-receptor type 1, humanhuman

TSL 2 BASIC

Gene PTPN1, Length 3,469 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1-202ENST00000541713 DYSFO75923 2080 aa11.15□□□□□ -0.63
PTPN1-202ENST00000541713 ADH4P08319 380 aa11.14□□□□□ -0.63
PTPN1-202ENST00000541713 IRF2P14316 349 aa11.14□□□□□ -0.63
PTPN1-202ENST00000541713 SUMO1P63165 101 aaKnown RBP11.14□□□□□ -0.63
PTPN1-202ENST00000541713 RELBQ01201 579 aa11.14□□□□□ -0.63
PTPN1-202ENST00000541713 SLC24A4Q8NFF2 622 aa11.14□□□□□ -0.63
PTPN1-202ENST00000541713 LURAP1Q96LR2 239 aa11.14□□□□□ -0.63
PTPN1-202ENST00000541713 GGTLC1Q9BX51 225 aa11.14□□□□□ -0.63
PTPN1-202ENST00000541713 OR51B2Q9Y5P1 312 aa11.14□□□□□ -0.63
PTPN1-202ENST00000541713 B4DEV8 164 aa11.14□□□□□ -0.63
PTPN1-202ENST00000541713 HRASP01112 189 aa11.14□□□□□ -0.63
PTPN1-202ENST00000541713 OR10J1P30954 320 aa11.14□□□□□ -0.63
PTPN1-202ENST00000541713 IER3P46695 156 aa11.14□□□□□ -0.63
PTPN1-202ENST00000541713 ERVFC1-1P60608 527 aa11.14□□□□□ -0.63
PTPN1-202ENST00000541713 LINC01551Q86U37 167 aa11.14□□□□□ -0.63
PTPN1-202ENST00000541713 ATG101Q9BSB4 218 aa11.14□□□□□ -0.63
PTPN1-202ENST00000541713 SSBP3Q9BWW4 388 aaPredicted RBP11.14□□□□□ -0.63
PTPN1-202ENST00000541713 PLSCR4Q9NRQ2 329 aa11.14□□□□□ -0.63
PTPN1-202ENST00000541713 SLC35D1Q9NTN3 355 aa11.14□□□□□ -0.63
PTPN1-202ENST00000541713 WDR83OSQ9Y284 106 aa11.14□□□□□ -0.63
PTPN1-202ENST00000541713 FAM215AQ9Y5M1 114 aa11.14□□□□□ -0.63
PTPN1-202ENST00000541713 KMT2EQ8IZD2 1858 aa11.14□□□□□ -0.63
PTPN1-202ENST00000541713 FAM90A26D6RGX4 464 aa11.14□□□□□ -0.63
PTPN1-202ENST00000541713 MBP02144 154 aa11.14□□□□□ -0.63
PTPN1-202ENST00000541713 TIMP3P35625 211 aa11.14□□□□□ -0.63
PTPN1-202ENST00000541713 PRR30Q53SZ7 412 aaPredicted RBP11.14□□□□□ -0.63
PTPN1-202ENST00000541713 HCP5Q6MZN7 132 aa11.14□□□□□ -0.63
PTPN1-202ENST00000541713 RNASE7Q9H1E1 156 aaKnown RBP11.14□□□□□ -0.63
PTPN1-202ENST00000541713 PRDM13Q9H4Q3 707 aa11.14□□□□□ -0.63
PTPN1-202ENST00000541713 TRAV34A0A0B4J273 112 aa11.13□□□□□ -0.63
PTPN1-202ENST00000541713 TM4SF5O14894 197 aa11.13□□□□□ -0.63
PTPN1-202ENST00000541713 NUBP1P53384 320 aa11.13□□□□□ -0.63
PTPN1-202ENST00000541713 LOXL3P58215 753 aa11.13□□□□□ -0.63
PTPN1-202ENST00000541713 SPCS3P61009 180 aa11.13□□□□□ -0.63
PTPN1-202ENST00000541713 ATP6V1FQ16864 119 aa11.13□□□□□ -0.63
PTPN1-202ENST00000541713 MRPL54Q6P161 138 aaKnown RBP11.13□□□□□ -0.63
PTPN1-202ENST00000541713 KDF1Q8NAX2 398 aaPredicted RBP11.13□□□□□ -0.63
PTPN1-202ENST00000541713 ZBTB34Q8NCN2 500 aa11.13□□□□□ -0.63
PTPN1-202ENST00000541713 P2RX4Q99571 388 aa11.13□□□□□ -0.63
PTPN1-202ENST00000541713 IGHG3P01860 377 aa11.13□□□□□ -0.63
PTPN1-202ENST00000541713 OR4A8P0C604 315 aa11.13□□□□□ -0.63
PTPN1-202ENST00000541713 GPX4P36969 197 aaPredicted RBP11.13□□□□□ -0.63
PTPN1-202ENST00000541713 S100A12P80511 92 aa11.13□□□□□ -0.63
PTPN1-202ENST00000541713 STUMQ69YW2 141 aa11.13□□□□□ -0.63
PTPN1-202ENST00000541713 ASCL2Q99929 193 aa11.13□□□□□ -0.63
PTPN1-202ENST00000541713 F2Z2F3 143 aa11.12□□□□□ -0.63
PTPN1-202ENST00000541713 IGHV1-46P01743 117 aa11.12□□□□□ -0.63
PTPN1-202ENST00000541713 SP5Q6BEB4 398 aaPredicted RBP11.12□□□□□ -0.63
PTPN1-202ENST00000541713 OR4S2Q8NH73 311 aa11.12□□□□□ -0.63
PTPN1-202ENST00000541713 RNF7Q9UBF6 113 aa11.12□□□□□ -0.63
PTPN1-202ENST00000541713 SSBP2P81877 361 aaPredicted RBP11.12□□□□□ -0.63
PTPN1-202ENST00000541713 EFNB3Q15768 340 aa11.12□□□□□ -0.63
PTPN1-202ENST00000541713 C17orf58Q2M2W7 97 aa11.12□□□□□ -0.63
PTPN1-202ENST00000541713 BLNKQ8WV28 456 aa11.12□□□□□ -0.63
PTPN1-202ENST00000541713 SRD5A3Q9H8P0 318 aa11.12□□□□□ -0.63
PTPN1-202ENST00000541713 PITPNC1Q9UKF7 332 aa11.12□□□□□ -0.63
PTPN1-202ENST00000541713 CENPEQ02224 2701 aa11.12□□□□□ -0.63
PTPN1-202ENST00000541713 E7EUB6 86 aa11.12□□□□□ -0.63
PTPN1-202ENST00000541713 LY6HO94772 140 aa11.12□□□□□ -0.63
PTPN1-202ENST00000541713 OR5G3P0C626 314 aa11.12□□□□□ -0.63
PTPN1-202ENST00000541713 KCNIP4Q6PIL6 250 aa11.12□□□□□ -0.63
PTPN1-202ENST00000541713 TEPPQ6URK8 271 aa11.12□□□□□ -0.63
PTPN1-202ENST00000541713 PQLC2Q6ZP29 291 aa11.12□□□□□ -0.63
PTPN1-202ENST00000541713 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.11□□□□□ -0.636e-7■■■■■ 41.2
PTPN1-202ENST00000541713 P0C879 139 aa11.11□□□□□ -0.63
PTPN1-202ENST00000541713 LYPD2Q6UXB3 125 aa11.11□□□□□ -0.63
PTPN1-202ENST00000541713 OR8I2Q8N0Y5 310 aa11.11□□□□□ -0.63
PTPN1-202ENST00000541713 MRPL20Q9BYC9 149 aaKnown RBP11.11□□□□□ -0.63
PTPN1-202ENST00000541713 GSX1Q9H4S2 264 aaPredicted RBP11.11□□□□□ -0.63
PTPN1-202ENST00000541713 MANBALQ9NQG1 85 aa11.11□□□□□ -0.63
PTPN1-202ENST00000541713 TSTD3H0UI37 97 aa11.11□□□□□ -0.63
PTPN1-202ENST00000541713 OR10X1Q8NGY0 326 aa11.11□□□□□ -0.63
PTPN1-202ENST00000541713 HARBI1Q96MB7 349 aa11.11□□□□□ -0.63
PTPN1-202ENST00000541713 NPVFQ9HCQ7 196 aa11.11□□□□□ -0.63
PTPN1-202ENST00000541713 DMRT1Q9Y5R6 373 aa11.11□□□□□ -0.63
PTPN1-202ENST00000541713 S4R3C0 116 aa11.11□□□□□ -0.63
PTPN1-202ENST00000541713 RND2P52198 227 aa11.11□□□□□ -0.63
PTPN1-202ENST00000541713 SSX2Q16385 188 aa11.11□□□□□ -0.63
PTPN1-202ENST00000541713 MORN5Q5VZ52 161 aa11.11□□□□□ -0.63
PTPN1-202ENST00000541713 TRBV24-1A0A075B6N3 115 aa11.1□□□□□ -0.63
PTPN1-202ENST00000541713 PIGBOS1A0A0B4J2F0 54 aa11.1□□□□□ -0.63
PTPN1-202ENST00000541713 TMEM250H0YL14 139 aa11.1□□□□□ -0.63
PTPN1-202ENST00000541713 PYYP10082 97 aa11.1□□□□□ -0.63
PTPN1-202ENST00000541713 HIST1H1BP16401 226 aaKnown RBP11.1□□□□□ -0.63
PTPN1-202ENST00000541713 GCHFRP30047 84 aa11.1□□□□□ -0.63
PTPN1-202ENST00000541713 EIF4EBP1Q13541 118 aaPredicted RBP11.1□□□□□ -0.63
PTPN1-202ENST00000541713 LEMD1Q68G75 181 aa11.1□□□□□ -0.63
PTPN1-202ENST00000541713 ZCCHC14Q8WYQ9 949 aaKnown RBP11.1□□□□□ -0.63
PTPN1-202ENST00000541713 SFRP2Q96HF1 295 aa11.1□□□□□ -0.63
PTPN1-202ENST00000541713 KBTBD11-OT1A0A1B0GTJ5 212 aa11.1□□□□□ -0.63
PTPN1-202ENST00000541713 GZMBP10144 247 aa11.1□□□□□ -0.63
PTPN1-202ENST00000541713 ORM2P19652 201 aa11.1□□□□□ -0.63
PTPN1-202ENST00000541713 CD24P25063 80 aa11.1□□□□□ -0.63
PTPN1-202ENST00000541713 BAGE3Q86Y29 109 aa11.1□□□□□ -0.63
PTPN1-202ENST00000541713 BAGE2Q86Y30 109 aa11.1□□□□□ -0.63
PTPN1-202ENST00000541713 OR10G8Q8NGN5 311 aa11.1□□□□□ -0.63
PTPN1-202ENST00000541713 COMMD5Q9GZQ3 224 aa11.1□□□□□ -0.63
PTPN1-202ENST00000541713 IDI2-AS1Q9NZ38 188 aa11.1□□□□□ -0.63
PTPN1-202ENST00000541713 FCN1O00602 326 aa11.1□□□□□ -0.63
PTPN1-202ENST00000541713 DDTP30046 118 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms