RNA–Protein interactions for RNA: ENST00000539941.6

COPS3-212, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2 BASIC

Gene COPS3, Length 1,699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-212ENST00000539941 AMMECR1Q9Y4X0 333 aaPredicted RBP13.73□□□□□ -0.21
COPS3-212ENST00000539941 WSB1Q9Y6I7 421 aa13.73□□□□□ -0.21
COPS3-212ENST00000539941 MBP02144 154 aa13.72□□□□□ -0.21
COPS3-212ENST00000539941 AKR1C3P42330 323 aa13.72□□□□□ -0.21
COPS3-212ENST00000539941 RPL23AP62750 156 aaKnown RBP13.72□□□□□ -0.21
COPS3-212ENST00000539941 TNFRSF9Q07011 255 aa13.72□□□□□ -0.21
COPS3-212ENST00000539941 ETV3LQ6ZN32 361 aa13.72□□□□□ -0.21
COPS3-212ENST00000539941 PIMREGQ9BSJ6 248 aa13.72□□□□□ -0.21
COPS3-212ENST00000539941 MRPL20Q9BYC9 149 aaKnown RBP13.72□□□□□ -0.21
COPS3-212ENST00000539941 SMCO3A2RU48 225 aa13.72□□□□□ -0.21
COPS3-212ENST00000539941 SEC11BP0C7V7 166 aa13.72□□□□□ -0.21
COPS3-212ENST00000539941 LMO4P61968 165 aa13.72□□□□□ -0.21
COPS3-212ENST00000539941 BAXQ07812 192 aa13.72□□□□□ -0.21
COPS3-212ENST00000539941 Q8N7P7 452 aa13.72□□□□□ -0.21
COPS3-212ENST00000539941 CLDND2Q8NHS1 167 aa13.72□□□□□ -0.21
COPS3-212ENST00000539941 RNASEH2CQ8TDP1 164 aaKnown RBP13.72□□□□□ -0.21
COPS3-212ENST00000539941 FAM168AQ92567 244 aa13.72□□□□□ -0.21
COPS3-212ENST00000539941 NABP2Q9BQ15 211 aa13.72□□□□□ -0.21
COPS3-212ENST00000539941 FBXL17Q9UF56 701 aa13.72□□□□□ -0.21
COPS3-212ENST00000539941 ABCA12Q86UK0 2595 aa13.71□□□□□ -0.21
COPS3-212ENST00000539941 A8MWP6 167 aa13.71□□□□□ -0.21
COPS3-212ENST00000539941 H0YJW9 148 aa13.71□□□□□ -0.21
COPS3-212ENST00000539941 NXPH3O95157 252 aa13.71□□□□□ -0.21
COPS3-212ENST00000539941 PRTN3P24158 256 aa13.71□□□□□ -0.21
COPS3-212ENST00000539941 PAX9P55771 341 aa13.71□□□□□ -0.21
COPS3-212ENST00000539941 ATP5J2P56134 94 aa13.71□□□□□ -0.21
COPS3-212ENST00000539941 UBE2KP61086 200 aa13.71□□□□□ -0.21
COPS3-212ENST00000539941 EWSR1Q01844 656 aaKnown RBP eCLIP13.71□□□□□ -0.21
COPS3-212ENST00000539941 GAGE1Q13065 139 aa13.71□□□□□ -0.21
COPS3-212ENST00000539941 PDPNQ86YL7 162 aa13.71□□□□□ -0.21
COPS3-212ENST00000539941 ZNF295-AS1Q8N0V1 137 aa13.71□□□□□ -0.21
COPS3-212ENST00000539941 OSR1Q8TAX0 266 aaPredicted RBP13.71□□□□□ -0.21
COPS3-212ENST00000539941 TMEM140Q9NV12 185 aa13.71□□□□□ -0.21
COPS3-212ENST00000539941 CREBBPQ92793 2442 aa13.7□□□□□ -0.22
COPS3-212ENST00000539941 FAM24AA6NFZ4 105 aa13.7□□□□□ -0.22
COPS3-212ENST00000539941 TMEM50AO95807 157 aa13.7□□□□□ -0.22
COPS3-212ENST00000539941 LINC00614P0C842 121 aa13.7□□□□□ -0.22
COPS3-212ENST00000539941 ZNF674Q2M3X9 581 aa13.7□□□□□ -0.22
COPS3-212ENST00000539941 AKR1C8PQ5T2L2 129 aa13.7□□□□□ -0.22
COPS3-212ENST00000539941 CLEC2AQ6UVW9 174 aa13.7□□□□□ -0.22
COPS3-212ENST00000539941 TMEM252Q8N6L7 170 aa13.7□□□□□ -0.22
COPS3-212ENST00000539941 HSD17B11Q8NBQ5 300 aa13.7□□□□□ -0.22
COPS3-212ENST00000539941 OR11H6Q8NGC7 330 aa13.7□□□□□ -0.22
COPS3-212ENST00000539941 OR52E5Q8NH55 327 aa13.7□□□□□ -0.22
COPS3-212ENST00000539941 OR4A16Q8NH70 328 aa13.7□□□□□ -0.22
COPS3-212ENST00000539941 C10orf105Q8TEF2 133 aa13.7□□□□□ -0.22
COPS3-212ENST00000539941 CIB3Q96Q77 187 aaPredicted RBP13.7□□□□□ -0.22
COPS3-212ENST00000539941 TACC2O95359 2948 aa13.7□□□□□ -0.22
COPS3-212ENST00000539941 IGSF23A1L1A6 192 aa13.69□□□□□ -0.22
COPS3-212ENST00000539941 BUB1B-PAK6H3BSN5 160 aa13.69□□□□□ -0.22
COPS3-212ENST00000539941 M0QZK8 103 aa13.69□□□□□ -0.22
COPS3-212ENST00000539941 AGPAT2O15120 278 aa13.69□□□□□ -0.22
COPS3-212ENST00000539941 GGCTO75223 188 aaKnown RBP13.69□□□□□ -0.22
COPS3-212ENST00000539941 RBMXL2O75526 392 aaKnown RBP13.69□□□□□ -0.22
COPS3-212ENST00000539941 FOXH1O75593 365 aa13.69□□□□□ -0.22
COPS3-212ENST00000539941 OR9G9P0C7N8 305 aa13.69□□□□□ -0.22
COPS3-212ENST00000539941 MC5RP33032 325 aa13.69□□□□□ -0.22
COPS3-212ENST00000539941 ARF6P62330 175 aa13.69□□□□□ -0.22
COPS3-212ENST00000539941 PAX2Q02962 417 aa13.69□□□□□ -0.22
COPS3-212ENST00000539941 JOSD1Q15040 202 aaPredicted RBP13.69□□□□□ -0.22
COPS3-212ENST00000539941 TMEM177Q53S58 311 aa13.69□□□□□ -0.22
COPS3-212ENST00000539941 SPNS3Q6ZMD2 512 aa13.69□□□□□ -0.22
COPS3-212ENST00000539941 ACTR3CQ9C0K3 210 aaPredicted RBP13.69□□□□□ -0.22
COPS3-212ENST00000539941 EIF5A2Q9GZV4 153 aaKnown RBP13.69□□□□□ -0.22
COPS3-212ENST00000539941 ARV1Q9H2C2 271 aa13.69□□□□□ -0.22
COPS3-212ENST00000539941 RBKSQ9H477 322 aa13.69□□□□□ -0.22
COPS3-212ENST00000539941 AKAP6Q13023 2319 aa13.69□□□□□ -0.22
COPS3-212ENST00000539941 BORCS7-ASMTA0A0B4J1R7 106 aa13.69□□□□□ -0.22
COPS3-212ENST00000539941 IGHV2-70DA0A0C4DH43 119 aa13.69□□□□□ -0.22
COPS3-212ENST00000539941 VWC2LB2RUY7 222 aa13.69□□□□□ -0.22
COPS3-212ENST00000539941 METTL15P1P0C7V9 234 aa13.69□□□□□ -0.22
COPS3-212ENST00000539941 ZFP36P26651 326 aaKnown RBP13.69□□□□□ -0.22
COPS3-212ENST00000539941 DSCR9P59020 149 aa13.69□□□□□ -0.22
COPS3-212ENST00000539941 RELBQ01201 579 aa13.69□□□□□ -0.22
COPS3-212ENST00000539941 PDLIM3Q53GG5 364 aaPredicted RBP13.69□□□□□ -0.22
COPS3-212ENST00000539941 KHDC3LQ587J8 217 aa13.69□□□□□ -0.22
COPS3-212ENST00000539941 RPL7L1Q6DKI1 246 aaKnown RBP13.69□□□□□ -0.22
COPS3-212ENST00000539941 OR4A47Q6IF82 309 aa13.69□□□□□ -0.22
COPS3-212ENST00000539941 ZNF429Q86V71 674 aa13.69□□□□□ -0.22
COPS3-212ENST00000539941 OR4P4Q8NGL7 312 aa13.69□□□□□ -0.22
COPS3-212ENST00000539941 POLR3KQ9Y2Y1 108 aaPredicted RBP13.69□□□□□ -0.22
COPS3-212ENST00000539941 WASHC3Q9Y3C0 194 aa13.69□□□□□ -0.22
COPS3-212ENST00000539941 PDZD2O15018 2839 aa13.68□□□□□ -0.22
COPS3-212ENST00000539941 ARG1P05089 322 aa13.68□□□□□ -0.22
COPS3-212ENST00000539941 COX7A1P24310 79 aa13.68□□□□□ -0.22
COPS3-212ENST00000539941 REG1BP48304 166 aa13.68□□□□□ -0.22
COPS3-212ENST00000539941 PCP4P48539 62 aa13.68□□□□□ -0.22
COPS3-212ENST00000539941 DLK1P80370 383 aa13.68□□□□□ -0.22
COPS3-212ENST00000539941 SOHLH1Q5JUK2 328 aa13.68□□□□□ -0.22
COPS3-212ENST00000539941 PNKDQ8N490 385 aa13.68□□□□□ -0.22
COPS3-212ENST00000539941 OR4C13Q8NGP0 309 aa13.68□□□□□ -0.22
COPS3-212ENST00000539941 LHX4Q969G2 390 aa13.68□□□□□ -0.22
COPS3-212ENST00000539941 SCRT1Q9BWW7 348 aa13.68□□□□□ -0.22
COPS3-212ENST00000539941 PSENENQ9NZ42 101 aa13.68□□□□□ -0.22
COPS3-212ENST00000539941 PITPNC1Q9UKF7 332 aa13.68□□□□□ -0.22
COPS3-212ENST00000539941 C15orf61A6NNL5 157 aa13.67□□□□□ -0.22
COPS3-212ENST00000539941 B4DEV8 164 aa13.67□□□□□ -0.22
COPS3-212ENST00000539941 HIST1H2BKO60814 126 aa13.67□□□□□ -0.22
COPS3-212ENST00000539941 GCGP01275 180 aa13.67□□□□□ -0.22
COPS3-212ENST00000539941 IGKV1-16P04430 117 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 792.2 ms