RNA–Protein interactions for RNA: ENST00000538136.1

MSH6-209, Transcript of mutS homolog 6, humanhuman

TSL 2 BASIC

Gene MSH6, Length 4,055 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-209ENST00000538136 SNRPGP15A8MWD9 76 aa5.8□□□□□ -1.48
MSH6-209ENST00000538136 OR9G9P0C7N8 305 aa5.8□□□□□ -1.48
MSH6-209ENST00000538136 HKR1P10072 659 aa5.8□□□□□ -1.48
MSH6-209ENST00000538136 GALP22466 123 aa5.8□□□□□ -1.48
MSH6-209ENST00000538136 NPBWR1P48145 328 aa5.8□□□□□ -1.48
MSH6-209ENST00000538136 LYG2Q86SG7 212 aa5.8□□□□□ -1.48
MSH6-209ENST00000538136 OR5B3Q8NH48 314 aa5.8□□□□□ -1.48
MSH6-209ENST00000538136 NAGKQ9UJ70 344 aa5.8□□□□□ -1.48
MSH6-209ENST00000538136 EXPH5Q8NEV8 1989 aa5.8□□□□□ -1.48
MSH6-209ENST00000538136 BOLA2-SMG1P6H3BVE0 249 aa5.79□□□□□ -1.48
MSH6-209ENST00000538136 SYNGR2O43760 224 aa5.79□□□□□ -1.48
MSH6-209ENST00000538136 CXCL3P19876 107 aa5.79□□□□□ -1.48
MSH6-209ENST00000538136 IGFL4Q6B9Z1 124 aa5.79□□□□□ -1.48
MSH6-209ENST00000538136 LIAT1Q6ZQX7 453 aa5.79□□□□□ -1.48
MSH6-209ENST00000538136 SLC25A48Q6ZT89 311 aaKnown RBP5.79□□□□□ -1.48
MSH6-209ENST00000538136 ASCL2Q99929 193 aa5.79□□□□□ -1.48
MSH6-209ENST00000538136 STAB2Q8WWQ8 2551 aa5.79□□□□□ -1.48
MSH6-209ENST00000538136 FAM90A10PA6NDY2 464 aa5.79□□□□□ -1.48
MSH6-209ENST00000538136 FAM90A18PA6NE21 464 aa5.79□□□□□ -1.48
MSH6-209ENST00000538136 FAM90A16PA6NEW6 464 aa5.79□□□□□ -1.48
MSH6-209ENST00000538136 FAM90A20PA6NIJ5 464 aa5.79□□□□□ -1.48
MSH6-209ENST00000538136 FAM90A8PA6NJQ4 464 aa5.79□□□□□ -1.48
MSH6-209ENST00000538136 FAM90A7PA6NKC0 464 aa5.79□□□□□ -1.48
MSH6-209ENST00000538136 FAM90A22PA8MWA6 464 aa5.79□□□□□ -1.48
MSH6-209ENST00000538136 FAM90A12PA8MX19 464 aa5.79□□□□□ -1.48
MSH6-209ENST00000538136 FAM90A5PA8MXJ8 464 aa5.79□□□□□ -1.48
MSH6-209ENST00000538136 FAM90A23PA8MXZ1 464 aa5.79□□□□□ -1.48
MSH6-209ENST00000538136 H0YJW9 148 aa5.79□□□□□ -1.48
MSH6-209ENST00000538136 CRLF1O75462 422 aa5.79□□□□□ -1.48
MSH6-209ENST00000538136 MT-CO2P00403 227 aa5.79□□□□□ -1.48
MSH6-209ENST00000538136 FGF2P09038 288 aa5.79□□□□□ -1.48
MSH6-209ENST00000538136 FAM90A15PP0C7V4 464 aa5.79□□□□□ -1.48
MSH6-209ENST00000538136 FAM90A13PP0C7W8 464 aa5.79□□□□□ -1.48
MSH6-209ENST00000538136 FAM90A14PP0C7W9 464 aa5.79□□□□□ -1.48
MSH6-209ENST00000538136 FAM90A24PP0C7X0 464 aa5.79□□□□□ -1.48
MSH6-209ENST00000538136 RPL35AP18077 110 aaKnown RBP5.79□□□□□ -1.48
MSH6-209ENST00000538136 RAB14P61106 215 aa5.79□□□□□ -1.48
MSH6-209ENST00000538136 ZNF674Q2M3X9 581 aa5.79□□□□□ -1.48
MSH6-209ENST00000538136 OXLD1Q5BKU9 147 aa5.79□□□□□ -1.48
MSH6-209ENST00000538136 FAM89BQ8N5H3 189 aa5.79□□□□□ -1.48
MSH6-209ENST00000538136 OR5C1Q8NGR4 320 aa5.79□□□□□ -1.48
MSH6-209ENST00000538136 AIFM2Q9BRQ8 373 aa5.79□□□□□ -1.48
MSH6-209ENST00000538136 NDUFB6O95139 128 aa5.79□□□□□ -1.48
MSH6-209ENST00000538136 IL4P05112 153 aa5.79□□□□□ -1.48
MSH6-209ENST00000538136 CD28P10747 220 aa5.79□□□□□ -1.48
MSH6-209ENST00000538136 HLA-GP17693 338 aa5.79□□□□□ -1.48
MSH6-209ENST00000538136 RUNX1Q01196 453 aa5.79□□□□□ -1.48
MSH6-209ENST00000538136 NHLH2Q02577 135 aa5.79□□□□□ -1.48
MSH6-209ENST00000538136 FAM122CQ6P4D5 195 aa5.79□□□□□ -1.48
MSH6-209ENST00000538136 LRRC75A-AS1Q8N1F1 130 aa5.79□□□□□ -1.48
MSH6-209ENST00000538136 MITD1Q8WV92 249 aa5.79□□□□□ -1.48
MSH6-209ENST00000538136 UHRF2Q96PU4 802 aa5.79□□□□□ -1.48
MSH6-209ENST00000538136 BCL7BQ9BQE9 202 aa5.79□□□□□ -1.48
MSH6-209ENST00000538136 KAAG1Q9UBP8 84 aa5.79□□□□□ -1.48
MSH6-209ENST00000538136 PKD1L1Q8TDX9 2849 aa5.79□□□□□ -1.48
MSH6-209ENST00000538136 AMY1AP04745 511 aa5.79□□□□□ -1.48
MSH6-209ENST00000538136 CTSDP07339 412 aaPredicted RBP5.79□□□□□ -1.48
MSH6-209ENST00000538136 OR10J4P0C629 311 aa5.79□□□□□ -1.48
MSH6-209ENST00000538136 QRFPP83859 136 aa5.79□□□□□ -1.48
MSH6-209ENST00000538136 LDLRAD2Q5SZI1 272 aa5.79□□□□□ -1.48
MSH6-209ENST00000538136 OR4A5Q8NH83 315 aa5.79□□□□□ -1.48
MSH6-209ENST00000538136 OR5R1Q8NH85 324 aa5.79□□□□□ -1.48
MSH6-209ENST00000538136 FAM213BQ8TBF2 198 aa5.79□□□□□ -1.48
MSH6-209ENST00000538136 OR10C1Q96KK4 312 aa5.79□□□□□ -1.48
MSH6-209ENST00000538136 DBX1A6NMT0 343 aa5.78□□□□□ -1.48
MSH6-209ENST00000538136 SFT2D2O95562 160 aa5.78□□□□□ -1.48
MSH6-209ENST00000538136 IGLV3-1P01715 115 aa5.78□□□□□ -1.48
MSH6-209ENST00000538136 FGF7P21781 194 aa5.78□□□□□ -1.48
MSH6-209ENST00000538136 CD300CQ08708 224 aa5.78□□□□□ -1.48
MSH6-209ENST00000538136 AKR1C8PQ5T2L2 129 aa5.78□□□□□ -1.48
MSH6-209ENST00000538136 TEX38Q6PEX7 206 aa5.78□□□□□ -1.48
MSH6-209ENST00000538136 PRSS57Q6UWY2 283 aa5.78□□□□□ -1.48
MSH6-209ENST00000538136 ALKAL2Q6UX46 152 aa5.78□□□□□ -1.48
MSH6-209ENST00000538136 SLC24A4Q8NFF2 622 aa5.78□□□□□ -1.48
MSH6-209ENST00000538136 ZNF48Q96MX3 618 aaPredicted RBP5.78□□□□□ -1.48
MSH6-209ENST00000538136 UBQLN2Q9UHD9 624 aa5.78□□□□□ -1.48
MSH6-209ENST00000538136 C15orf65H3BRN8 121 aa5.78□□□□□ -1.48
MSH6-209ENST00000538136 ZNF701M0R085 212 aaPredicted RBP5.78□□□□□ -1.48
MSH6-209ENST00000538136 COX7A2P2O60397 106 aa5.78□□□□□ -1.48
MSH6-209ENST00000538136 CD1AP06126 327 aa5.78□□□□□ -1.48
MSH6-209ENST00000538136 SLC25A6P12236 298 aa5.78□□□□□ -1.48
MSH6-209ENST00000538136 ARL3P36405 182 aa5.78□□□□□ -1.48
MSH6-209ENST00000538136 UBE2KP61086 200 aa5.78□□□□□ -1.48
MSH6-209ENST00000538136 PAX8Q06710 450 aa5.78□□□□□ -1.48
MSH6-209ENST00000538136 HMGN3Q15651 99 aa5.78□□□□□ -1.48
MSH6-209ENST00000538136 C18orf65Q6ZTR6 163 aa5.78□□□□□ -1.48
MSH6-209ENST00000538136 CACNG8Q8WXS5 425 aa5.78□□□□□ -1.48
MSH6-209ENST00000538136 SIRPDQ9H106 197 aa5.78□□□□□ -1.48
MSH6-209ENST00000538136 PRNDQ9UKY0 176 aa5.78□□□□□ -1.48
MSH6-209ENST00000538136 OR10J1P30954 320 aa5.78□□□□□ -1.48
MSH6-209ENST00000538136 FXYD7P58549 80 aa5.78□□□□□ -1.48
MSH6-209ENST00000538136 HSPE1P61604 102 aaKnown RBP5.78□□□□□ -1.48
MSH6-209ENST00000538136 RPP30P78346 268 aaKnown RBP5.78□□□□□ -1.48
MSH6-209ENST00000538136 TCF23Q7RTU1 214 aa5.78□□□□□ -1.48
MSH6-209ENST00000538136 OR4X1Q8NH49 305 aa5.78□□□□□ -1.48
MSH6-209ENST00000538136 CITED4Q96RK1 184 aa5.78□□□□□ -1.48
MSH6-209ENST00000538136 GPR132Q9UNW8 380 aa5.78□□□□□ -1.48
MSH6-209ENST00000538136 PUS1Q9Y606 427 aaKnown RBP eCLIP5.78□□□□□ -1.48
MSH6-209ENST00000538136 TET2Q6N021 2002 aaPredicted RBP5.77□□□□□ -1.49
MSH6-209ENST00000538136 J3QLI3 93 aa5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 100.5 ms