RNA–Protein interactions for RNA: ENST00000540109.5

PTPRD-214, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 6,210 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-214ENST00000540109 OOEPA6NGQ2 149 aa5.15□□□□□ -1.59
PTPRD-214ENST00000540109 K7N7A8 449 aa5.15□□□□□ -1.59
PTPRD-214ENST00000540109 DHHO43323 396 aa5.15□□□□□ -1.59
PTPRD-214ENST00000540109 REG1BP48304 166 aa5.15□□□□□ -1.59
PTPRD-214ENST00000540109 ZNF83P51522 516 aa5.15□□□□□ -1.59
PTPRD-214ENST00000540109 TAL2Q16559 108 aa5.15□□□□□ -1.59
PTPRD-214ENST00000540109 LRRC75BQ2VPJ9 315 aa5.15□□□□□ -1.59
PTPRD-214ENST00000540109 ADAMTSL5Q6ZMM2 481 aa5.15□□□□□ -1.59
PTPRD-214ENST00000540109 NUP37Q8NFH4 326 aa5.15□□□□□ -1.59
PTPRD-214ENST00000540109 GATAD1Q8WUU5 269 aa5.15□□□□□ -1.59
PTPRD-214ENST00000540109 SSMEM1Q8WWF3 244 aa5.15□□□□□ -1.59
PTPRD-214ENST00000540109 RTN4RQ9BZR6 473 aa5.15□□□□□ -1.59
PTPRD-214ENST00000540109 NHP2Q9NX24 153 aaKnown RBP5.15□□□□□ -1.59
PTPRD-214ENST00000540109 TRAV5A0A0B4J249 113 aa5.15□□□□□ -1.59
PTPRD-214ENST00000540109 FAM90A9PA6NNJ1 464 aa5.15□□□□□ -1.59
PTPRD-214ENST00000540109 CEACAM18A8MTB9 384 aa5.15□□□□□ -1.59
PTPRD-214ENST00000540109 DLX1P56177 255 aa5.15□□□□□ -1.59
PTPRD-214ENST00000540109 TEPPQ6URK8 271 aa5.15□□□□□ -1.59
PTPRD-214ENST00000540109 ZDHHC23Q8IYP9 409 aa5.15□□□□□ -1.59
PTPRD-214ENST00000540109 SHISA5Q8N114 240 aa5.15□□□□□ -1.59
PTPRD-214ENST00000540109 DEFB123Q8N688 67 aa5.15□□□□□ -1.59
PTPRD-214ENST00000540109 OR8B12Q8NGG6 310 aa5.15□□□□□ -1.59
PTPRD-214ENST00000540109 CLDND2Q8NHS1 167 aa5.15□□□□□ -1.59
PTPRD-214ENST00000540109 MAP1LC3AQ9H492 121 aa5.15□□□□□ -1.59
PTPRD-214ENST00000540109 BEX4Q9NWD9 120 aaPredicted RBP5.15□□□□□ -1.59
PTPRD-214ENST00000540109 C9JQL5 133 aa5.15□□□□□ -1.59
PTPRD-214ENST00000540109 F8W1H4 67 aa5.15□□□□□ -1.59
PTPRD-214ENST00000540109 ZNF324O75467 553 aaPredicted RBP5.15□□□□□ -1.59
PTPRD-214ENST00000540109 CDKN1AP38936 164 aa5.15□□□□□ -1.59
PTPRD-214ENST00000540109 FOXA3P55318 350 aaPredicted RBP5.15□□□□□ -1.59
PTPRD-214ENST00000540109 TMEM50BP56557 158 aa5.15□□□□□ -1.59
PTPRD-214ENST00000540109 CLDN17P56750 224 aa5.15□□□□□ -1.59
PTPRD-214ENST00000540109 RAC3P60763 192 aa5.15□□□□□ -1.59
PTPRD-214ENST00000540109 GNG3P63215 75 aa5.15□□□□□ -1.59
PTPRD-214ENST00000540109 VMA21Q3ZAQ7 101 aa5.15□□□□□ -1.59
PTPRD-214ENST00000540109 C1QL3Q5VWW1 255 aa5.15□□□□□ -1.59
PTPRD-214ENST00000540109 LCN12Q6JVE5 192 aa5.15□□□□□ -1.59
PTPRD-214ENST00000540109 GFI1Q99684 422 aa5.15□□□□□ -1.59
PTPRD-214ENST00000540109 RNF126Q9BV68 326 aa5.15□□□□□ -1.59
PTPRD-214ENST00000540109 C5orf66Q9H5L9 145 aa5.15□□□□□ -1.59
PTPRD-214ENST00000540109 TAAR3PQ9P1P4 343 aa5.15□□□□□ -1.59
PTPRD-214ENST00000540109 LOXL2Q9Y4K0 774 aa5.15□□□□□ -1.59
PTPRD-214ENST00000540109 TRANK1O15050 2925 aa5.14□□□□□ -1.59
PTPRD-214ENST00000540109 MYO9BQ13459 2157 aa5.14□□□□□ -1.59
PTPRD-214ENST00000540109 RBPJQ06330 500 aa5.14□□□□□ -1.59
PTPRD-214ENST00000540109 CXorf66Q5JRM2 361 aaPredicted RBP5.14□□□□□ -1.59
PTPRD-214ENST00000540109 LINC01551Q86U37 167 aa5.14□□□□□ -1.59
PTPRD-214ENST00000540109 PDPNQ86YL7 162 aa5.14□□□□□ -1.59
PTPRD-214ENST00000540109 RAB1CQ92928 201 aa5.14□□□□□ -1.59
PTPRD-214ENST00000540109 TMEM126AQ9H061 195 aa5.14□□□□□ -1.59
PTPRD-214ENST00000540109 PSG11Q9UQ72 335 aa5.14□□□□□ -1.59
PTPRD-214ENST00000540109 TRBV20-1A0A075B6N2 111 aa5.14□□□□□ -1.59
PTPRD-214ENST00000540109 A4D1N5 150 aa5.14□□□□□ -1.59
PTPRD-214ENST00000540109 TMEM8BA6NDV4 472 aa5.14□□□□□ -1.59
PTPRD-214ENST00000540109 TIAF1O95411 115 aa5.14□□□□□ -1.59
PTPRD-214ENST00000540109 CSRP1P21291 193 aaKnown RBP5.14□□□□□ -1.59
PTPRD-214ENST00000540109 ZNF121P58317 390 aaPredicted RBP5.14□□□□□ -1.59
PTPRD-214ENST00000540109 ZNF415Q09FC8 603 aa5.14□□□□□ -1.59
PTPRD-214ENST00000540109 GAGE13Q4V321 117 aa5.14□□□□□ -1.59
PTPRD-214ENST00000540109 SHISA6Q6ZSJ9 500 aa5.14□□□□□ -1.59
PTPRD-214ENST00000540109 Q6ZSR3 168 aa5.14□□□□□ -1.59
PTPRD-214ENST00000540109 FAM89BQ8N5H3 189 aa5.14□□□□□ -1.59
PTPRD-214ENST00000540109 OR10D3Q8NH80 312 aa5.14□□□□□ -1.59
PTPRD-214ENST00000540109 SGK494Q96LW2 274 aa5.14□□□□□ -1.59
PTPRD-214ENST00000540109 OVOL2Q9BRP0 275 aa5.14□□□□□ -1.59
PTPRD-214ENST00000540109 BARX1Q9HBU1 254 aaPredicted RBP5.14□□□□□ -1.59
PTPRD-214ENST00000540109 GPR35Q9HC97 309 aa5.14□□□□□ -1.59
PTPRD-214ENST00000540109 DUSP13Q9UII6 198 aa5.14□□□□□ -1.59
PTPRD-214ENST00000540109 PCDH15Q96QU1 1955 aa5.14□□□□□ -1.59
PTPRD-214ENST00000540109 CPAMD8Q8IZJ3 1885 aa5.14□□□□□ -1.59
PTPRD-214ENST00000540109 IGHV3-64DA0A0J9YX35 117 aa5.14□□□□□ -1.59
PTPRD-214ENST00000540109 A0A1B0GUS0 222 aa5.14□□□□□ -1.59
PTPRD-214ENST00000540109 PRR32B1ATL7 298 aa5.14□□□□□ -1.59
PTPRD-214ENST00000540109 SAP30O75446 220 aa5.14□□□□□ -1.59
PTPRD-214ENST00000540109 HBBP68871 147 aa5.14□□□□□ -1.59
PTPRD-214ENST00000540109 MRPS11P82912 194 aaKnown RBP5.14□□□□□ -1.59
PTPRD-214ENST00000540109 FOXK1P85037 733 aa5.14□□□□□ -1.59
PTPRD-214ENST00000540109 PSG9Q00887 426 aa5.14□□□□□ -1.59
PTPRD-214ENST00000540109 IBA57Q5T440 356 aaKnown RBP5.14□□□□□ -1.59
PTPRD-214ENST00000540109 OR10X1Q8NGY0 326 aa5.14□□□□□ -1.59
PTPRD-214ENST00000540109 LYPD6BQ8NI32 183 aa5.14□□□□□ -1.59
PTPRD-214ENST00000540109 CRIM1Q9NZV1 1036 aa5.14□□□□□ -1.59
PTPRD-214ENST00000540109 LRRC30A6NM36 301 aa5.14□□□□□ -1.59
PTPRD-214ENST00000540109 OR11H12B2RN74 326 aa5.14□□□□□ -1.59
PTPRD-214ENST00000540109 VSIG8P0DPA2 414 aa5.14□□□□□ -1.59
PTPRD-214ENST00000540109 GPR6P46095 362 aaPredicted RBP5.14□□□□□ -1.59
PTPRD-214ENST00000540109 RPL23P62829 140 aaKnown RBP5.14□□□□□ -1.59
PTPRD-214ENST00000540109 WIPI1Q5MNZ9 446 aaPredicted RBP5.14□□□□□ -1.59
PTPRD-214ENST00000540109 OR11H1Q8NG94 326 aa5.14□□□□□ -1.59
PTPRD-214ENST00000540109 OR11H2Q8NH07 326 aa5.14□□□□□ -1.59
PTPRD-214ENST00000540109 SLC25A40Q8TBP6 338 aa5.14□□□□□ -1.59
PTPRD-214ENST00000540109 GNRHR2Q96P88 292 aa5.14□□□□□ -1.59
PTPRD-214ENST00000540109 SPANXB1Q9NS25 103 aaPredicted RBP5.14□□□□□ -1.59
PTPRD-214ENST00000540109 KIR2DL5BA0A0G2JN68 375 aa5.13□□□□□ -1.59
PTPRD-214ENST00000540109 KIR2DL5BA0A0G2JPC4 375 aa5.13□□□□□ -1.59
PTPRD-214ENST00000540109 FAM231BA6NCW3 169 aa5.13□□□□□ -1.59
PTPRD-214ENST00000540109 IZUMO1RA6ND01 250 aa5.13□□□□□ -1.59
PTPRD-214ENST00000540109 GAGE12HA6NDE8 117 aa5.13□□□□□ -1.59
PTPRD-214ENST00000540109 H3BRM9 83 aa5.13□□□□□ -1.59
PTPRD-214ENST00000540109 IL6RP08887 468 aaPredicted RBP5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms