RNA–Protein interactions for RNA: ENST00000538862.6

CDCA3-207, Transcript of cell division cycle associated 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDCA3, Length 1,943 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-207ENST00000538862 TIMM23BQ5SRD1 257 aa11.98□□□□□ -0.49
CDCA3-207ENST00000538862 KCNIP4Q6PIL6 250 aa11.98□□□□□ -0.49
CDCA3-207ENST00000538862 SEM1Q6ZVN7 128 aa11.98□□□□□ -0.49
CDCA3-207ENST00000538862 DOLPP1Q86YN1 238 aa11.98□□□□□ -0.49
CDCA3-207ENST00000538862 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.98□□□□□ -0.49
CDCA3-207ENST00000538862 OR4S2Q8NH73 311 aa11.98□□□□□ -0.49
CDCA3-207ENST00000538862 ACY3Q96HD9 319 aa11.98□□□□□ -0.49
CDCA3-207ENST00000538862 BTF3L4Q96K17 158 aa11.98□□□□□ -0.49
CDCA3-207ENST00000538862 OR2V2Q96R30 315 aa11.98□□□□□ -0.49
CDCA3-207ENST00000538862 PCGF1Q9BSM1 259 aa11.98□□□□□ -0.49
CDCA3-207ENST00000538862 PRDM13Q9H4Q3 707 aa11.98□□□□□ -0.49
CDCA3-207ENST00000538862 TMEM140Q9NV12 185 aa11.98□□□□□ -0.49
CDCA3-207ENST00000538862 GFOD1Q9NXC2 390 aa11.98□□□□□ -0.49
CDCA3-207ENST00000538862 IGHV3OR15-7A0A075B7D8 119 aa11.97□□□□□ -0.49
CDCA3-207ENST00000538862 TRAV38-1A0A0B4J264 116 aa11.97□□□□□ -0.49
CDCA3-207ENST00000538862 A6NJY4 79 aa11.97□□□□□ -0.49
CDCA3-207ENST00000538862 RRHO14718 337 aa11.97□□□□□ -0.49
CDCA3-207ENST00000538862 DEFA4P12838 97 aa11.97□□□□□ -0.49
CDCA3-207ENST00000538862 NDUFB7P17568 137 aa11.97□□□□□ -0.49
CDCA3-207ENST00000538862 GNB1P62873 340 aa11.97□□□□□ -0.49
CDCA3-207ENST00000538862 CDPF1Q6NVV7 123 aa11.97□□□□□ -0.49
CDCA3-207ENST00000538862 ZNRF1Q8ND25 227 aa11.97□□□□□ -0.49
CDCA3-207ENST00000538862 OR1P1Q8NH06 330 aa11.97□□□□□ -0.49
CDCA3-207ENST00000538862 RNASEH2CQ8TDP1 164 aaKnown RBP11.97□□□□□ -0.49
CDCA3-207ENST00000538862 TMEM170AQ8WVE7 144 aa11.97□□□□□ -0.49
CDCA3-207ENST00000538862 C14orf144Q96I85 54 aa11.97□□□□□ -0.49
CDCA3-207ENST00000538862 IMMP2LQ96T52 175 aa11.97□□□□□ -0.49
CDCA3-207ENST00000538862 MGST2Q99735 147 aa11.97□□□□□ -0.49
CDCA3-207ENST00000538862 ELOVL1Q9BW60 279 aa11.97□□□□□ -0.49
CDCA3-207ENST00000538862 NPVFQ9HCQ7 196 aa11.97□□□□□ -0.49
CDCA3-207ENST00000538862 TCF19Q9Y242 345 aa11.97□□□□□ -0.49
CDCA3-207ENST00000538862 A0A1W2PPQ1 181 aa11.96□□□□□ -0.49
CDCA3-207ENST00000538862 CRYAAP02489 173 aa11.96□□□□□ -0.49
CDCA3-207ENST00000538862 STAG3L2P0CL84 134 aa11.96□□□□□ -0.49
CDCA3-207ENST00000538862 STAG3L3P0CL85 134 aa11.96□□□□□ -0.49
CDCA3-207ENST00000538862 ZNF83P51522 516 aa11.96□□□□□ -0.49
CDCA3-207ENST00000538862 KLF3P57682 345 aaPredicted RBP11.96□□□□□ -0.49
CDCA3-207ENST00000538862 ADORA2A-AS1P86434 159 aa11.96□□□□□ -0.49
CDCA3-207ENST00000538862 GCSAMLQ5JQS6 135 aa11.96□□□□□ -0.49
CDCA3-207ENST00000538862 LINC01551Q86U37 167 aa11.96□□□□□ -0.49
CDCA3-207ENST00000538862 MOGAT3Q86VF5 341 aa11.96□□□□□ -0.49
CDCA3-207ENST00000538862 RPRMLQ8N4K4 120 aa11.96□□□□□ -0.49
CDCA3-207ENST00000538862 FAM57AQ8TBR7 257 aa11.96□□□□□ -0.49
CDCA3-207ENST00000538862 PLPPR2Q96GM1 343 aa11.96□□□□□ -0.49
CDCA3-207ENST00000538862 FAM234AQ9H0X4 552 aa11.96□□□□□ -0.49
CDCA3-207ENST00000538862 MS4A5Q9H3V2 200 aa11.96□□□□□ -0.49
CDCA3-207ENST00000538862 TET2Q6N021 2002 aaPredicted RBP11.96□□□□□ -0.5
CDCA3-207ENST00000538862 NAV2Q8IVL1 2488 aa11.96□□□□□ -0.5
CDCA3-207ENST00000538862 IGLV3-9A0A075B6K5 115 aa11.96□□□□□ -0.5
CDCA3-207ENST00000538862 TRAV3A0A0B4J244 114 aa11.96□□□□□ -0.5
CDCA3-207ENST00000538862 C15orf61A6NNL5 157 aa11.96□□□□□ -0.5
CDCA3-207ENST00000538862 DVL1O14640 695 aa11.96□□□□□ -0.5
CDCA3-207ENST00000538862 PRRG2O14669 202 aa11.96□□□□□ -0.5
CDCA3-207ENST00000538862 CXorf1O96002 111 aa11.96□□□□□ -0.5
CDCA3-207ENST00000538862 GATA4P43694 442 aa11.96□□□□□ -0.5
CDCA3-207ENST00000538862 PDLIM4P50479 330 aa11.96□□□□□ -0.5
CDCA3-207ENST00000538862 C17orf58Q2M2W7 97 aa11.96□□□□□ -0.5
CDCA3-207ENST00000538862 ACTL10Q5JWF8 245 aa11.96□□□□□ -0.5
CDCA3-207ENST00000538862 CST9LP1Q5W188 147 aa11.96□□□□□ -0.5
CDCA3-207ENST00000538862 VKORC1L1Q8N0U8 176 aa11.96□□□□□ -0.5
CDCA3-207ENST00000538862 ABHD12Q8N2K0 398 aa11.96□□□□□ -0.5
CDCA3-207ENST00000538862 OR5R1Q8NH85 324 aa11.96□□□□□ -0.5
CDCA3-207ENST00000538862 FAM222BQ8WU58 562 aa11.96□□□□□ -0.5
CDCA3-207ENST00000538862 GGTLC1Q9BX51 225 aa11.96□□□□□ -0.5
CDCA3-207ENST00000538862 LSM4Q9Y4Z0 139 aaKnown RBP11.96□□□□□ -0.5
CDCA3-207ENST00000538862 PXMP4Q9Y6I8 212 aa11.96□□□□□ -0.5
CDCA3-207ENST00000538862 CELSR2Q9HCU4 2923 aa11.95□□□□□ -0.5
CDCA3-207ENST00000538862 M0R1B8 84 aa11.95□□□□□ -0.5
CDCA3-207ENST00000538862 ATP5G3P48201 142 aa11.95□□□□□ -0.5
CDCA3-207ENST00000538862 THBS3P49746 956 aa11.95□□□□□ -0.5
CDCA3-207ENST00000538862 SPRNQ5BIV9 151 aa11.95□□□□□ -0.5
CDCA3-207ENST00000538862 ITLN2Q8WWU7 325 aaPredicted RBP11.95□□□□□ -0.5
CDCA3-207ENST00000538862 ADTRPQ96IZ2 230 aa11.95□□□□□ -0.5
CDCA3-207ENST00000538862 CHODLQ9H9P2 273 aa11.95□□□□□ -0.5
CDCA3-207ENST00000538862 PATZ1Q9HBE1 687 aaKnown RBP11.95□□□□□ -0.5
CDCA3-207ENST00000538862 FOXA2Q9Y261 457 aaPredicted RBP11.95□□□□□ -0.5
CDCA3-207ENST00000538862 UNC79Q9P2D8 2635 aa11.95□□□□□ -0.5
CDCA3-207ENST00000538862 KBTBD11-OT1A0A1B0GTJ5 212 aa11.94□□□□□ -0.5
CDCA3-207ENST00000538862 XKRY2A2RUG3 117 aa11.94□□□□□ -0.5
CDCA3-207ENST00000538862 NDUFB4O95168 129 aa11.94□□□□□ -0.5
CDCA3-207ENST00000538862 UBE2G2P60604 165 aa11.94□□□□□ -0.5
CDCA3-207ENST00000538862 HSPE1P61604 102 aaKnown RBP11.94□□□□□ -0.5
CDCA3-207ENST00000538862 CDSNQ15517 529 aa11.94□□□□□ -0.5
CDCA3-207ENST00000538862 CT45A1Q5HYN5 189 aa11.94□□□□□ -0.5
CDCA3-207ENST00000538862 C9orf152Q5JTZ5 239 aa11.94□□□□□ -0.5
CDCA3-207ENST00000538862 MIC13Q5XKP0 118 aa11.94□□□□□ -0.5
CDCA3-207ENST00000538862 CT45A3Q8NHU0 189 aa11.94□□□□□ -0.5
CDCA3-207ENST00000538862 ITLN1Q8WWA0 313 aa11.94□□□□□ -0.5
CDCA3-207ENST00000538862 ARL14EPLP0DKL9 152 aa11.94□□□□□ -0.5
CDCA3-207ENST00000538862 FOXL1Q12952 345 aa11.94□□□□□ -0.5
CDCA3-207ENST00000538862 JOSD1Q15040 202 aaPredicted RBP11.94□□□□□ -0.5
CDCA3-207ENST00000538862 ZNF474Q6S9Z5 364 aaPredicted RBP11.94□□□□□ -0.5
CDCA3-207ENST00000538862 C1orf229Q6ZS94 237 aaPredicted RBP11.94□□□□□ -0.5
CDCA3-207ENST00000538862 SDSLQ96GA7 329 aa11.94□□□□□ -0.5
CDCA3-207ENST00000538862 RHOVQ96L33 236 aa11.94□□□□□ -0.5
CDCA3-207ENST00000538862 TMEM14BQ9NUH8 114 aa11.94□□□□□ -0.5
CDCA3-207ENST00000538862 ADGRG4Q8IZF6 3080 aa11.93□□□□□ -0.5
CDCA3-207ENST00000538862 MAST4O15021 2626 aa11.93□□□□□ -0.5
CDCA3-207ENST00000538862 FNDC10F2Z333 226 aa11.93□□□□□ -0.5
CDCA3-207ENST00000538862 SPRY3O43610 288 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms