RNA–Protein interactions for RNA: ENST00000541615.5

SNHG1-218, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5 BASIC

Gene SNHG1, Length 748 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-218ENST00000541615 EBLN2Q6P2I7 272 aa4.32□□□□□ -1.72
SNHG1-218ENST00000541615 KCTD18Q6PI47 426 aaPredicted RBP4.32□□□□□ -1.72
SNHG1-218ENST00000541615 ASCL5Q7RTU5 278 aa4.32□□□□□ -1.72
SNHG1-218ENST00000541615 ATP5L2Q7Z4Y8 100 aa4.32□□□□□ -1.72
SNHG1-218ENST00000541615 PPP1R32Q7Z5V6 425 aa4.32□□□□□ -1.72
SNHG1-218ENST00000541615 MMD2Q8IY49 270 aa4.32□□□□□ -1.72
SNHG1-218ENST00000541615 TMEM86AQ8N2M4 240 aa4.32□□□□□ -1.72
SNHG1-218ENST00000541615 C3orf22Q8N5N4 141 aa4.32□□□□□ -1.72
SNHG1-218ENST00000541615 RFLNBQ8N5W9 214 aa4.32□□□□□ -1.72
SNHG1-218ENST00000541615 ZNF721Q8TF20 911 aa4.32□□□□□ -1.72
SNHG1-218ENST00000541615 DLX4Q92988 240 aaPredicted RBP4.32□□□□□ -1.72
SNHG1-218ENST00000541615 LINC00526Q96FQ7 95 aa4.32□□□□□ -1.72
SNHG1-218ENST00000541615 SLC25A44Q96H78 314 aaPredicted RBP4.32□□□□□ -1.72
SNHG1-218ENST00000541615 C4orf45Q96LM5 186 aa4.32□□□□□ -1.72
SNHG1-218ENST00000541615 LINC00479Q96M42 142 aa4.32□□□□□ -1.72
SNHG1-218ENST00000541615 AMELYQ99218 206 aa4.32□□□□□ -1.72
SNHG1-218ENST00000541615 LINC01587Q99440 93 aa4.32□□□□□ -1.72
SNHG1-218ENST00000541615 KIR2DL4Q99706 377 aa4.32□□□□□ -1.72
SNHG1-218ENST00000541615 OSTCQ9NRP0 149 aa4.32□□□□□ -1.72
SNHG1-218ENST00000541615 WSB2Q9NYS7 404 aaPredicted RBP4.32□□□□□ -1.72
SNHG1-218ENST00000541615 HLA-DRB4X5D2U9 266 aa4.32□□□□□ -1.72
SNHG1-218ENST00000541615 SHROOM3Q8TF72 1996 aa4.32□□□□□ -1.72
SNHG1-218ENST00000541615 PIKFYVEQ9Y2I7 2098 aa4.31□□□□□ -1.72
SNHG1-218ENST00000541615 A0A0B4J2E0 115 aa4.31□□□□□ -1.72
SNHG1-218ENST00000541615 C3orf85A0A1B0GTC6 90 aa4.31□□□□□ -1.72
SNHG1-218ENST00000541615 A0A1B0GX12 115 aa4.31□□□□□ -1.72
SNHG1-218ENST00000541615 MBD3L4A6NDZ8 208 aaPredicted RBP4.31□□□□□ -1.72
SNHG1-218ENST00000541615 MBD3L3A6NE82 208 aaPredicted RBP4.31□□□□□ -1.72
SNHG1-218ENST00000541615 FAM24AA6NFZ4 105 aa4.31□□□□□ -1.72
SNHG1-218ENST00000541615 MANSC4A6NHS7 340 aaPredicted RBP4.31□□□□□ -1.72
SNHG1-218ENST00000541615 MBD3L5A6NJ08 208 aaPredicted RBP4.31□□□□□ -1.72
SNHG1-218ENST00000541615 TGFBR3LH3BV60 316 aa4.31□□□□□ -1.72
SNHG1-218ENST00000541615 ZNF561-AS1K7EIQ3 104 aa4.31□□□□□ -1.72
SNHG1-218ENST00000541615 BMPR1BO00238 502 aa4.31□□□□□ -1.72
SNHG1-218ENST00000541615 RRHO14718 337 aa4.31□□□□□ -1.72
SNHG1-218ENST00000541615 TNFSF12O43508 249 aa4.31□□□□□ -1.72
SNHG1-218ENST00000541615 IGHG1P01857 330 aa4.31□□□□□ -1.72
SNHG1-218ENST00000541615 SCGB1C2P0DMR2 95 aa4.31□□□□□ -1.72
SNHG1-218ENST00000541615 IL9P15248 144 aa4.31□□□□□ -1.72
SNHG1-218ENST00000541615 ACRV1P26436 265 aa4.31□□□□□ -1.72
SNHG1-218ENST00000541615 ZNF136P52737 540 aa4.31□□□□□ -1.72
SNHG1-218ENST00000541615 RBM11P57052 281 aaKnown RBP4.31□□□□□ -1.72
SNHG1-218ENST00000541615 ID3Q02535 119 aa4.31□□□□□ -1.72
SNHG1-218ENST00000541615 KLRB1Q12918 225 aa4.31□□□□□ -1.72
SNHG1-218ENST00000541615 UNC119Q13432 240 aa4.31□□□□□ -1.72
SNHG1-218ENST00000541615 ARFRP1Q13795 201 aa4.31□□□□□ -1.72
SNHG1-218ENST00000541615 DIAPH2-AS1Q14236 149 aa4.31□□□□□ -1.72
SNHG1-218ENST00000541615 PRSS53Q2L4Q9 553 aa4.31□□□□□ -1.72
SNHG1-218ENST00000541615 CXorf66Q5JRM2 361 aaPredicted RBP4.31□□□□□ -1.72
SNHG1-218ENST00000541615 KLF17Q5JT82 389 aaPredicted RBP4.31□□□□□ -1.72
SNHG1-218ENST00000541615 C9orf153Q5TBE3 101 aa4.31□□□□□ -1.72
SNHG1-218ENST00000541615 TXNDC8Q6A555 127 aa4.31□□□□□ -1.72
SNHG1-218ENST00000541615 Q6P435 159 aa4.31□□□□□ -1.72
SNHG1-218ENST00000541615 ZNF841Q6ZN19 808 aa4.31□□□□□ -1.72
SNHG1-218ENST00000541615 TCF23Q7RTU1 214 aa4.31□□□□□ -1.72
SNHG1-218ENST00000541615 DEFB132Q7Z7B7 95 aa4.31□□□□□ -1.72
SNHG1-218ENST00000541615 DTX2Q86UW9 622 aa4.31□□□□□ -1.72
SNHG1-218ENST00000541615 GAPTQ8N292 157 aa4.31□□□□□ -1.72
SNHG1-218ENST00000541615 OTOSQ8NHW6 89 aa4.31□□□□□ -1.72
SNHG1-218ENST00000541615 CLEC4CQ8WTT0 213 aa4.31□□□□□ -1.72
SNHG1-218ENST00000541615 NMNAT3Q96T66 252 aa4.31□□□□□ -1.72
SNHG1-218ENST00000541615 APOOQ9BUR5 198 aa4.31□□□□□ -1.72
SNHG1-218ENST00000541615 SLC25A2Q9BXI2 301 aa4.31□□□□□ -1.72
SNHG1-218ENST00000541615 FBXL15Q9H469 300 aa4.31□□□□□ -1.72
SNHG1-218ENST00000541615 PELI2Q9HAT8 420 aa4.31□□□□□ -1.72
SNHG1-218ENST00000541615 CLDND1Q9NY35 253 aa4.31□□□□□ -1.72
SNHG1-218ENST00000541615 PRO0461Q9UI25 63 aa4.31□□□□□ -1.72
SNHG1-218ENST00000541615 FOXA2Q9Y261 457 aaPredicted RBP4.31□□□□□ -1.72
SNHG1-218ENST00000541615 RNF114Q9Y508 228 aa4.31□□□□□ -1.72
SNHG1-218ENST00000541615 RALGAPA2Q2PPJ7 1873 aa4.3□□□□□ -1.72
SNHG1-218ENST00000541615 COL11A1P12107 1806 aaPredicted RBP4.3□□□□□ -1.72
SNHG1-218ENST00000541615 SIP14410 1827 aa4.3□□□□□ -1.72
SNHG1-218ENST00000541615 BRWD3Q6RI45 1802 aa4.3□□□□□ -1.72
SNHG1-218ENST00000541615 A0A1W2PR77 199 aa4.3□□□□□ -1.72
SNHG1-218ENST00000541615 MED19A0JLT2 244 aaPredicted RBP4.3□□□□□ -1.72
SNHG1-218ENST00000541615 IZUMO1RA6ND01 250 aa4.3□□□□□ -1.72
SNHG1-218ENST00000541615 FAM90A18PA6NE21 464 aa4.3□□□□□ -1.72
SNHG1-218ENST00000541615 FAM90A16PA6NEW6 464 aa4.3□□□□□ -1.72
SNHG1-218ENST00000541615 FAM90A8PA6NJQ4 464 aa4.3□□□□□ -1.72
SNHG1-218ENST00000541615 FAM90A9PA6NNJ1 464 aa4.3□□□□□ -1.72
SNHG1-218ENST00000541615 TMEM14DPA8MWL7 114 aa4.3□□□□□ -1.72
SNHG1-218ENST00000541615 A8MWV9 139 aa4.3□□□□□ -1.72
SNHG1-218ENST00000541615 IGLL5B9A064 214 aa4.3□□□□□ -1.72
SNHG1-218ENST00000541615 CCL22O00626 93 aa4.3□□□□□ -1.72
SNHG1-218ENST00000541615 SPRY1O43609 319 aaPredicted RBP4.3□□□□□ -1.72
SNHG1-218ENST00000541615 CHST1O43916 411 aa4.3□□□□□ -1.72
SNHG1-218ENST00000541615 DPM2O94777 84 aa4.3□□□□□ -1.72
SNHG1-218ENST00000541615 NDUFC2O95298 119 aa4.3□□□□□ -1.72
SNHG1-218ENST00000541615 LGALS2P05162 132 aa4.3□□□□□ -1.72
SNHG1-218ENST00000541615 IGLC6P0CF74 106 aa4.3□□□□□ -1.72
SNHG1-218ENST00000541615 CSN1S1P47710 185 aa4.3□□□□□ -1.72
SNHG1-218ENST00000541615 HERV-K104P61576 105 aa4.3□□□□□ -1.72
SNHG1-218ENST00000541615 RPS15AP62244 130 aaKnown RBP4.3□□□□□ -1.72
SNHG1-218ENST00000541615 HERVK_113P63121 156 aa4.3□□□□□ -1.72
SNHG1-218ENST00000541615 RRN3P1Q2M238 152 aa4.3□□□□□ -1.72
SNHG1-218ENST00000541615 TMEM196Q5HYL7 178 aa4.3□□□□□ -1.72
SNHG1-218ENST00000541615 FAM78AQ5JUQ0 283 aa4.3□□□□□ -1.72
SNHG1-218ENST00000541615 C1orf140Q5VVS0 124 aa4.3□□□□□ -1.72
SNHG1-218ENST00000541615 CDC42EP5Q6NZY7 148 aa4.3□□□□□ -1.72
SNHG1-218ENST00000541615 SH2D6Q7Z4S9 175 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms