RNA–Protein interactions for RNA: ENST00000541687.5

GCFC2-211, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

TSL 2 BASIC

Gene GCFC2, Length 4,318 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-211ENST00000541687 HEPN1Q6WQI6 88 aa12.13□□□□□ -0.47
GCFC2-211ENST00000541687 STPG3Q8N7X2 389 aa12.13□□□□□ -0.47
GCFC2-211ENST00000541687 CBLN4Q9NTU7 201 aa12.13□□□□□ -0.47
GCFC2-211ENST00000541687 JPT1Q9UK76 154 aa12.13□□□□□ -0.47
GCFC2-211ENST00000541687 PPIAL4AQ9Y536 164 aa12.13□□□□□ -0.47
GCFC2-211ENST00000541687 A0A0C4DFX4 3053 aa12.13□□□□□ -0.47
GCFC2-211ENST00000541687 CA2P00918 260 aa12.13□□□□□ -0.47
GCFC2-211ENST00000541687 LINC00869P0C866 280 aa12.13□□□□□ -0.47
GCFC2-211ENST00000541687 C1orf185Q5T7R7 199 aa12.13□□□□□ -0.47
GCFC2-211ENST00000541687 CYP2G1PQ6ZSU1 146 aa12.13□□□□□ -0.47
GCFC2-211ENST00000541687 C5orf52A6NGY3 159 aa12.13□□□□□ -0.47
GCFC2-211ENST00000541687 TMEM250H0YL14 139 aa12.13□□□□□ -0.47
GCFC2-211ENST00000541687 SOD3P08294 240 aa12.13□□□□□ -0.47
GCFC2-211ENST00000541687 CBLN1P23435 193 aa12.13□□□□□ -0.47
GCFC2-211ENST00000541687 RPP25LQ8N5L8 163 aaKnown RBP12.13□□□□□ -0.47
GCFC2-211ENST00000541687 LOXL4Q96JB6 756 aa12.13□□□□□ -0.47
GCFC2-211ENST00000541687 IL19Q9UHD0 177 aa12.13□□□□□ -0.47
GCFC2-211ENST00000541687 SLC25A17O43808 307 aa12.13□□□□□ -0.47
GCFC2-211ENST00000541687 MPDU1O75352 247 aa12.13□□□□□ -0.47
GCFC2-211ENST00000541687 ORM1P02763 201 aa12.13□□□□□ -0.47
GCFC2-211ENST00000541687 OR4A8P0C604 315 aa12.13□□□□□ -0.47
GCFC2-211ENST00000541687 ZNF883P0CG24 379 aa12.13□□□□□ -0.47
GCFC2-211ENST00000541687 HOXA5P20719 270 aa12.13□□□□□ -0.47
GCFC2-211ENST00000541687 RPL23P62829 140 aaKnown RBP12.13□□□□□ -0.47
GCFC2-211ENST00000541687 PCSK4Q6UW60 755 aa12.13□□□□□ -0.47
GCFC2-211ENST00000541687 ASCL4Q6XD76 172 aa12.13□□□□□ -0.47
GCFC2-211ENST00000541687 SCGB1D4Q6XE38 83 aa12.13□□□□□ -0.47
GCFC2-211ENST00000541687 TMEM116Q8NCL8 245 aa12.13□□□□□ -0.47
GCFC2-211ENST00000541687 VSTM2AQ8TAG5 236 aa12.13□□□□□ -0.47
GCFC2-211ENST00000541687 DPF1Q92782 380 aa12.13□□□□□ -0.47
GCFC2-211ENST00000541687 ACACBO00763 2458 aa12.12□□□□□ -0.47
GCFC2-211ENST00000541687 A0A1B0GV90 55 aa12.12□□□□□ -0.47
GCFC2-211ENST00000541687 M0QZK8 103 aa12.12□□□□□ -0.47
GCFC2-211ENST00000541687 GGCTO75223 188 aaKnown RBP12.12□□□□□ -0.47
GCFC2-211ENST00000541687 CD82P27701 267 aa12.12□□□□□ -0.47
GCFC2-211ENST00000541687 COL5A1-AS1Q5SY13 56 aa12.12□□□□□ -0.47
GCFC2-211ENST00000541687 C10orf113Q5VZT2 155 aa12.12□□□□□ -0.47
GCFC2-211ENST00000541687 SSX8Q7RTT4 187 aa12.12□□□□□ -0.47
GCFC2-211ENST00000541687 DOLPP1Q86YN1 238 aa12.12□□□□□ -0.47
GCFC2-211ENST00000541687 FAM222BQ8WU58 562 aa12.12□□□□□ -0.47
GCFC2-211ENST00000541687 IMMP2LQ96T52 175 aa12.12□□□□□ -0.47
GCFC2-211ENST00000541687 INSIG2Q9Y5U4 225 aa12.12□□□□□ -0.47
GCFC2-211ENST00000541687 XIRP2A4UGR9 3374 aa12.12□□□□□ -0.47
GCFC2-211ENST00000541687 CD99P14209 185 aa12.12□□□□□ -0.47
GCFC2-211ENST00000541687 COMPP49747 757 aaPredicted RBP12.12□□□□□ -0.47
GCFC2-211ENST00000541687 SCO2A0A1W2PP80 73 aa12.12□□□□□ -0.47
GCFC2-211ENST00000541687 BRS3P32247 399 aa12.12□□□□□ -0.47
GCFC2-211ENST00000541687 ZNF714Q96N38 554 aa12.12□□□□□ -0.47
GCFC2-211ENST00000541687 IFITM10A6NMD0 228 aa12.11□□□□□ -0.47
GCFC2-211ENST00000541687 CORTO00230 105 aa12.11□□□□□ -0.47
GCFC2-211ENST00000541687 IGFBP2P18065 325 aa12.11□□□□□ -0.47
GCFC2-211ENST00000541687 ST6GALNAC3Q8NDV1 305 aa12.11□□□□□ -0.47
GCFC2-211ENST00000541687 GTF3AQ92664 365 aaKnown RBP12.11□□□□□ -0.47
GCFC2-211ENST00000541687 MED13Q9UHV7 2174 aa12.11□□□□□ -0.47
GCFC2-211ENST00000541687 CGAP01215 116 aa12.11□□□□□ -0.47
GCFC2-211ENST00000541687 APCSP02743 223 aa12.11□□□□□ -0.47
GCFC2-211ENST00000541687 HOXB1P14653 301 aaPredicted RBP12.11□□□□□ -0.47
GCFC2-211ENST00000541687 GUCD1Q96NT3 240 aa12.11□□□□□ -0.47
GCFC2-211ENST00000541687 MAP1LC3CQ9BXW4 147 aa12.11□□□□□ -0.47
GCFC2-211ENST00000541687 GTF3C1Q12789 2109 aa12.11□□□□□ -0.47
GCFC2-211ENST00000541687 J3QW42 95 aa12.11□□□□□ -0.47
GCFC2-211ENST00000541687 OR9G9P0C7N8 305 aa12.11□□□□□ -0.47
GCFC2-211ENST00000541687 C1QTNF9P0C862 333 aa12.11□□□□□ -0.47
GCFC2-211ENST00000541687 ACSF3Q4G176 576 aaPredicted RBP12.11□□□□□ -0.47
GCFC2-211ENST00000541687 ATOH7Q8N100 152 aa12.11□□□□□ -0.47
GCFC2-211ENST00000541687 NABP2Q9BQ15 211 aa12.11□□□□□ -0.47
GCFC2-211ENST00000541687 SSBP3Q9BWW4 388 aaPredicted RBP12.11□□□□□ -0.47
GCFC2-211ENST00000541687 LOC389332A0A1B0GUA5 103 aa12.1□□□□□ -0.47
GCFC2-211ENST00000541687 SIAH2O43255 324 aa12.1□□□□□ -0.47
GCFC2-211ENST00000541687 IL6RP08887 468 aaPredicted RBP12.1□□□□□ -0.47
GCFC2-211ENST00000541687 RPL8P62917 257 aaKnown RBP12.1□□□□□ -0.47
GCFC2-211ENST00000541687 ASCL3Q9NQ33 180 aa12.1□□□□□ -0.47
GCFC2-211ENST00000541687 UBE2CO00762 179 aa12.1□□□□□ -0.47
GCFC2-211ENST00000541687 SPSB3Q6PJ21 355 aa12.1□□□□□ -0.47
GCFC2-211ENST00000541687 IDI2-AS1Q9NZ38 188 aa12.1□□□□□ -0.47
GCFC2-211ENST00000541687 IFNL4K9M1U5 179 aa12.1□□□□□ -0.47
GCFC2-211ENST00000541687 GCHFRP30047 84 aa12.1□□□□□ -0.47
GCFC2-211ENST00000541687 UQCRFS1P47985 274 aa12.1□□□□□ -0.47
GCFC2-211ENST00000541687 RND2P52198 227 aa12.1□□□□□ -0.47
GCFC2-211ENST00000541687 OR4A47Q6IF82 309 aa12.1□□□□□ -0.47
GCFC2-211ENST00000541687 SFRP2Q96HF1 295 aa12.1□□□□□ -0.47
GCFC2-211ENST00000541687 CHD9Q3L8U1 2897 aa12.1□□□□□ -0.47
GCFC2-211ENST00000541687 PTPRQQ9UMZ3 2332 aa12.1□□□□□ -0.47
GCFC2-211ENST00000541687 GNG7O60262 68 aa12.1□□□□□ -0.47
GCFC2-211ENST00000541687 GOSR1O95249 250 aa12.1□□□□□ -0.47
GCFC2-211ENST00000541687 HTN1P15515 57 aa12.1□□□□□ -0.47
GCFC2-211ENST00000541687 IL15RAQ13261 267 aa12.1□□□□□ -0.47
GCFC2-211ENST00000541687 PEAR1Q5VY43 1037 aaPredicted RBP12.1□□□□□ -0.47
GCFC2-211ENST00000541687 GCSAMQ8N6F7 178 aa12.1□□□□□ -0.47
GCFC2-211ENST00000541687 PAXXQ9BUH6 204 aa12.1□□□□□ -0.47
GCFC2-211ENST00000541687 GP6Q9HCN6 339 aa12.1□□□□□ -0.47
GCFC2-211ENST00000541687 REV3LO60673 3130 aa12.09□□□□□ -0.47
GCFC2-211ENST00000541687 A0A087WWC5 75 aa12.09□□□□□ -0.47
GCFC2-211ENST00000541687 IGLV3-1P01715 115 aa12.09□□□□□ -0.47
GCFC2-211ENST00000541687 SRP14P37108 136 aaKnown RBP12.09□□□□□ -0.47
GCFC2-211ENST00000541687 Q6P435 159 aa12.09□□□□□ -0.47
GCFC2-211ENST00000541687 COLCA1Q6ZS62 124 aa12.09□□□□□ -0.47
GCFC2-211ENST00000541687 COA4Q9NYJ1 87 aa12.09□□□□□ -0.47
GCFC2-211ENST00000541687 DMRT1Q9Y5R6 373 aa12.09□□□□□ -0.47
GCFC2-211ENST00000541687 CD3EP07766 207 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms