RNA–Protein interactions for RNA: ENST00000536483.1

PRKDC-207, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 834 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-207ENST00000536483 SMIM4Q8WVI0 70 aa9.52□□□□□ -0.89
PRKDC-207ENST00000536483 TRIM63Q969Q1 353 aa9.52□□□□□ -0.89
PRKDC-207ENST00000536483 ZMAT4Q9H898 229 aa9.52□□□□□ -0.89
PRKDC-207ENST00000536483 ZNF355PQ9NSJ1 428 aa9.52□□□□□ -0.89
PRKDC-207ENST00000536483 SIGLEC8Q9NYZ4 499 aa9.52□□□□□ -0.89
PRKDC-207ENST00000536483 PEF1Q9UBV8 284 aaKnown RBP9.52□□□□□ -0.89
PRKDC-207ENST00000536483 LYSTQ99698 3801 aa9.52□□□□□ -0.89
PRKDC-207ENST00000536483 CGB1A6NKQ9 187 aa9.51□□□□□ -0.89
PRKDC-207ENST00000536483 GABARAPH6UMI1 98 aa9.51□□□□□ -0.89
PRKDC-207ENST00000536483 GPR31O00270 319 aa9.51□□□□□ -0.89
PRKDC-207ENST00000536483 UPK2O00526 184 aa9.51□□□□□ -0.89
PRKDC-207ENST00000536483 TNFSF12O43508 249 aa9.51□□□□□ -0.89
PRKDC-207ENST00000536483 FCER2P06734 321 aa9.51□□□□□ -0.89
PRKDC-207ENST00000536483 HLA-GP17693 338 aa9.51□□□□□ -0.89
PRKDC-207ENST00000536483 TBPP20226 339 aa9.51□□□□□ -0.89
PRKDC-207ENST00000536483 RPL27AP46776 148 aaKnown RBP9.51□□□□□ -0.89
PRKDC-207ENST00000536483 C10orf55Q5SWW7 151 aa9.51□□□□□ -0.89
PRKDC-207ENST00000536483 AADACL3Q5VUY0 350 aa9.51□□□□□ -0.89
PRKDC-207ENST00000536483 ZNF57Q68EA5 555 aaPredicted RBP9.51□□□□□ -0.89
PRKDC-207ENST00000536483 TMEM17Q86X19 198 aa9.51□□□□□ -0.89
PRKDC-207ENST00000536483 CMTM1Q8IZ96 169 aa9.51□□□□□ -0.89
PRKDC-207ENST00000536483 ABHD1Q96SE0 405 aa9.51□□□□□ -0.89
PRKDC-207ENST00000536483 PHB2Q99623 299 aa9.51□□□□□ -0.89
PRKDC-207ENST00000536483 RSRP1Q9BUV0 290 aa9.51□□□□□ -0.89
PRKDC-207ENST00000536483 FXYD6Q9H0Q3 95 aa9.51□□□□□ -0.89
PRKDC-207ENST00000536483 COA4Q9NYJ1 87 aa9.51□□□□□ -0.89
PRKDC-207ENST00000536483 MTFP1Q9UDX5 166 aa9.51□□□□□ -0.89
PRKDC-207ENST00000536483 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.5□□□□□ -0.89
PRKDC-207ENST00000536483 CTRB1P17538 263 aa9.5□□□□□ -0.89
PRKDC-207ENST00000536483 RHOGP84095 191 aa9.5□□□□□ -0.89
PRKDC-207ENST00000536483 ZNF585BQ52M93 769 aa9.5□□□□□ -0.89
PRKDC-207ENST00000536483 ZFAND6Q6FIF0 208 aa9.5□□□□□ -0.89
PRKDC-207ENST00000536483 CTRB2Q6GPI1 263 aa9.5□□□□□ -0.89
PRKDC-207ENST00000536483 THOC7Q6I9Y2 204 aaKnown RBP9.5□□□□□ -0.89
PRKDC-207ENST00000536483 IL34Q6ZMJ4 242 aa9.5□□□□□ -0.89
PRKDC-207ENST00000536483 LHFPL1Q86WI0 220 aa9.5□□□□□ -0.89
PRKDC-207ENST00000536483 TOMM5Q8N4H5 51 aa9.5□□□□□ -0.89
PRKDC-207ENST00000536483 ARRDC1Q8N5I2 433 aa9.5□□□□□ -0.89
PRKDC-207ENST00000536483 FANCD2OSQ96PS1 177 aa9.5□□□□□ -0.89
PRKDC-207ENST00000536483 FYTTD1Q96QD9 318 aaKnown RBP9.5□□□□□ -0.89
PRKDC-207ENST00000536483 KLK11Q9UBX7 282 aa9.5□□□□□ -0.89
PRKDC-207ENST00000536483 DMRT1Q9Y5R6 373 aa9.5□□□□□ -0.89
PRKDC-207ENST00000536483 CSMD3Q7Z407 3707 aa9.5□□□□□ -0.89
PRKDC-207ENST00000536483 LCE6AA0A183 80 aa9.49□□□□□ -0.89
PRKDC-207ENST00000536483 MPPED1O15442 326 aa9.49□□□□□ -0.89
PRKDC-207ENST00000536483 DHFRP00374 187 aa9.49□□□□□ -0.89
PRKDC-207ENST00000536483 IGLV1-51P01701 117 aa9.49□□□□□ -0.89
PRKDC-207ENST00000536483 CD74P04233 296 aa9.49□□□□□ -0.89
PRKDC-207ENST00000536483 PSMB6P28072 239 aa9.49□□□□□ -0.89
PRKDC-207ENST00000536483 MECP2P51608 486 aaKnown RBP9.49□□□□□ -0.89
PRKDC-207ENST00000536483 OR2B8PP59922 312 aa9.49□□□□□ -0.89
PRKDC-207ENST00000536483 ATP5G2Q06055 141 aa9.49□□□□□ -0.89
PRKDC-207ENST00000536483 HSD17B13Q7Z5P4 300 aaPredicted RBP9.49□□□□□ -0.89
PRKDC-207ENST00000536483 OR51H1Q8NH63 302 aa9.49□□□□□ -0.89
PRKDC-207ENST00000536483 FCAMRQ8WWV6 532 aa9.49□□□□□ -0.89
PRKDC-207ENST00000536483 ZNF486Q96H40 463 aaPredicted RBP9.49□□□□□ -0.89
PRKDC-207ENST00000536483 CITED4Q96RK1 184 aa9.49□□□□□ -0.89
PRKDC-207ENST00000536483 ELOVL1Q9BW60 279 aa9.49□□□□□ -0.89
PRKDC-207ENST00000536483 TMEM140Q9NV12 185 aa9.49□□□□□ -0.89
PRKDC-207ENST00000536483 IGLC7A0M8Q6 106 aa9.48□□□□□ -0.89
PRKDC-207ENST00000536483 MARCH11A6NNE9 402 aa9.48□□□□□ -0.89
PRKDC-207ENST00000536483 CCNKO75909 580 aa9.48□□□□□ -0.89
PRKDC-207ENST00000536483 S1PR2O95136 353 aa9.48□□□□□ -0.89
PRKDC-207ENST00000536483 RLN1P04808 185 aa9.48□□□□□ -0.89
PRKDC-207ENST00000536483 APELAP0DMC3 54 aa9.48□□□□□ -0.89
PRKDC-207ENST00000536483 HIST1H1BP16401 226 aaKnown RBP9.48□□□□□ -0.89
PRKDC-207ENST00000536483 FAUP35544 74 aaKnown RBP9.48□□□□□ -0.89
PRKDC-207ENST00000536483 EIF2B2P49770 351 aaKnown RBP9.48□□□□□ -0.89
PRKDC-207ENST00000536483 RND3P61587 244 aa9.48□□□□□ -0.89
PRKDC-207ENST00000536483 TSPAN5P62079 268 aa9.48□□□□□ -0.89
PRKDC-207ENST00000536483 SSX9Q7RTT3 188 aa9.48□□□□□ -0.89
PRKDC-207ENST00000536483 HAPLN4Q86UW8 402 aa9.48□□□□□ -0.89
PRKDC-207ENST00000536483 SLC38A6Q8IZM9 456 aa9.48□□□□□ -0.89
PRKDC-207ENST00000536483 OR9G4Q8NGQ1 327 aa9.48□□□□□ -0.89
PRKDC-207ENST00000536483 OR52I2Q8NH67 350 aa9.48□□□□□ -0.89
PRKDC-207ENST00000536483 OR4C12Q96R67 309 aa9.48□□□□□ -0.89
PRKDC-207ENST00000536483 TM2D3Q9BRN9 247 aa9.48□□□□□ -0.89
PRKDC-207ENST00000536483 HYDINQ4G0P3 5121 aa9.48□□□□□ -0.89
PRKDC-207ENST00000536483 IGLV11-55A0A075B6I3 123 aa9.47□□□□□ -0.89
PRKDC-207ENST00000536483 TRAV3A0A0B4J244 114 aa9.47□□□□□ -0.89
PRKDC-207ENST00000536483 ANKRD34BA5PLL1 514 aa9.47□□□□□ -0.89
PRKDC-207ENST00000536483 INMT-MINDY4F8WBC2 141 aa9.47□□□□□ -0.89
PRKDC-207ENST00000536483 BOLA2-SMG1P6H3BVE0 249 aa9.47□□□□□ -0.89
PRKDC-207ENST00000536483 BMPR1BO00238 502 aa9.47□□□□□ -0.89
PRKDC-207ENST00000536483 TRBV12-3P01733 135 aa9.47□□□□□ -0.89
PRKDC-207ENST00000536483 PRH1P02810 166 aa9.47□□□□□ -0.89
PRKDC-207ENST00000536483 IGHV4-30-4P0DP06 118 aa9.47□□□□□ -0.89
PRKDC-207ENST00000536483 AREGP15514 252 aa9.47□□□□□ -0.89
PRKDC-207ENST00000536483 LPAR6P43657 344 aa9.47□□□□□ -0.89
PRKDC-207ENST00000536483 KLF9Q13886 244 aaPredicted RBP9.47□□□□□ -0.89
PRKDC-207ENST00000536483 TATDN3Q17R31 274 aa9.47□□□□□ -0.89
PRKDC-207ENST00000536483 C15orf32Q32M92 178 aa9.47□□□□□ -0.89
PRKDC-207ENST00000536483 Q8N1Y9 231 aa9.47□□□□□ -0.89
PRKDC-207ENST00000536483 ZBTB8BQ8NAP8 495 aaPredicted RBP9.47□□□□□ -0.89
PRKDC-207ENST00000536483 TMEM229BQ8NBD8 167 aa9.47□□□□□ -0.89
PRKDC-207ENST00000536483 QTRT1Q9BXR0 403 aaKnown RBP9.47□□□□□ -0.89
PRKDC-207ENST00000536483 COMMD5Q9GZQ3 224 aa9.47□□□□□ -0.89
PRKDC-207ENST00000536483 HRASLSQ9HDD0 168 aa9.47□□□□□ -0.89
PRKDC-207ENST00000536483 NDUFA4L2Q9NRX3 87 aa9.47□□□□□ -0.89
PRKDC-207ENST00000536483 TEX50A0A1B0GTY4 177 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms