RNA–Protein interactions for RNA: ENST00000538064.1

LRRK1-211, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 5

Gene LRRK1, Length 493 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-211ENST00000538064 DEDD2Q8WXF8 326 aa11.36□□□□□ -0.59
LRRK1-211ENST00000538064 SCGB3A2Q96PL1 93 aa11.36□□□□□ -0.59
LRRK1-211ENST00000538064 RCHY1Q96PM5 261 aa11.36□□□□□ -0.59
LRRK1-211ENST00000538064 SLC2A9Q9NRM0 540 aa11.36□□□□□ -0.59
LRRK1-211ENST00000538064 MCUBQ9NWR8 336 aa11.36□□□□□ -0.59
LRRK1-211ENST00000538064 COMMD9Q9P000 198 aa11.36□□□□□ -0.59
LRRK1-211ENST00000538064 DYNC2H1Q8NCM8 4307 aaKnown RBP11.36□□□□□ -0.59
LRRK1-211ENST00000538064 HMX3A6NHT5 357 aa11.35□□□□□ -0.59
LRRK1-211ENST00000538064 A8MZ25 164 aa11.35□□□□□ -0.59
LRRK1-211ENST00000538064 OR2J3O76001 311 aa11.35□□□□□ -0.59
LRRK1-211ENST00000538064 IL6RP08887 468 aaPredicted RBP11.35□□□□□ -0.59
LRRK1-211ENST00000538064 IGHV4-30-4P0DP06 118 aa11.35□□□□□ -0.59
LRRK1-211ENST00000538064 INPP1P49441 399 aa11.35□□□□□ -0.59
LRRK1-211ENST00000538064 ERVK-16P61578 105 aa11.35□□□□□ -0.59
LRRK1-211ENST00000538064 RND3P61587 244 aa11.35□□□□□ -0.59
LRRK1-211ENST00000538064 RPL8P62917 257 aaKnown RBP11.35□□□□□ -0.59
LRRK1-211ENST00000538064 C15orf32Q32M92 178 aa11.35□□□□□ -0.59
LRRK1-211ENST00000538064 OR4A5Q8NH83 315 aa11.35□□□□□ -0.59
LRRK1-211ENST00000538064 TRIM63Q969Q1 353 aa11.35□□□□□ -0.59
LRRK1-211ENST00000538064 SRRQ9GZT4 340 aa11.35□□□□□ -0.59
LRRK1-211ENST00000538064 FAM212BQ9NTI7 297 aaPredicted RBP11.35□□□□□ -0.59
LRRK1-211ENST00000538064 SLC2A8Q9NY64 477 aa11.35□□□□□ -0.59
LRRK1-211ENST00000538064 BET1LQ9NYM9 111 aa11.35□□□□□ -0.59
LRRK1-211ENST00000538064 COPZ2Q9P299 210 aa11.35□□□□□ -0.59
LRRK1-211ENST00000538064 PEMTQ9UBM1 199 aa11.35□□□□□ -0.59
LRRK1-211ENST00000538064 C14orf166Q9Y224 244 aaKnown RBP11.35□□□□□ -0.59
LRRK1-211ENST00000538064 A0A1B0GW64 132 aa11.34□□□□□ -0.59
LRRK1-211ENST00000538064 S1PR2O95136 353 aa11.34□□□□□ -0.59
LRRK1-211ENST00000538064 CTSDP07339 412 aaPredicted RBP11.34□□□□□ -0.59
LRRK1-211ENST00000538064 HLA-GP17693 338 aa11.34□□□□□ -0.59
LRRK1-211ENST00000538064 LPAR6P43657 344 aa11.34□□□□□ -0.59
LRRK1-211ENST00000538064 PIGPP57054 158 aa11.34□□□□□ -0.59
LRRK1-211ENST00000538064 KLF9Q13886 244 aaPredicted RBP11.34□□□□□ -0.59
LRRK1-211ENST00000538064 POU2AF1Q16633 256 aa11.34□□□□□ -0.59
LRRK1-211ENST00000538064 CNPY1Q3B7I2 92 aa11.34□□□□□ -0.59
LRRK1-211ENST00000538064 TRIQKQ629K1 86 aa11.34□□□□□ -0.59
LRRK1-211ENST00000538064 OR4A47Q6IF82 309 aa11.34□□□□□ -0.59
LRRK1-211ENST00000538064 LCN12Q6JVE5 192 aa11.34□□□□□ -0.59
LRRK1-211ENST00000538064 C19orf35Q6ZS72 473 aa11.34□□□□□ -0.59
LRRK1-211ENST00000538064 LINC00299Q6ZSB3 139 aa11.34□□□□□ -0.59
LRRK1-211ENST00000538064 SSX9Q7RTT3 188 aa11.34□□□□□ -0.59
LRRK1-211ENST00000538064 DMBX1Q8NFW5 382 aa11.34□□□□□ -0.59
LRRK1-211ENST00000538064 OR51S1Q8NGJ8 323 aa11.34□□□□□ -0.59
LRRK1-211ENST00000538064 OR13C8Q8NGS7 320 aa11.34□□□□□ -0.59
LRRK1-211ENST00000538064 MARCH1Q8TCQ1 289 aa11.34□□□□□ -0.59
LRRK1-211ENST00000538064 FYTTD1Q96QD9 318 aaKnown RBP11.34□□□□□ -0.59
LRRK1-211ENST00000538064 ZMAT4Q9H898 229 aa11.34□□□□□ -0.59
LRRK1-211ENST00000538064 HRASLSQ9HDD0 168 aa11.34□□□□□ -0.59
LRRK1-211ENST00000538064 C19orf73Q9NVV2 129 aa11.34□□□□□ -0.59
LRRK1-211ENST00000538064 E7EUB6 86 aa11.33□□□□□ -0.6
LRRK1-211ENST00000538064 C3orf84H3BNL1 204 aa11.33□□□□□ -0.6
LRRK1-211ENST00000538064 SERPINE2P07093 398 aa11.33□□□□□ -0.6
LRRK1-211ENST00000538064 CRYGCP07315 174 aa11.33□□□□□ -0.6
LRRK1-211ENST00000538064 PI3P19957 117 aa11.33□□□□□ -0.6
LRRK1-211ENST00000538064 PSMB6P28072 239 aa11.33□□□□□ -0.6
LRRK1-211ENST00000538064 KLK9Q2XQG4 91 aa11.33□□□□□ -0.6
LRRK1-211ENST00000538064 ZNF57Q68EA5 555 aaPredicted RBP11.33□□□□□ -0.6
LRRK1-211ENST00000538064 OR2K2Q8NGT1 345 aa11.33□□□□□ -0.6
LRRK1-211ENST00000538064 TM2D3Q9BRN9 247 aa11.33□□□□□ -0.6
LRRK1-211ENST00000538064 KLK9Q9UKQ9 250 aa11.33□□□□□ -0.6
LRRK1-211ENST00000538064 B3GALNT1O75752 331 aa11.32□□□□□ -0.6
LRRK1-211ENST00000538064 DHFRP00374 187 aa11.32□□□□□ -0.6
LRRK1-211ENST00000538064 FGF2P09038 288 aa11.32□□□□□ -0.6
LRRK1-211ENST00000538064 AREGP15514 252 aa11.32□□□□□ -0.6
LRRK1-211ENST00000538064 RPA2P15927 270 aa11.32□□□□□ -0.6
LRRK1-211ENST00000538064 CTRB1P17538 263 aa11.32□□□□□ -0.6
LRRK1-211ENST00000538064 MECP2P51608 486 aaKnown RBP11.32□□□□□ -0.6
LRRK1-211ENST00000538064 ZNF585BQ52M93 769 aa11.32□□□□□ -0.6
LRRK1-211ENST00000538064 CTRB2Q6GPI1 263 aa11.32□□□□□ -0.6
LRRK1-211ENST00000538064 GTSCR1Q86UQ5 136 aa11.32□□□□□ -0.6
LRRK1-211ENST00000538064 FANCD2OSQ96PS1 177 aa11.32□□□□□ -0.6
LRRK1-211ENST00000538064 TMEM140Q9NV12 185 aa11.32□□□□□ -0.6
LRRK1-211ENST00000538064 FBXL7Q9UJT9 491 aa11.32□□□□□ -0.6
LRRK1-211ENST00000538064 GPR132Q9UNW8 380 aa11.32□□□□□ -0.6
LRRK1-211ENST00000538064 DMRT1Q9Y5R6 373 aa11.32□□□□□ -0.6
LRRK1-211ENST00000538064 C3orf85A0A1B0GTC6 90 aa11.31□□□□□ -0.6
LRRK1-211ENST00000538064 CGB1A6NKQ9 187 aa11.31□□□□□ -0.6
LRRK1-211ENST00000538064 MARCH11A6NNE9 402 aa11.31□□□□□ -0.6
LRRK1-211ENST00000538064 PPP5D1E7EU14 171 aa11.31□□□□□ -0.6
LRRK1-211ENST00000538064 UPK2O00526 184 aa11.31□□□□□ -0.6
LRRK1-211ENST00000538064 GGCTO75223 188 aaKnown RBP11.31□□□□□ -0.6
LRRK1-211ENST00000538064 ATG12O94817 140 aa11.31□□□□□ -0.6
LRRK1-211ENST00000538064 KRASP01116 189 aa11.31□□□□□ -0.6
LRRK1-211ENST00000538064 MYOD1P15172 320 aa11.31□□□□□ -0.6
LRRK1-211ENST00000538064 HIST1H1BP16401 226 aaKnown RBP11.31□□□□□ -0.6
LRRK1-211ENST00000538064 OR2B8PP59922 312 aa11.31□□□□□ -0.6
LRRK1-211ENST00000538064 CADM3Q8N126 398 aa11.31□□□□□ -0.6
LRRK1-211ENST00000538064 MRGPRFQ96AM1 343 aa11.31□□□□□ -0.6
LRRK1-211ENST00000538064 CCDC140Q96MF4 163 aa11.31□□□□□ -0.6
LRRK1-211ENST00000538064 IGLV11-55A0A075B6I3 123 aa11.3□□□□□ -0.6
LRRK1-211ENST00000538064 TEX13DA0A0J9YY54 714 aaPredicted RBP11.3□□□□□ -0.6
LRRK1-211ENST00000538064 IZUMO1RA6ND01 250 aa11.3□□□□□ -0.6
LRRK1-211ENST00000538064 SNAPC5O75971 98 aa11.3□□□□□ -0.6
LRRK1-211ENST00000538064 NDUFB8O95169 186 aa11.3□□□□□ -0.6
LRRK1-211ENST00000538064 BAK1Q16611 211 aa11.3□□□□□ -0.6
LRRK1-211ENST00000538064 ADAMTSL5Q6ZMM2 481 aa11.3□□□□□ -0.6
LRRK1-211ENST00000538064 MUC7Q8TAX7 377 aa11.3□□□□□ -0.6
LRRK1-211ENST00000538064 S100ZQ8WXG8 99 aa11.3□□□□□ -0.6
LRRK1-211ENST00000538064 EEF1AKMT3Q96AZ1 226 aa11.3□□□□□ -0.6
LRRK1-211ENST00000538064 TSC22D3Q99576 134 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms