RNA–Protein interactions for RNA: ENST00000540230.5

UBE3B-212, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,541 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-212ENST00000540230 KLK9Q9UKQ9 250 aa11.51□□□□□ -0.57
UBE3B-212ENST00000540230 ZNF256Q9Y2P7 627 aaPredicted RBP11.51□□□□□ -0.57
UBE3B-212ENST00000540230 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.5□□□□□ -0.57
UBE3B-212ENST00000540230 ANKRD20A5PA0PJZ0 165 aa11.5□□□□□ -0.57
UBE3B-212ENST00000540230 FABP12A6NFH5 140 aa11.5□□□□□ -0.57
UBE3B-212ENST00000540230 MFSD2BA6NFX1 497 aa11.5□□□□□ -0.57
UBE3B-212ENST00000540230 HLA-AP01891 365 aaKnown RBP11.5□□□□□ -0.57
UBE3B-212ENST00000540230 SPNP16150 400 aa11.5□□□□□ -0.57
UBE3B-212ENST00000540230 RPEL1Q2QD12 228 aa11.5□□□□□ -0.57
UBE3B-212ENST00000540230 IL34Q6ZMJ4 242 aa11.5□□□□□ -0.57
UBE3B-212ENST00000540230 CADM3Q8N126 398 aa11.5□□□□□ -0.57
UBE3B-212ENST00000540230 OR1L8Q8NGR8 309 aa11.5□□□□□ -0.57
UBE3B-212ENST00000540230 HINT2Q9BX68 163 aa11.5□□□□□ -0.57
UBE3B-212ENST00000540230 NDUFA4L2Q9NRX3 87 aa11.5□□□□□ -0.57
UBE3B-212ENST00000540230 OR51B2Q9Y5P1 312 aa11.5□□□□□ -0.57
UBE3B-212ENST00000540230 V9GYH0 126 aa11.5□□□□□ -0.57
UBE3B-212ENST00000540230 C15orf61A6NNL5 157 aa11.5□□□□□ -0.57
UBE3B-212ENST00000540230 H0Y980 276 aa11.5□□□□□ -0.57
UBE3B-212ENST00000540230 AKAIN1P0CW23 69 aa11.5□□□□□ -0.57
UBE3B-212ENST00000540230 TRAPPC2P0DI81 140 aa11.5□□□□□ -0.57
UBE3B-212ENST00000540230 TRAPPC2BP0DI82 140 aa11.5□□□□□ -0.57
UBE3B-212ENST00000540230 DEFA4P12838 97 aa11.5□□□□□ -0.57
UBE3B-212ENST00000540230 MEF2DQ14814 521 aa11.5□□□□□ -0.57
UBE3B-212ENST00000540230 SP6Q3SY56 376 aa11.5□□□□□ -0.57
UBE3B-212ENST00000540230 OR9G4Q8NGQ1 327 aa11.5□□□□□ -0.57
UBE3B-212ENST00000540230 OR4C12Q96R67 309 aa11.5□□□□□ -0.57
UBE3B-212ENST00000540230 SRSF8Q9BRL6 282 aaKnown RBP11.5□□□□□ -0.57
UBE3B-212ENST00000540230 RTBDNQ9BSG5 229 aaPredicted RBP11.5□□□□□ -0.57
UBE3B-212ENST00000540230 TMEM14BQ9NUH8 114 aa11.5□□□□□ -0.57
UBE3B-212ENST00000540230 RABL2AQ9UBK7 228 aaPredicted RBP11.5□□□□□ -0.57
UBE3B-212ENST00000540230 ZMAT5Q9UDW3 170 aaKnown RBP11.5□□□□□ -0.57
UBE3B-212ENST00000540230 RABL2BQ9UNT1 228 aa11.5□□□□□ -0.57
UBE3B-212ENST00000540230 LSM4Q9Y4Z0 139 aaKnown RBP11.5□□□□□ -0.57
UBE3B-212ENST00000540230 COL7A1Q02388 2944 aa11.49□□□□□ -0.57
UBE3B-212ENST00000540230 HUWE1Q7Z6Z7 4374 aaKnown RBP11.49□□□□□ -0.57
UBE3B-212ENST00000540230 C3orf85A0A1B0GTC6 90 aa11.49□□□□□ -0.57
UBE3B-212ENST00000540230 SNAPC5O75971 98 aa11.49□□□□□ -0.57
UBE3B-212ENST00000540230 LY86O95711 162 aa11.49□□□□□ -0.57
UBE3B-212ENST00000540230 IGKV1-5P01602 117 aa11.49□□□□□ -0.57
UBE3B-212ENST00000540230 CTSDP07339 412 aaPredicted RBP11.49□□□□□ -0.57
UBE3B-212ENST00000540230 OR13C7P0DN81 318 aa11.49□□□□□ -0.57
UBE3B-212ENST00000540230 MFAP2P55001 183 aa11.49□□□□□ -0.57
UBE3B-212ENST00000540230 ZNF79Q15937 498 aa11.49□□□□□ -0.57
UBE3B-212ENST00000540230 CLEC19AQ6UXS0 136 aa11.49□□□□□ -0.57
UBE3B-212ENST00000540230 OR51S1Q8NGJ8 323 aa11.49□□□□□ -0.57
UBE3B-212ENST00000540230 C5orf66Q9H5L9 145 aa11.49□□□□□ -0.57
UBE3B-212ENST00000540230 COPZ2Q9P299 210 aa11.49□□□□□ -0.57
UBE3B-212ENST00000540230 DISC1C4P0D8 188 aa11.48□□□□□ -0.57
UBE3B-212ENST00000540230 DHFRP00374 187 aa11.48□□□□□ -0.57
UBE3B-212ENST00000540230 IGLV1-51P01701 117 aa11.48□□□□□ -0.57
UBE3B-212ENST00000540230 SERPINE2P07093 398 aa11.48□□□□□ -0.57
UBE3B-212ENST00000540230 EDN2P20800 178 aa11.48□□□□□ -0.57
UBE3B-212ENST00000540230 H2BFWTQ7Z2G1 175 aa11.48□□□□□ -0.57
UBE3B-212ENST00000540230 GDPD1Q8N9F7 314 aa11.48□□□□□ -0.57
UBE3B-212ENST00000540230 ZFAND1Q8TCF1 268 aa11.48□□□□□ -0.57
UBE3B-212ENST00000540230 LSM10Q969L4 123 aaKnown RBP11.48□□□□□ -0.57
UBE3B-212ENST00000540230 TRIM63Q969Q1 353 aa11.48□□□□□ -0.57
UBE3B-212ENST00000540230 PRNDQ9UKY0 176 aa11.48□□□□□ -0.57
UBE3B-212ENST00000540230 A0A0G2JRQ6 117 aa11.47□□□□□ -0.57
UBE3B-212ENST00000540230 ZNF701M0R085 212 aaPredicted RBP11.47□□□□□ -0.57
UBE3B-212ENST00000540230 CSN3P07498 182 aa11.47□□□□□ -0.57
UBE3B-212ENST00000540230 P0C879 139 aa11.47□□□□□ -0.57
UBE3B-212ENST00000540230 HIST1H1BP16401 226 aaKnown RBP11.47□□□□□ -0.57
UBE3B-212ENST00000540230 THOC7Q6I9Y2 204 aaKnown RBP11.47□□□□□ -0.57
UBE3B-212ENST00000540230 ADAMTSL5Q6ZMM2 481 aa11.47□□□□□ -0.57
UBE3B-212ENST00000540230 CCDC71LQ8N9Z2 235 aa11.47□□□□□ -0.57
UBE3B-212ENST00000540230 OR6Q1Q8NGQ2 317 aa11.47□□□□□ -0.57
UBE3B-212ENST00000540230 OR5B3Q8NH48 314 aa11.47□□□□□ -0.57
UBE3B-212ENST00000540230 TSC22D3Q99576 134 aa11.47□□□□□ -0.57
UBE3B-212ENST00000540230 THAP7Q9BT49 309 aaPredicted RBP11.47□□□□□ -0.57
UBE3B-212ENST00000540230 ELOVL1Q9BW60 279 aa11.47□□□□□ -0.57
UBE3B-212ENST00000540230 ZC4H2Q9NQZ6 224 aa11.47□□□□□ -0.57
UBE3B-212ENST00000540230 GPR132Q9UNW8 380 aa11.47□□□□□ -0.57
UBE3B-212ENST00000540230 OR2C1O95371 312 aa11.46□□□□□ -0.57
UBE3B-212ENST00000540230 OR5AC1P0C628 307 aa11.46□□□□□ -0.57
UBE3B-212ENST00000540230 GP9P14770 177 aa11.46□□□□□ -0.57
UBE3B-212ENST00000540230 UCP1P25874 307 aa11.46□□□□□ -0.57
UBE3B-212ENST00000540230 SPINK9Q5DT21 86 aa11.46□□□□□ -0.57
UBE3B-212ENST00000540230 CCDC190Q86UF4 302 aa11.46□□□□□ -0.57
UBE3B-212ENST00000540230 OR4A16Q8NH70 328 aa11.46□□□□□ -0.57
UBE3B-212ENST00000540230 LHFPL5Q8TAF8 219 aa11.46□□□□□ -0.57
UBE3B-212ENST00000540230 EEF1AKMT3Q96AZ1 226 aa11.46□□□□□ -0.57
UBE3B-212ENST00000540230 SLC2A8Q9NY64 477 aa11.46□□□□□ -0.57
UBE3B-212ENST00000540230 F11RQ9Y624 299 aaKnown RBP11.46□□□□□ -0.57
UBE3B-212ENST00000540230 IGHV3-21A0A0B4J1V1 117 aa11.45□□□□□ -0.58
UBE3B-212ENST00000540230 GGCTO75223 188 aaKnown RBP11.45□□□□□ -0.58
UBE3B-212ENST00000540230 ARL3P36405 182 aa11.45□□□□□ -0.58
UBE3B-212ENST00000540230 AKR1C2P52895 323 aa11.45□□□□□ -0.58
UBE3B-212ENST00000540230 KLF9Q13886 244 aaPredicted RBP11.45□□□□□ -0.58
UBE3B-212ENST00000540230 SURF2Q15527 256 aaPredicted RBP11.45□□□□□ -0.58
UBE3B-212ENST00000540230 TRIM16LQ309B1 348 aa11.45□□□□□ -0.58
UBE3B-212ENST00000540230 PYDC2Q56P42 97 aa11.45□□□□□ -0.58
UBE3B-212ENST00000540230 SLC25A24Q6NUK1 477 aa11.45□□□□□ -0.58
UBE3B-212ENST00000540230 HSD17B13Q7Z5P4 300 aaPredicted RBP11.45□□□□□ -0.58
UBE3B-212ENST00000540230 ZNF502Q8TBZ5 544 aa11.45□□□□□ -0.58
UBE3B-212ENST00000540230 TMEM230Q96A57 120 aa11.45□□□□□ -0.58
UBE3B-212ENST00000540230 PRRT1Q99946 306 aa11.45□□□□□ -0.58
UBE3B-212ENST00000540230 FKBP11Q9NYL4 201 aa11.45□□□□□ -0.58
UBE3B-212ENST00000540230 C14orf166Q9Y224 244 aaKnown RBP11.45□□□□□ -0.58
UBE3B-212ENST00000540230 A0A0B4J293 547 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms