RNA–Protein interactions for RNA: ENST00000539559.6

TMEM260-203, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 2,680 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-203ENST00000539559 SMIM21Q3B7S5 101 aa16.71■□□□□ 0.26
TMEM260-203ENST00000539559 PQLC2Q6ZP29 291 aa16.71■□□□□ 0.26
TMEM260-203ENST00000539559 V9GYV3 84 aa16.71■□□□□ 0.26
TMEM260-203ENST00000539559 BTF3P20290 206 aaKnown RBP16.7■□□□□ 0.26
TMEM260-203ENST00000539559 PAFAH1B2P68402 229 aa16.7■□□□□ 0.26
TMEM260-203ENST00000539559 PSG5Q15238 335 aa16.7■□□□□ 0.26
TMEM260-203ENST00000539559 CENPWQ5EE01 88 aa16.7■□□□□ 0.26
TMEM260-203ENST00000539559 TRIB1Q96RU8 372 aa16.7■□□□□ 0.26
TMEM260-203ENST00000539559 S1PR3Q99500 378 aa16.7■□□□□ 0.26
TMEM260-203ENST00000539559 NAT8BQ9UHF3 227 aa16.7■□□□□ 0.26
TMEM260-203ENST00000539559 ARFGEF3Q5TH69 2177 aa16.7■□□□□ 0.26
TMEM260-203ENST00000539559 DLEU1O43261 78 aa16.7■□□□□ 0.26
TMEM260-203ENST00000539559 PMCHP20382 165 aa16.7■□□□□ 0.26
TMEM260-203ENST00000539559 PRR7Q8TB68 274 aa16.7■□□□□ 0.26
TMEM260-203ENST00000539559 A0A1B0GWJ7 208 aa16.69■□□□□ 0.26
TMEM260-203ENST00000539559 CA2P00918 260 aa16.69■□□□□ 0.26
TMEM260-203ENST00000539559 BRS3P32247 399 aa16.69■□□□□ 0.26
TMEM260-203ENST00000539559 HTD2P86397 168 aa16.69■□□□□ 0.26
TMEM260-203ENST00000539559 TMEM183BQ1AE95 376 aa16.69■□□□□ 0.26
TMEM260-203ENST00000539559 FAM201AQ5SY85 155 aa16.69■□□□□ 0.26
TMEM260-203ENST00000539559 VWA1Q6PCB0 445 aa16.69■□□□□ 0.26
TMEM260-203ENST00000539559 TEPPQ6URK8 271 aa16.69■□□□□ 0.26
TMEM260-203ENST00000539559 WDR31Q8NA23 367 aa16.69■□□□□ 0.26
TMEM260-203ENST00000539559 OR2Z1Q8NG97 314 aa16.69■□□□□ 0.26
TMEM260-203ENST00000539559 C20orf144Q9BQM9 153 aa16.69■□□□□ 0.26
TMEM260-203ENST00000539559 ASCL3Q9NQ33 180 aa16.69■□□□□ 0.26
TMEM260-203ENST00000539559 GOLT1BQ9Y3E0 138 aa16.69■□□□□ 0.26
TMEM260-203ENST00000539559 DCHS1Q96JQ0 3298 aa16.69■□□□□ 0.26
TMEM260-203ENST00000539559 IGKV1D-17A0A075B6S4 117 aa16.69■□□□□ 0.26
TMEM260-203ENST00000539559 ADH4P08319 380 aa16.69■□□□□ 0.26
TMEM260-203ENST00000539559 OR10J4P0C629 311 aa16.69■□□□□ 0.26
TMEM260-203ENST00000539559 RHOBP62745 196 aa16.69■□□□□ 0.26
TMEM260-203ENST00000539559 UHRF2Q96PU4 802 aa16.69■□□□□ 0.26
TMEM260-203ENST00000539559 IFI27L2Q9H2X8 130 aa16.69■□□□□ 0.26
TMEM260-203ENST00000539559 LPAR2Q9HBW0 351 aa16.69■□□□□ 0.26
TMEM260-203ENST00000539559 CA1P00915 261 aaPredicted RBP16.68■□□□□ 0.26
TMEM260-203ENST00000539559 NPY1RP25929 384 aa16.68■□□□□ 0.26
TMEM260-203ENST00000539559 RANP62826 216 aaKnown RBP16.68■□□□□ 0.26
TMEM260-203ENST00000539559 PRR31Q5SQ13 230 aa16.68■□□□□ 0.26
TMEM260-203ENST00000539559 MRPL54Q6P161 138 aaKnown RBP16.68■□□□□ 0.26
TMEM260-203ENST00000539559 NHLRC2Q8NBF2 726 aa16.68■□□□□ 0.26
TMEM260-203ENST00000539559 J3QW42 95 aa16.68■□□□□ 0.26
TMEM260-203ENST00000539559 CECR9P0C854 216 aa16.68■□□□□ 0.26
TMEM260-203ENST00000539559 MLANAQ16655 118 aa16.68■□□□□ 0.26
TMEM260-203ENST00000539559 FAM90A1Q86YD7 464 aa16.68■□□□□ 0.26
TMEM260-203ENST00000539559 SIGLECL1Q8N7X8 197 aa16.68■□□□□ 0.26
TMEM260-203ENST00000539559 SLC24A4Q8NFF2 622 aa16.68■□□□□ 0.26
TMEM260-203ENST00000539559 GMPPAQ96IJ6 420 aaPredicted RBP16.68■□□□□ 0.26
TMEM260-203ENST00000539559 TBL2Q9Y4P3 447 aaKnown RBP16.68■□□□□ 0.26
TMEM260-203ENST00000539559 A8MXE2 369 aa16.67■□□□□ 0.26
TMEM260-203ENST00000539559 GNG4P50150 75 aa16.67■□□□□ 0.26
TMEM260-203ENST00000539559 TMPRSS3P57727 454 aa16.67■□□□□ 0.26
TMEM260-203ENST00000539559 LOXL3P58215 753 aa16.67■□□□□ 0.26
TMEM260-203ENST00000539559 AARDQ4LEZ3 155 aa16.67■□□□□ 0.26
TMEM260-203ENST00000539559 FAM19A2Q8N3H0 131 aa16.67■□□□□ 0.26
TMEM260-203ENST00000539559 TXNDC17Q9BRA2 123 aa16.67■□□□□ 0.26
TMEM260-203ENST00000539559 GCM1Q9NP62 436 aa16.67■□□□□ 0.26
TMEM260-203ENST00000539559 HELTA6NFD8 242 aa16.66■□□□□ 0.26
TMEM260-203ENST00000539559 AMTP48728 403 aa16.66■□□□□ 0.26
TMEM260-203ENST00000539559 Q8N976 141 aa16.66■□□□□ 0.26
TMEM260-203ENST00000539559 OPN3Q9H1Y3 402 aaPredicted RBP16.66■□□□□ 0.26
TMEM260-203ENST00000539559 TRGV10A0A0A0MS01 117 aa16.66■□□□□ 0.26
TMEM260-203ENST00000539559 NKX2-8O15522 239 aa16.66■□□□□ 0.26
TMEM260-203ENST00000539559 GPX1P07203 203 aa16.66■□□□□ 0.26
TMEM260-203ENST00000539559 OR4A47Q6IF82 309 aa16.66■□□□□ 0.26
TMEM260-203ENST00000539559 INO80CQ6PI98 192 aaPredicted RBP16.66■□□□□ 0.26
TMEM260-203ENST00000539559 PRSS33Q8NF86 280 aa16.66■□□□□ 0.26
TMEM260-203ENST00000539559 DIRC3C9JPN6 131 aa16.65■□□□□ 0.26
TMEM260-203ENST00000539559 ESDP10768 282 aa16.65■□□□□ 0.26
TMEM260-203ENST00000539559 MSMPQ1L6U9 139 aa16.65■□□□□ 0.26
TMEM260-203ENST00000539559 DUX4L9Q6RFH8 374 aaPredicted RBP16.65■□□□□ 0.26
TMEM260-203ENST00000539559 ZNRD1Q9P1U0 126 aa16.65■□□□□ 0.26
TMEM260-203ENST00000539559 LINC00869P0C866 280 aa16.65■□□□□ 0.26
TMEM260-203ENST00000539559 MGST1P10620 155 aaKnown RBP16.65■□□□□ 0.26
TMEM260-203ENST00000539559 MMDQ15546 238 aa16.65■□□□□ 0.26
TMEM260-203ENST00000539559 ATOH7Q8N100 152 aa16.65■□□□□ 0.26
TMEM260-203ENST00000539559 TMEM178AQ8NBL3 297 aa16.65■□□□□ 0.26
TMEM260-203ENST00000539559 OR52E5Q8NH55 327 aa16.65■□□□□ 0.26
TMEM260-203ENST00000539559 SERTAD4Q9NUC0 356 aa16.65■□□□□ 0.26
TMEM260-203ENST00000539559 INTS1Q8N201 2190 aaKnown RBP16.65■□□□□ 0.26
TMEM260-203ENST00000539559 ZNF891A8MT65 544 aaPredicted RBP16.64■□□□□ 0.26
TMEM260-203ENST00000539559 OR7C2O60412 319 aa16.64■□□□□ 0.26
TMEM260-203ENST00000539559 HOXC12P31275 282 aa16.64■□□□□ 0.26
TMEM260-203ENST00000539559 C11orf52Q96A22 123 aa16.64■□□□□ 0.26
TMEM260-203ENST00000539559 ZNF503Q96F45 646 aa16.64■□□□□ 0.26
TMEM260-203ENST00000539559 WNT10AQ9GZT5 417 aa16.64■□□□□ 0.26
TMEM260-203ENST00000539559 NRN1Q9NPD7 142 aa16.64■□□□□ 0.26
TMEM260-203ENST00000539559 YLPM1P49750 1951 aaKnown RBP16.64■□□□□ 0.25
TMEM260-203ENST00000539559 IGKV1OR2-108A0A075B7D4 117 aa16.64■□□□□ 0.25
TMEM260-203ENST00000539559 C15orf61A6NNL5 157 aa16.64■□□□□ 0.25
TMEM260-203ENST00000539559 M0QZK8 103 aa16.64■□□□□ 0.25
TMEM260-203ENST00000539559 SRIP30626 198 aa16.64■□□□□ 0.25
TMEM260-203ENST00000539559 Q6ZT83 130 aa16.64■□□□□ 0.25
TMEM260-203ENST00000539559 TRAV34A0A0B4J273 112 aa16.63■□□□□ 0.25
TMEM260-203ENST00000539559 C9JCJ5 164 aa16.63■□□□□ 0.25
TMEM260-203ENST00000539559 IGKV3-15P01624 115 aa16.63■□□□□ 0.25
TMEM260-203ENST00000539559 Q0VG73 95 aa16.63■□□□□ 0.25
TMEM260-203ENST00000539559 FAM214BQ7L5A3 538 aa16.63■□□□□ 0.25
TMEM260-203ENST00000539559 LINC00479Q96M42 142 aa16.63■□□□□ 0.25
TMEM260-203ENST00000539559 NABP2Q9BQ15 211 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms